RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CDCA7LQ96GN5 454 aa26.09■■□□□ 1.77
LIMS2-215ENST00000484252 NOP58Q9Y2X3 529 aaKnown RBP26.09■■□□□ 1.77
LIMS2-215ENST00000484252 FANCAO15360 1455 aa26.09■■□□□ 1.77
LIMS2-215ENST00000484252 ANP32AP39687 249 aaKnown RBP26.08■■□□□ 1.77
LIMS2-215ENST00000484252 NPC1L1Q9UHC9 1359 aa26.07■■□□□ 1.76
LIMS2-215ENST00000484252 SLC24A1O60721 1099 aa26.07■■□□□ 1.76
LIMS2-215ENST00000484252 TCERG1O14776 1098 aaKnown RBP26.07■■□□□ 1.76
LIMS2-215ENST00000484252 ASXL1Q8IXJ9 1541 aa26.06■■□□□ 1.76
LIMS2-215ENST00000484252 AMER1Q5JTC6 1135 aaPredicted RBP26.06■■□□□ 1.76
LIMS2-215ENST00000484252 PPP2R1AP30153 589 aa26.05■■□□□ 1.76
LIMS2-215ENST00000484252 PIK3C2GO75747 1445 aa26.04■■□□□ 1.76
LIMS2-215ENST00000484252 MYOM2P54296 1465 aa26.04■■□□□ 1.76
LIMS2-215ENST00000484252 ADAMTS8Q9UP79 889 aa26.02■■□□□ 1.76
LIMS2-215ENST00000484252 WDR43Q15061 677 aaKnown RBP eCLIP26.02■■□□□ 1.76
LIMS2-215ENST00000484252 ADGRL1O94910 1474 aa26.01■■□□□ 1.75
LIMS2-215ENST00000484252 MYOM1P52179 1685 aa26.01■■□□□ 1.75
LIMS2-215ENST00000484252 IPO9Q96P70 1041 aaKnown RBP26.01■■□□□ 1.75
LIMS2-215ENST00000484252 KDM5AP29375 1690 aaKnown RBP26.01■■□□□ 1.75
LIMS2-215ENST00000484252 MROH1Q8NDA8 1641 aa26■■□□□ 1.75
LIMS2-215ENST00000484252 MS4A1P11836 297 aa25.99■■□□□ 1.75
LIMS2-215ENST00000484252 MAP3K4Q9Y6R4 1608 aa25.99■■□□□ 1.75
LIMS2-215ENST00000484252 KIF3BO15066 747 aa25.99■■□□□ 1.75
LIMS2-215ENST00000484252 EFCAB6Q5THR3 1501 aa25.95■■□□□ 1.75
LIMS2-215ENST00000484252 KIF1BO60333 1816 aa25.94■■□□□ 1.74
LIMS2-215ENST00000484252 ABCA6Q8N139 1617 aa25.93■■□□□ 1.74
LIMS2-215ENST00000484252 LMTK2Q8IWU2 1503 aa25.93■■□□□ 1.74
LIMS2-215ENST00000484252 ZNF521Q96K83 1311 aa25.93■■□□□ 1.74
LIMS2-215ENST00000484252 IFT172Q9UG01 1749 aa25.92■■□□□ 1.74
LIMS2-215ENST00000484252 PLEKHH1Q9ULM0 1364 aa25.91■■□□□ 1.74
LIMS2-215ENST00000484252 CRBNQ96SW2 442 aa25.91■■□□□ 1.74
LIMS2-215ENST00000484252 PLIN1O60240 522 aa25.9■■□□□ 1.74
LIMS2-215ENST00000484252 ASXL2Q76L83 1435 aa25.89■■□□□ 1.74
LIMS2-215ENST00000484252 PAK3O75914 559 aaPredicted RBP25.89■■□□□ 1.74
LIMS2-215ENST00000484252 ZBTB47Q9UFB7 747 aaPredicted RBP25.89■■□□□ 1.74
LIMS2-215ENST00000484252 ERVK-7P63135 1459 aa25.89■■□□□ 1.74
LIMS2-215ENST00000484252 NRXN1Q9ULB1 1477 aa25.89■■□□□ 1.74
LIMS2-215ENST00000484252 DUSP27Q5VZP5 1158 aa25.89■■□□□ 1.73
LIMS2-215ENST00000484252 GOLGA2Q08379 1002 aa25.88■■□□□ 1.73
LIMS2-215ENST00000484252 MYO3AQ8NEV4 1616 aa25.88■■□□□ 1.73
LIMS2-215ENST00000484252 SBNO2Q9Y2G9 1366 aa25.87■■□□□ 1.73
LIMS2-215ENST00000484252 UGGT1Q9NYU2 1555 aa25.87■■□□□ 1.73
LIMS2-215ENST00000484252 KIDINS220Q9ULH0 1771 aa25.87■■□□□ 1.73
LIMS2-215ENST00000484252 PDE4AP27815 886 aa25.87■■□□□ 1.73
LIMS2-215ENST00000484252 CFAP70Q5T0N1 1121 aa25.87■■□□□ 1.73
LIMS2-215ENST00000484252 PPRC1Q5VV67 1664 aaKnown RBP25.86■■□□□ 1.73
LIMS2-215ENST00000484252 BACH2Q9BYV9 841 aa25.86■■□□□ 1.73
LIMS2-215ENST00000484252 ZNF518AQ6AHZ1 1483 aa25.86■■□□□ 1.73
LIMS2-215ENST00000484252 ADGRF5Q8IZF2 1346 aa25.85■■□□□ 1.73
LIMS2-215ENST00000484252 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.84■■□□□ 1.73
LIMS2-215ENST00000484252 SETBP1Q9Y6X0 1596 aa25.84■■□□□ 1.73
LIMS2-215ENST00000484252 NGEFQ8N5V2 710 aa25.83■■□□□ 1.73
LIMS2-215ENST00000484252 ADGRB3O60242 1522 aa25.83■■□□□ 1.72
LIMS2-215ENST00000484252 MROH2AA6NES4 1674 aa25.82■■□□□ 1.72
LIMS2-215ENST00000484252 SLFN5Q08AF3 891 aa25.81■■□□□ 1.72
LIMS2-215ENST00000484252 TRMT2AQ8IZ69 625 aaKnown RBP25.79■■□□□ 1.72
LIMS2-215ENST00000484252 CFAP74Q9C0B2 1584 aa25.79■■□□□ 1.72
LIMS2-215ENST00000484252 KDM2BQ8NHM5 1336 aa25.76■■□□□ 1.71
LIMS2-215ENST00000484252 DEKP35659 375 aaKnown RBP25.76■■□□□ 1.71
LIMS2-215ENST00000484252 C20orf194Q5TEA3 1177 aa25.76■■□□□ 1.71
LIMS2-215ENST00000484252 CENPQQ7L2Z9 268 aaPredicted RBP25.76■■□□□ 1.71
LIMS2-215ENST00000484252 CARD14Q9BXL6 1004 aa25.75■■□□□ 1.71
LIMS2-215ENST00000484252 NOS1P29475 1434 aa25.74■■□□□ 1.71
LIMS2-215ENST00000484252 NKTRP30414 1462 aaKnown RBP25.74■■□□□ 1.71
LIMS2-215ENST00000484252 CENPJQ9HC77 1338 aaPredicted RBP25.74■■□□□ 1.71
LIMS2-215ENST00000484252 POLR3AO14802 1390 aaPredicted RBP25.73■■□□□ 1.71
LIMS2-215ENST00000484252 MLH3Q9UHC1 1453 aa25.72■■□□□ 1.71
LIMS2-215ENST00000484252 OSCARQ8IYS5 282 aa25.72■■□□□ 1.71
LIMS2-215ENST00000484252 E9PSI1 815 aa25.72■■□□□ 1.71
LIMS2-215ENST00000484252 POGZQ7Z3K3 1410 aa25.71■■□□□ 1.71
LIMS2-215ENST00000484252 CCDC146Q8IYE0 955 aa25.71■■□□□ 1.71
LIMS2-215ENST00000484252 PPLO60437 1756 aa25.71■■□□□ 1.71
LIMS2-215ENST00000484252 APAF1O14727 1248 aa25.7■■□□□ 1.71
LIMS2-215ENST00000484252 NPM2Q86SE8 214 aaKnown RBP25.7■■□□□ 1.71
LIMS2-215ENST00000484252 RPGRIP1LQ68CZ1 1315 aa25.7■■□□□ 1.71
LIMS2-215ENST00000484252 NBR1Q14596 966 aa25.7■■□□□ 1.7
LIMS2-215ENST00000484252 ZC3H13Q5T200 1668 aaKnown RBP25.69■■□□□ 1.7
LIMS2-215ENST00000484252 NPATQ14207 1427 aa25.69■■□□□ 1.7
LIMS2-215ENST00000484252 NPM1P06748 294 aaKnown RBP eCLIP25.69■■□□□ 1.7
LIMS2-215ENST00000484252 C14orf93Q9H972 538 aaKnown RBP25.68■■□□□ 1.7
LIMS2-215ENST00000484252 FRMPD1Q5SYB0 1578 aa25.68■■□□□ 1.7
LIMS2-215ENST00000484252 HECW2Q9P2P5 1572 aa25.67■■□□□ 1.7
LIMS2-215ENST00000484252 ADGRB1O14514 1584 aa25.66■■□□□ 1.7
LIMS2-215ENST00000484252 QRICH2Q9H0J4 1663 aa25.65■■□□□ 1.7
LIMS2-215ENST00000484252 CD109Q6YHK3 1445 aa25.65■■□□□ 1.7
LIMS2-215ENST00000484252 RTL5Q5HYW3 569 aaPredicted RBP25.65■■□□□ 1.7
LIMS2-215ENST00000484252 DDRGK1Q96HY6 314 aa25.65■■□□□ 1.7
LIMS2-215ENST00000484252 USP32Q8NFA0 1604 aa25.64■■□□□ 1.69
LIMS2-215ENST00000484252 CHGAP10645 457 aaKnown RBP25.64■■□□□ 1.69
LIMS2-215ENST00000484252 NSD3Q9BZ95 1437 aa25.63■■□□□ 1.69
LIMS2-215ENST00000484252 NINLQ9Y2I6 1382 aa25.62■■□□□ 1.69
LIMS2-215ENST00000484252 SPINK5Q9NQ38 1064 aaPredicted RBP25.62■■□□□ 1.69
LIMS2-215ENST00000484252 ABCC3O15438 1527 aa25.61■■□□□ 1.69
LIMS2-215ENST00000484252 PUS7Q96PZ0 661 aaKnown RBP25.61■■□□□ 1.69
LIMS2-215ENST00000484252 PRKCSHP14314 528 aaPredicted RBP25.6■■□□□ 1.69
LIMS2-215ENST00000484252 MORC1Q86VD1 984 aa25.6■■□□□ 1.69
LIMS2-215ENST00000484252 TRAK1Q9UPV9 953 aa25.6■■□□□ 1.69
LIMS2-215ENST00000484252 SHPRHQ149N8 1683 aa25.58■■□□□ 1.69
LIMS2-215ENST00000484252 GGT6Q6P531 493 aa25.57■■□□□ 1.68
LIMS2-215ENST00000484252 CAMSAP1Q5T5Y3 1602 aa25.56■■□□□ 1.68
LIMS2-215ENST00000484252 PDE3AQ14432 1141 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms