RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 RPRD2Q5VT52 1461 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-206ENST00000482632 MYO5BQ9ULV0 1848 aa14.9□□□□□ -0.02
SPTLC1-206ENST00000482632 SPHKAPQ2M3C7 1700 aa14.9□□□□□ -0.02
SPTLC1-206ENST00000482632 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1-206ENST00000482632 CHGAP10645 457 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-206ENST00000482632 SETD5Q9C0A6 1442 aa14.89□□□□□ -0.03
SPTLC1-206ENST00000482632 NOS1P29475 1434 aa14.88□□□□□ -0.03
SPTLC1-206ENST00000482632 PLA2R1Q13018 1463 aa14.88□□□□□ -0.03
SPTLC1-206ENST00000482632 PKD2Q13563 968 aa14.86□□□□□ -0.03
SPTLC1-206ENST00000482632 IDI1Q13907 227 aa14.86□□□□□ -0.03
SPTLC1-206ENST00000482632 ADGRB3O60242 1522 aa14.86□□□□□ -0.03
SPTLC1-206ENST00000482632 ANKLE2Q86XL3 938 aa14.85□□□□□ -0.03
SPTLC1-206ENST00000482632 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
SPTLC1-206ENST00000482632 SLC52A1Q9NWF4 448 aa14.84□□□□□ -0.03
SPTLC1-206ENST00000482632 KDM5AP29375 1690 aaKnown RBP14.83□□□□□ -0.04
SPTLC1-206ENST00000482632 PTPRTO14522 1441 aa14.83□□□□□ -0.04
SPTLC1-206ENST00000482632 ABCB7O75027 752 aa14.82□□□□□ -0.04
SPTLC1-206ENST00000482632 EID1Q9Y6B2 187 aa14.82□□□□□ -0.04
SPTLC1-206ENST00000482632 KIF1BO60333 1816 aa14.82□□□□□ -0.04
SPTLC1-206ENST00000482632 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
SPTLC1-206ENST00000482632 IQGAP1P46940 1657 aa14.81□□□□□ -0.04
SPTLC1-206ENST00000482632 CLTCL1P53675 1640 aa14.81□□□□□ -0.04
SPTLC1-206ENST00000482632 TXNDC2Q86VQ3 553 aa14.8□□□□□ -0.04
SPTLC1-206ENST00000482632 BCANQ96GW7 911 aa14.8□□□□□ -0.04
SPTLC1-206ENST00000482632 NPHP4O75161 1426 aaPredicted RBP14.8□□□□□ -0.04
SPTLC1-206ENST00000482632 SCAF11Q99590 1463 aaKnown RBP14.8□□□□□ -0.04
SPTLC1-206ENST00000482632 TMEM131LA2VDJ0 1609 aa14.8□□□□□ -0.04
SPTLC1-206ENST00000482632 SLIT1O75093 1534 aa14.78□□□□□ -0.04
SPTLC1-206ENST00000482632 TRPM2O94759 1503 aa14.78□□□□□ -0.04
SPTLC1-206ENST00000482632 TMEM2Q9UHN6 1383 aa14.78□□□□□ -0.04
SPTLC1-206ENST00000482632 PPP1R15AO75807 674 aaPredicted RBP14.78□□□□□ -0.04
SPTLC1-206ENST00000482632 ZNF326Q5BKZ1 582 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-206ENST00000482632 MPHOSPH9Q99550 1183 aa14.78□□□□□ -0.04
SPTLC1-206ENST00000482632 ARHGAP23Q9P227 1491 aa14.76□□□□□ -0.05
SPTLC1-206ENST00000482632 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-206ENST00000482632 LTKP29376 864 aa14.76□□□□□ -0.05
SPTLC1-206ENST00000482632 NUTM2DQ5VT03 806 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-206ENST00000482632 RIMS2Q9UQ26 1411 aa14.75□□□□□ -0.05
SPTLC1-206ENST00000482632 ZNF335Q9H4Z2 1342 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1-206ENST00000482632 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
SPTLC1-206ENST00000482632 MED14O60244 1454 aa14.73□□□□□ -0.05
SPTLC1-206ENST00000482632 TRIM26Q12899 539 aaPredicted RBP14.71□□□□□ -0.05
SPTLC1-206ENST00000482632 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.71□□□□□ -0.05
SPTLC1-206ENST00000482632 CCDC144AA2RUR9 1427 aa14.71□□□□□ -0.05
SPTLC1-206ENST00000482632 ZFYVE9O95405 1425 aa14.7□□□□□ -0.06
SPTLC1-206ENST00000482632 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
SPTLC1-206ENST00000482632 SLC26A8Q96RN1 970 aa14.69□□□□□ -0.06
SPTLC1-206ENST00000482632 RGL3Q3MIN7 710 aa14.67□□□□□ -0.06
SPTLC1-206ENST00000482632 STRCP1A6NGW2 1772 aa14.67□□□□□ -0.06
SPTLC1-206ENST00000482632 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
SPTLC1-206ENST00000482632 HRCP23327 699 aa14.66□□□□□ -0.06
SPTLC1-206ENST00000482632 NEXMIFQ5QGS0 1516 aa14.66□□□□□ -0.06
SPTLC1-206ENST00000482632 PPLO60437 1756 aa14.65□□□□□ -0.06
SPTLC1-206ENST00000482632 CPS1P31327 1500 aa14.64□□□□□ -0.07
SPTLC1-206ENST00000482632 UBAP1LF5GYI3 381 aa14.62□□□□□ -0.07
SPTLC1-206ENST00000482632 DIP2AQ14689 1571 aa14.61□□□□□ -0.07
SPTLC1-206ENST00000482632 CHD2O14647 1828 aaKnown RBP14.6□□□□□ -0.07
SPTLC1-206ENST00000482632 IFT172Q9UG01 1749 aa14.6□□□□□ -0.07
SPTLC1-206ENST00000482632 NRXN3Q9Y4C0 1643 aa14.59□□□□□ -0.07
SPTLC1-206ENST00000482632 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
SPTLC1-206ENST00000482632 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
SPTLC1-206ENST00000482632 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
SPTLC1-206ENST00000482632 ANKRD30BQ9BXX2 1392 aa14.59□□□□□ -0.07
SPTLC1-206ENST00000482632 FKBP8Q14318 412 aa14.58□□□□□ -0.08
SPTLC1-206ENST00000482632 POTEHQ6S545 545 aa14.58□□□□□ -0.08
SPTLC1-206ENST00000482632 SETBP1Q9Y6X0 1596 aa14.58□□□□□ -0.08
SPTLC1-206ENST00000482632 ADAMTS13Q76LX8 1427 aa14.58□□□□□ -0.08
SPTLC1-206ENST00000482632 KCNA6P17658 529 aa14.57□□□□□ -0.08
SPTLC1-206ENST00000482632 PROSER2Q86WR7 435 aaPredicted RBP14.57□□□□□ -0.08
SPTLC1-206ENST00000482632 TBX22Q9Y458 520 aa14.57□□□□□ -0.08
SPTLC1-206ENST00000482632 XIRP1Q702N8 1843 aaKnown RBP14.57□□□□□ -0.08
SPTLC1-206ENST00000482632 SPATA31E1Q6ZUB1 1445 aa14.57□□□□□ -0.08
SPTLC1-206ENST00000482632 LRRC7Q96NW7 1537 aa14.56□□□□□ -0.08
SPTLC1-206ENST00000482632 NWD1Q149M9 1564 aa14.56□□□□□ -0.08
SPTLC1-206ENST00000482632 RBM33Q96EV2 1170 aaKnown RBP14.56□□□□□ -0.08
SPTLC1-206ENST00000482632 POLA2Q14181 598 aa14.55□□□□□ -0.08
SPTLC1-206ENST00000482632 PCGF6Q9BYE7 350 aa14.55□□□□□ -0.08
SPTLC1-206ENST00000482632 C14orf37Q86TY3 774 aa14.54□□□□□ -0.08
SPTLC1-206ENST00000482632 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
SPTLC1-206ENST00000482632 MED1Q15648 1581 aaPredicted RBP14.54□□□□□ -0.08
SPTLC1-206ENST00000482632 ALKQ9UM73 1620 aa14.53□□□□□ -0.08
SPTLC1-206ENST00000482632 NKTRP30414 1462 aaKnown RBP14.53□□□□□ -0.08
SPTLC1-206ENST00000482632 ADGRF5Q8IZF2 1346 aa14.53□□□□□ -0.08
SPTLC1-206ENST00000482632 HSPA1LP34931 641 aa14.53□□□□□ -0.08
SPTLC1-206ENST00000482632 SETD1AO15047 1707 aaKnown RBP14.52□□□□□ -0.08
SPTLC1-206ENST00000482632 PIP4K2BP78356 416 aa14.52□□□□□ -0.09
SPTLC1-206ENST00000482632 AMOTL2Q9Y2J4 779 aa14.52□□□□□ -0.09
SPTLC1-206ENST00000482632 METP08581 1390 aa14.51□□□□□ -0.09
SPTLC1-206ENST00000482632 TMEM94Q12767 1356 aa14.51□□□□□ -0.09
SPTLC1-206ENST00000482632 PTPRUQ92729 1446 aa14.5□□□□□ -0.09
SPTLC1-206ENST00000482632 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-206ENST00000482632 PIK3R4Q99570 1358 aa14.5□□□□□ -0.09
SPTLC1-206ENST00000482632 XRN1Q8IZH2 1706 aaKnown RBP14.5□□□□□ -0.09
SPTLC1-206ENST00000482632 TOM1O60784 492 aa14.5□□□□□ -0.09
SPTLC1-206ENST00000482632 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
SPTLC1-206ENST00000482632 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
SPTLC1-206ENST00000482632 MYOM2P54296 1465 aa14.48□□□□□ -0.09
SPTLC1-206ENST00000482632 MSH6P52701 1360 aa14.47□□□□□ -0.09
SPTLC1-206ENST00000482632 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
SPTLC1-206ENST00000482632 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms