RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
CCNC-204ENST00000482541 LTKP29376 864 aa11.83□□□□□ -0.52
CCNC-204ENST00000482541 KDM5AP29375 1690 aaKnown RBP11.83□□□□□ -0.52
CCNC-204ENST00000482541 EFCAB6Q5THR3 1501 aa11.83□□□□□ -0.52
CCNC-204ENST00000482541 SCAF11Q99590 1463 aaKnown RBP11.83□□□□□ -0.52
CCNC-204ENST00000482541 UBAP1LF5GYI3 381 aa11.83□□□□□ -0.52
CCNC-204ENST00000482541 TMEM2Q9UHN6 1383 aa11.82□□□□□ -0.52
CCNC-204ENST00000482541 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
CCNC-204ENST00000482541 ITGAEP38570 1179 aa11.81□□□□□ -0.52
CCNC-204ENST00000482541 TOM1O60784 492 aa11.8□□□□□ -0.52
CCNC-204ENST00000482541 UNC13BO14795 1591 aa11.8□□□□□ -0.52
CCNC-204ENST00000482541 SYNMO15061 1565 aa11.8□□□□□ -0.52
CCNC-204ENST00000482541 TET3O43151 1660 aa11.8□□□□□ -0.52
CCNC-204ENST00000482541 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
CCNC-204ENST00000482541 RRBP1Q9P2E9 1410 aaKnown RBP11.78□□□□□ -0.52
CCNC-204ENST00000482541 GCC2Q8IWJ2 1684 aa11.78□□□□□ -0.52
CCNC-204ENST00000482541 NUP155O75694 1391 aa11.77□□□□□ -0.53
CCNC-204ENST00000482541 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
CCNC-204ENST00000482541 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
CCNC-204ENST00000482541 IQGAP3Q86VI3 1631 aa11.76□□□□□ -0.53
CCNC-204ENST00000482541 ADGRB3O60242 1522 aa11.75□□□□□ -0.53
CCNC-204ENST00000482541 CAPN15O75808 1086 aa11.75□□□□□ -0.53
CCNC-204ENST00000482541 STRCP1A6NGW2 1772 aa11.75□□□□□ -0.53
CCNC-204ENST00000482541 LRRC7Q96NW7 1537 aa11.75□□□□□ -0.53
CCNC-204ENST00000482541 E9PCH4 1651 aa11.74□□□□□ -0.53
CCNC-204ENST00000482541 PIP4K2BP78356 416 aa11.73□□□□□ -0.53
CCNC-204ENST00000482541 TMEM131LA2VDJ0 1609 aa11.73□□□□□ -0.53
CCNC-204ENST00000482541 KCNA6P17658 529 aa11.72□□□□□ -0.53
CCNC-204ENST00000482541 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
CCNC-204ENST00000482541 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.72□□□□□ -0.53
CCNC-204ENST00000482541 SLC26A8Q96RN1 970 aa11.72□□□□□ -0.53
CCNC-204ENST00000482541 BCANQ96GW7 911 aa11.72□□□□□ -0.53
CCNC-204ENST00000482541 ZFYVE9O95405 1425 aa11.71□□□□□ -0.53
CCNC-204ENST00000482541 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.54
CCNC-204ENST00000482541 POLA2Q14181 598 aa11.71□□□□□ -0.54
CCNC-204ENST00000482541 RTN4Q9NQC3 1192 aaKnown RBP11.71□□□□□ -0.54
CCNC-204ENST00000482541 MYO5BQ9ULV0 1848 aa11.7□□□□□ -0.54
CCNC-204ENST00000482541 PPP1R15AO75807 674 aaPredicted RBP11.7□□□□□ -0.54
CCNC-204ENST00000482541 DISP3Q9P2K9 1392 aa11.7□□□□□ -0.54
CCNC-204ENST00000482541 PLEKHG1Q9ULL1 1385 aa11.7□□□□□ -0.54
CCNC-204ENST00000482541 NAIPQ13075 1403 aa11.7□□□□□ -0.54
CCNC-204ENST00000482541 RIMS2Q9UQ26 1411 aa11.7□□□□□ -0.54
CCNC-204ENST00000482541 HSPA1LP34931 641 aa11.69□□□□□ -0.54
CCNC-204ENST00000482541 AMER1Q5JTC6 1135 aaPredicted RBP11.69□□□□□ -0.54
CCNC-204ENST00000482541 TBX22Q9Y458 520 aa11.69□□□□□ -0.54
CCNC-204ENST00000482541 ALKQ9UM73 1620 aa11.69□□□□□ -0.54
CCNC-204ENST00000482541 PROSER2Q86WR7 435 aaPredicted RBP11.68□□□□□ -0.54
CCNC-204ENST00000482541 HFM1A2PYH4 1435 aa11.67□□□□□ -0.54
CCNC-204ENST00000482541 XIRP1Q702N8 1843 aaKnown RBP11.67□□□□□ -0.54
CCNC-204ENST00000482541 TMEM94Q12767 1356 aa11.66□□□□□ -0.54
CCNC-204ENST00000482541 NKTRP30414 1462 aaKnown RBP11.65□□□□□ -0.54
CCNC-204ENST00000482541 SPHKAPQ2M3C7 1700 aa11.65□□□□□ -0.54
CCNC-204ENST00000482541 TRIM52Q96A61 297 aa11.65□□□□□ -0.54
CCNC-204ENST00000482541 CHD2O14647 1828 aaKnown RBP11.64□□□□□ -0.55
CCNC-204ENST00000482541 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
CCNC-204ENST00000482541 NUTM2DQ5VT03 806 aaPredicted RBP11.64□□□□□ -0.55
CCNC-204ENST00000482541 PIK3R4Q99570 1358 aa11.64□□□□□ -0.55
CCNC-204ENST00000482541 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
CCNC-204ENST00000482541 FAM135BQ49AJ0 1406 aa11.63□□□□□ -0.55
CCNC-204ENST00000482541 ADAMTS13Q76LX8 1427 aa11.63□□□□□ -0.55
CCNC-204ENST00000482541 NCOA3Q9Y6Q9 1424 aa11.63□□□□□ -0.55
CCNC-204ENST00000482541 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
CCNC-204ENST00000482541 ZNF326Q5BKZ1 582 aaKnown RBP11.62□□□□□ -0.55
CCNC-204ENST00000482541 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
CCNC-204ENST00000482541 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
CCNC-204ENST00000482541 MSH6P52701 1360 aa11.61□□□□□ -0.55
CCNC-204ENST00000482541 ACIN1Q9UKV3 1341 aaKnown RBP11.61□□□□□ -0.55
CCNC-204ENST00000482541 TRPM2O94759 1503 aa11.61□□□□□ -0.55
CCNC-204ENST00000482541 SLAIN2Q9P270 581 aa11.59□□□□□ -0.55
CCNC-204ENST00000482541 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
CCNC-204ENST00000482541 KIF1BO60333 1816 aa11.59□□□□□ -0.55
CCNC-204ENST00000482541 VGFO15240 615 aaPredicted RBP11.58□□□□□ -0.56
CCNC-204ENST00000482541 ABCB7O75027 752 aa11.58□□□□□ -0.56
CCNC-204ENST00000482541 CLTCL1P53675 1640 aa11.58□□□□□ -0.56
CCNC-204ENST00000482541 C19orf44Q9H6X5 657 aa11.57□□□□□ -0.56
CCNC-204ENST00000482541 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
CCNC-204ENST00000482541 RPGRIP1LQ68CZ1 1315 aa11.57□□□□□ -0.56
CCNC-204ENST00000482541 MED1Q15648 1581 aaPredicted RBP11.56□□□□□ -0.56
CCNC-204ENST00000482541 C14orf37Q86TY3 774 aa11.56□□□□□ -0.56
CCNC-204ENST00000482541 CADPS2Q86UW7 1296 aa11.56□□□□□ -0.56
CCNC-204ENST00000482541 NEXMIFQ5QGS0 1516 aa11.56□□□□□ -0.56
CCNC-204ENST00000482541 PTPRUQ92729 1446 aa11.55□□□□□ -0.56
CCNC-204ENST00000482541 SOCS7O14512 581 aa11.55□□□□□ -0.56
CCNC-204ENST00000482541 MPHOSPH9Q99550 1183 aa11.55□□□□□ -0.56
CCNC-204ENST00000482541 NRXN3Q9Y4C0 1643 aa11.55□□□□□ -0.56
CCNC-204ENST00000482541 ATF3P18847 181 aa11.55□□□□□ -0.56
CCNC-204ENST00000482541 ROBO1Q9Y6N7 1651 aa11.55□□□□□ -0.56
CCNC-204ENST00000482541 METP08581 1390 aa11.53□□□□□ -0.56
CCNC-204ENST00000482541 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.52□□□□□ -0.56
CCNC-204ENST00000482541 SETD5Q9C0A6 1442 aa11.52□□□□□ -0.57
CCNC-204ENST00000482541 XRN1Q8IZH2 1706 aaKnown RBP11.52□□□□□ -0.57
CCNC-204ENST00000482541 PROM2Q8N271 834 aa11.52□□□□□ -0.57
CCNC-204ENST00000482541 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
CCNC-204ENST00000482541 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
CCNC-204ENST00000482541 DCCP43146 1447 aa11.51□□□□□ -0.57
CCNC-204ENST00000482541 PPLO60437 1756 aa11.48□□□□□ -0.57
CCNC-204ENST00000482541 RGL3Q3MIN7 710 aa11.48□□□□□ -0.57
CCNC-204ENST00000482541 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
CCNC-204ENST00000482541 PHLPP1O60346 1717 aa11.48□□□□□ -0.57
CCNC-204ENST00000482541 ANKRD30BQ9BXX2 1392 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms