RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 NISCHQ9Y2I1 1504 aa21.37■■□□□ 1.01
UFD1-208ENST00000484101 ABCC9O60706 1549 aa19.13■□□□□ 0.65
UFD1-208ENST00000484101 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
UFD1-208ENST00000484101 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
UFD1-208ENST00000484101 ZCCHC6Q5VYS8 1495 aaKnown RBP18.04■□□□□ 0.48
UFD1-208ENST00000484101 DNAJC5Q9H3Z4 198 aa17.92■□□□□ 0.46
UFD1-208ENST00000484101 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
UFD1-208ENST00000484101 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
UFD1-208ENST00000484101 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
UFD1-208ENST00000484101 MYO15BQ96JP2 1530 aa17.57■□□□□ 0.4
UFD1-208ENST00000484101 NACADO15069 1562 aa17.45■□□□□ 0.38
UFD1-208ENST00000484101 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
UFD1-208ENST00000484101 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
UFD1-208ENST00000484101 CECR2Q9BXF3 1484 aa17.32■□□□□ 0.36
UFD1-208ENST00000484101 SHROOM4Q9ULL8 1493 aa17.31■□□□□ 0.36
UFD1-208ENST00000484101 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
UFD1-208ENST00000484101 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
UFD1-208ENST00000484101 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
UFD1-208ENST00000484101 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
UFD1-208ENST00000484101 CUX2O14529 1486 aa16.86■□□□□ 0.29
UFD1-208ENST00000484101 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
UFD1-208ENST00000484101 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
UFD1-208ENST00000484101 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
UFD1-208ENST00000484101 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
UFD1-208ENST00000484101 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
UFD1-208ENST00000484101 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
UFD1-208ENST00000484101 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
UFD1-208ENST00000484101 WIZO95785 1651 aa16.34■□□□□ 0.21
UFD1-208ENST00000484101 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
UFD1-208ENST00000484101 PEG3Q9GZU2 1588 aa16.28■□□□□ 0.2
UFD1-208ENST00000484101 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
UFD1-208ENST00000484101 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.19
UFD1-208ENST00000484101 NESP48681 1621 aa16.19■□□□□ 0.18
UFD1-208ENST00000484101 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
UFD1-208ENST00000484101 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
UFD1-208ENST00000484101 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
UFD1-208ENST00000484101 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
UFD1-208ENST00000484101 BAZ1BQ9UIG0 1483 aaKnown RBP15.99■□□□□ 0.15
UFD1-208ENST00000484101 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
UFD1-208ENST00000484101 KIF21AQ7Z4S6 1674 aa15.94■□□□□ 0.14
UFD1-208ENST00000484101 AEBP2Q6ZN18 517 aaPredicted RBP15.93■□□□□ 0.14
UFD1-208ENST00000484101 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
UFD1-208ENST00000484101 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
UFD1-208ENST00000484101 RIMBP3CA6NJZ7 1639 aa15.85■□□□□ 0.13
UFD1-208ENST00000484101 RIMBP3BA6NNM3 1639 aa15.85■□□□□ 0.13
UFD1-208ENST00000484101 RIMBP3Q9UFD9 1639 aa15.85■□□□□ 0.13
UFD1-208ENST00000484101 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
UFD1-208ENST00000484101 WDR62O43379 1518 aa15.77■□□□□ 0.11
UFD1-208ENST00000484101 MRC2Q9UBG0 1479 aa15.76■□□□□ 0.11
UFD1-208ENST00000484101 PRDM2Q13029 1718 aa15.72■□□□□ 0.11
UFD1-208ENST00000484101 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
UFD1-208ENST00000484101 EEA1Q15075 1411 aa15.69■□□□□ 0.1
UFD1-208ENST00000484101 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
UFD1-208ENST00000484101 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
UFD1-208ENST00000484101 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
UFD1-208ENST00000484101 CYB5RLQ6IPT4 315 aa15.62■□□□□ 0.09
UFD1-208ENST00000484101 BIVM-ERCC5R4GMW8 1640 aa15.6■□□□□ 0.09
UFD1-208ENST00000484101 CFTRP13569 1480 aa15.59■□□□□ 0.09
UFD1-208ENST00000484101 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
UFD1-208ENST00000484101 TOP2BQ02880 1626 aa15.57■□□□□ 0.08
UFD1-208ENST00000484101 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
UFD1-208ENST00000484101 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
UFD1-208ENST00000484101 LOC105371045A0A1W2PR82 267 aa15.49■□□□□ 0.07
UFD1-208ENST00000484101 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
UFD1-208ENST00000484101 ILDR1Q86SU0 546 aaPredicted RBP15.47■□□□□ 0.07
UFD1-208ENST00000484101 KIF21BO75037 1637 aa15.45■□□□□ 0.06
UFD1-208ENST00000484101 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
UFD1-208ENST00000484101 FANCD2Q9BXW9 1451 aa15.41■□□□□ 0.06
UFD1-208ENST00000484101 SOGA1O94964 1423 aa15.41■□□□□ 0.06
UFD1-208ENST00000484101 GOLGA3Q08378 1498 aa15.4■□□□□ 0.06
UFD1-208ENST00000484101 CUX1P39880 1505 aa15.39■□□□□ 0.05
UFD1-208ENST00000484101 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
UFD1-208ENST00000484101 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
UFD1-208ENST00000484101 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
UFD1-208ENST00000484101 ZNF608Q9ULD9 1512 aaPredicted RBP15.33■□□□□ 0.05
UFD1-208ENST00000484101 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
UFD1-208ENST00000484101 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
UFD1-208ENST00000484101 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
UFD1-208ENST00000484101 KIF27Q86VH2 1401 aa15.27■□□□□ 0.04
UFD1-208ENST00000484101 CHD1O14646 1710 aa15.25■□□□□ 0.03
UFD1-208ENST00000484101 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
UFD1-208ENST00000484101 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
UFD1-208ENST00000484101 PRXQ9BXM0 1461 aa15.2■□□□□ 0.02
UFD1-208ENST00000484101 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
UFD1-208ENST00000484101 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
UFD1-208ENST00000484101 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
UFD1-208ENST00000484101 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
UFD1-208ENST00000484101 UBTFP17480 764 aaKnown RBP15.14■□□□□ 0.01
UFD1-208ENST00000484101 RAPGEF2Q9Y4G8 1499 aa15.14■□□□□ 0.01
UFD1-208ENST00000484101 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
UFD1-208ENST00000484101 WDR97A6NE52 1622 aa15.12■□□□□ 0.01
UFD1-208ENST00000484101 FBLN2P98095 1184 aa15.11■□□□□ 0.01
UFD1-208ENST00000484101 CUL7Q14999 1698 aa15.1■□□□□ 0.01
UFD1-208ENST00000484101 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
UFD1-208ENST00000484101 CLIP1P30622 1438 aa15.09■□□□□ 0.01
UFD1-208ENST00000484101 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
UFD1-208ENST00000484101 PCGF6Q9BYE7 350 aa15.08■□□□□ 0
UFD1-208ENST00000484101 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 05e-8■■■■□ 24.6
UFD1-208ENST00000484101 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
UFD1-208ENST00000484101 VPS8Q8N3P4 1428 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms