RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
UFD1-208ENST00000484101 MYOM2P54296 1465 aa13.39□□□□□ -0.27
UFD1-208ENST00000484101 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
UFD1-208ENST00000484101 CARD11Q9BXL7 1154 aa13.38□□□□□ -0.27
UFD1-208ENST00000484101 C3P01024 1663 aa13.37□□□□□ -0.27
UFD1-208ENST00000484101 PIP4K2BP78356 416 aa13.37□□□□□ -0.27
UFD1-208ENST00000484101 HIRIP3Q9BW71 556 aaPredicted RBP13.37□□□□□ -0.27
UFD1-208ENST00000484101 ABCC3O15438 1527 aa13.37□□□□□ -0.27
UFD1-208ENST00000484101 RGS17Q9UGC6 210 aaPredicted RBP13.36□□□□□ -0.27
UFD1-208ENST00000484101 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
UFD1-208ENST00000484101 KIF7Q2M1P5 1343 aa13.36□□□□□ -0.27
UFD1-208ENST00000484101 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
UFD1-208ENST00000484101 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
UFD1-208ENST00000484101 ARHGAP31Q2M1Z3 1444 aa13.35□□□□□ -0.27
UFD1-208ENST00000484101 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
UFD1-208ENST00000484101 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
UFD1-208ENST00000484101 AGLP35573 1532 aa13.34□□□□□ -0.27
UFD1-208ENST00000484101 KTN1Q86UP2 1357 aaKnown RBP13.32□□□□□ -0.28
UFD1-208ENST00000484101 PIK3C2BO00750 1634 aa13.32□□□□□ -0.28
UFD1-208ENST00000484101 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 TOM1O60784 492 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 KDM2AQ9Y2K7 1162 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 EIF3AQ14152 1382 aaKnown RBP13.31□□□□□ -0.28
UFD1-208ENST00000484101 MROH2AA6NES4 1674 aa13.31□□□□□ -0.28
UFD1-208ENST00000484101 NPATQ14207 1427 aa13.3□□□□□ -0.28
UFD1-208ENST00000484101 PPLO60437 1756 aa13.3□□□□□ -0.28
UFD1-208ENST00000484101 NRXN1Q9ULB1 1477 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 NOS1P29475 1434 aa13.29□□□□□ -0.28
UFD1-208ENST00000484101 RGL3Q3MIN7 710 aa13.28□□□□□ -0.28
UFD1-208ENST00000484101 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
UFD1-208ENST00000484101 RPGRIP1LQ68CZ1 1315 aa13.27□□□□□ -0.29
UFD1-208ENST00000484101 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
UFD1-208ENST00000484101 MYO3AQ8NEV4 1616 aa13.26□□□□□ -0.29
UFD1-208ENST00000484101 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
UFD1-208ENST00000484101 WASHC2CQ9Y4E1 1318 aa13.25□□□□□ -0.29
UFD1-208ENST00000484101 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
UFD1-208ENST00000484101 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
UFD1-208ENST00000484101 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
UFD1-208ENST00000484101 SYNMO15061 1565 aa13.24□□□□□ -0.29
UFD1-208ENST00000484101 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
UFD1-208ENST00000484101 POTEAQ6S8J7 498 aa13.22□□□□□ -0.29
UFD1-208ENST00000484101 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.29
UFD1-208ENST00000484101 TMF1P82094 1093 aa13.21□□□□□ -0.29
UFD1-208ENST00000484101 GGT6Q6P531 493 aa13.21□□□□□ -0.29
UFD1-208ENST00000484101 CPS1P31327 1500 aa13.21□□□□□ -0.29
UFD1-208ENST00000484101 SETD1AO15047 1707 aaKnown RBP13.2□□□□□ -0.3
UFD1-208ENST00000484101 SLC52A1Q9NWF4 448 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 ZFYVE9O95405 1425 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
UFD1-208ENST00000484101 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
UFD1-208ENST00000484101 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
UFD1-208ENST00000484101 ESF1Q9H501 851 aaKnown RBP13.19□□□□□ -0.3
UFD1-208ENST00000484101 NEXMIFQ5QGS0 1516 aa13.18□□□□□ -0.3
UFD1-208ENST00000484101 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
UFD1-208ENST00000484101 CFAP65Q6ZU64 1925 aaKnown RBP13.18□□□□□ -0.3
UFD1-208ENST00000484101 RALBP1Q15311 655 aa13.18□□□□□ -0.3
UFD1-208ENST00000484101 TESK2Q96S53 571 aa13.18□□□□□ -0.3
UFD1-208ENST00000484101 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
UFD1-208ENST00000484101 ERVK-7P63135 1459 aa13.16□□□□□ -0.3
UFD1-208ENST00000484101 CLTCQ00610 1675 aaKnown RBP13.16□□□□□ -0.3
UFD1-208ENST00000484101 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
UFD1-208ENST00000484101 ADGRB1O14514 1584 aa13.14□□□□□ -0.31
UFD1-208ENST00000484101 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
UFD1-208ENST00000484101 MYOM1P52179 1685 aa13.14□□□□□ -0.31
UFD1-208ENST00000484101 QRICH2Q9H0J4 1663 aa13.13□□□□□ -0.31
UFD1-208ENST00000484101 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
UFD1-208ENST00000484101 MRS2Q9HD23 443 aa13.13□□□□□ -0.31
UFD1-208ENST00000484101 MYBBP1AQ9BQG0 1328 aaKnown RBP13.13□□□□□ -0.31
UFD1-208ENST00000484101 INSRP06213 1382 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 MYO5BQ9ULV0 1848 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
UFD1-208ENST00000484101 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
UFD1-208ENST00000484101 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
UFD1-208ENST00000484101 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
UFD1-208ENST00000484101 ARHGEF28Q8N1W1 1705 aaKnown RBP13.1□□□□□ -0.31
UFD1-208ENST00000484101 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
UFD1-208ENST00000484101 C14orf93Q9H972 538 aaKnown RBP13.1□□□□□ -0.31
UFD1-208ENST00000484101 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
UFD1-208ENST00000484101 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
UFD1-208ENST00000484101 ZBED9Q6R2W3 1325 aa13.08□□□□□ -0.32
UFD1-208ENST00000484101 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
UFD1-208ENST00000484101 ASXL1Q8IXJ9 1541 aa13.07□□□□□ -0.32
UFD1-208ENST00000484101 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
UFD1-208ENST00000484101 SRCAPQ6ZRS2 3230 aa13.06□□□□□ -0.32
UFD1-208ENST00000484101 HNRNPUQ00839 825 aaKnown RBP eCLIP13.06□□□□□ -0.32
UFD1-208ENST00000484101 CFAP70Q5T0N1 1121 aa13.06□□□□□ -0.32
UFD1-208ENST00000484101 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
UFD1-208ENST00000484101 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
UFD1-208ENST00000484101 IDI1Q13907 227 aa13.04□□□□□ -0.32
UFD1-208ENST00000484101 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
UFD1-208ENST00000484101 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
UFD1-208ENST00000484101 NINLQ9Y2I6 1382 aa13.04□□□□□ -0.32
UFD1-208ENST00000484101 NEFLP07196 543 aa13.02□□□□□ -0.33
UFD1-208ENST00000484101 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
UFD1-208ENST00000484101 PANK3Q9H999 370 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms