RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PPP1R15AO75807 674 aaPredicted RBP30.21■■■□□ 2.43
VARS-224ENST00000479051 CCDC144AA2RUR9 1427 aa30.2■■■□□ 2.42
VARS-224ENST00000479051 KIF1BO60333 1816 aa30.19■■■□□ 2.42
VARS-224ENST00000479051 ZNF326Q5BKZ1 582 aaKnown RBP30.19■■■□□ 2.42
VARS-224ENST00000479051 ZFYVE9O95405 1425 aa30.19■■■□□ 2.42
VARS-224ENST00000479051 BCANQ96GW7 911 aa30.15■■■□□ 2.42
VARS-224ENST00000479051 ZNF335Q9H4Z2 1342 aaPredicted RBP30.13■■■□□ 2.41
VARS-224ENST00000479051 PLEKHG1Q9ULL1 1385 aa30.11■■■□□ 2.41
VARS-224ENST00000479051 CERKQ8TCT0 537 aa30.08■■■□□ 2.41
VARS-224ENST00000479051 LTBP4Q8N2S1 1624 aa30.07■■■□□ 2.4
VARS-224ENST00000479051 NUTM2DQ5VT03 806 aaPredicted RBP30.07■■■□□ 2.4
VARS-224ENST00000479051 RPGRIP1LQ68CZ1 1315 aa30.06■■■□□ 2.4
VARS-224ENST00000479051 SLC26A8Q96RN1 970 aa30.03■■■□□ 2.4
VARS-224ENST00000479051 ANKRD30BQ9BXX2 1392 aa30.03■■■□□ 2.4
VARS-224ENST00000479051 CPS1P31327 1500 aa30.02■■■□□ 2.4
VARS-224ENST00000479051 NEXMIFQ5QGS0 1516 aa30.02■■■□□ 2.4
VARS-224ENST00000479051 SENP3Q9H4L4 574 aaPredicted RBP30■■■□□ 2.39
VARS-224ENST00000479051 VGFO15240 615 aaPredicted RBP29.99■■■□□ 2.39
VARS-224ENST00000479051 SPATA31E1Q6ZUB1 1445 aa29.98■■■□□ 2.39
VARS-224ENST00000479051 RGL3Q3MIN7 710 aa29.98■■■□□ 2.39
VARS-224ENST00000479051 TBX22Q9Y458 520 aa29.97■■■□□ 2.39
VARS-224ENST00000479051 DIP2AQ14689 1571 aa29.97■■■□□ 2.39
VARS-224ENST00000479051 IQSEC2Q5JU85 1478 aa29.96■■■□□ 2.39
VARS-224ENST00000479051 ADAMTS13Q76LX8 1427 aa29.93■■■□□ 2.38
VARS-224ENST00000479051 SETBP1Q9Y6X0 1596 aa29.93■■■□□ 2.38
VARS-224ENST00000479051 PPLO60437 1756 aa29.92■■■□□ 2.38
VARS-224ENST00000479051 KCNA6P17658 529 aa29.91■■■□□ 2.38
VARS-224ENST00000479051 PIK3R4Q99570 1358 aa29.89■■■□□ 2.37
VARS-224ENST00000479051 STRCP1A6NGW2 1772 aa29.88■■■□□ 2.37
VARS-224ENST00000479051 FBXO41Q8TF61 875 aa29.87■■■□□ 2.37
VARS-224ENST00000479051 NWD1Q149M9 1564 aa29.86■■■□□ 2.37
VARS-224ENST00000479051 NRXN3Q9Y4C0 1643 aa29.85■■■□□ 2.37
VARS-224ENST00000479051 NKTRP30414 1462 aaKnown RBP29.84■■■□□ 2.37
VARS-224ENST00000479051 IFT172Q9UG01 1749 aa29.84■■■□□ 2.37
VARS-224ENST00000479051 LRRC7Q96NW7 1537 aa29.83■■■□□ 2.37
VARS-224ENST00000479051 CHD2O14647 1828 aaKnown RBP29.82■■■□□ 2.36
VARS-224ENST00000479051 DHX57Q6P158 1386 aaKnown RBP29.8■■■□□ 2.36
VARS-224ENST00000479051 ADGRF5Q8IZF2 1346 aa29.79■■■□□ 2.36
VARS-224ENST00000479051 PROSER2Q86WR7 435 aaPredicted RBP29.79■■■□□ 2.36
VARS-224ENST00000479051 PCGF6Q9BYE7 350 aa29.79■■■□□ 2.36
VARS-224ENST00000479051 MYOM2P54296 1465 aa29.77■■■□□ 2.36
VARS-224ENST00000479051 ALKQ9UM73 1620 aa29.76■■■□□ 2.35
VARS-224ENST00000479051 METP08581 1390 aa29.76■■■□□ 2.35
VARS-224ENST00000479051 STAC3Q96MF2 364 aa29.75■■■□□ 2.35
VARS-224ENST00000479051 AMOTL2Q9Y2J4 779 aa29.75■■■□□ 2.35
VARS-224ENST00000479051 ILDR1Q86SU0 546 aaPredicted RBP29.74■■■□□ 2.35
VARS-224ENST00000479051 PIK3C2GO75747 1445 aa29.73■■■□□ 2.35
VARS-224ENST00000479051 UBAP1LF5GYI3 381 aa29.73■■■□□ 2.35
VARS-224ENST00000479051 TMEM94Q12767 1356 aa29.73■■■□□ 2.35
VARS-224ENST00000479051 DCAF11Q8TEB1 546 aa29.72■■■□□ 2.35
VARS-224ENST00000479051 PTPRUQ92729 1446 aa29.71■■■□□ 2.35
VARS-224ENST00000479051 TOM1O60784 492 aa29.71■■■□□ 2.35
VARS-224ENST00000479051 NRXN1Q9ULB1 1477 aa29.69■■■□□ 2.34
VARS-224ENST00000479051 SETD1AO15047 1707 aaKnown RBP29.69■■■□□ 2.34
VARS-224ENST00000479051 KDM2AQ9Y2K7 1162 aa29.69■■■□□ 2.34
VARS-224ENST00000479051 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
VARS-224ENST00000479051 NCOA3Q9Y6Q9 1424 aa29.67■■■□□ 2.34
VARS-224ENST00000479051 XIRP1Q702N8 1843 aaKnown RBP29.66■■■□□ 2.34
VARS-224ENST00000479051 C14orf37Q86TY3 774 aa29.65■■■□□ 2.34
VARS-224ENST00000479051 LAMC1P11047 1609 aa29.64■■■□□ 2.34
VARS-224ENST00000479051 RBM33Q96EV2 1170 aaKnown RBP29.64■■■□□ 2.34
VARS-224ENST00000479051 MSH6P52701 1360 aa29.64■■■□□ 2.33
VARS-224ENST00000479051 NEUROD1Q13562 356 aa29.63■■■□□ 2.33
VARS-224ENST00000479051 SIN3AQ96ST3 1273 aa29.63■■■□□ 2.33
VARS-224ENST00000479051 C14orf93Q9H972 538 aaKnown RBP29.63■■■□□ 2.33
VARS-224ENST00000479051 PTCH1Q13635 1447 aa29.59■■■□□ 2.33
VARS-224ENST00000479051 CFAP70Q5T0N1 1121 aa29.58■■■□□ 2.33
VARS-224ENST00000479051 PRAG1Q86YV5 1406 aa29.58■■■□□ 2.33
VARS-224ENST00000479051 SCAF1Q9H7N4 1312 aaKnown RBP29.58■■■□□ 2.33
VARS-224ENST00000479051 LRPPRCP42704 1394 aaKnown RBP29.56■■■□□ 2.32
VARS-224ENST00000479051 PIP4K2BP78356 416 aa29.56■■■□□ 2.32
VARS-224ENST00000479051 TMEM132EQ6IEE7 984 aa29.55■■■□□ 2.32
VARS-224ENST00000479051 C19orf44Q9H6X5 657 aa29.54■■■□□ 2.32
VARS-224ENST00000479051 STK26Q9P289 416 aa29.54■■■□□ 2.32
VARS-224ENST00000479051 ASXL1Q8IXJ9 1541 aa29.54■■■□□ 2.32
VARS-224ENST00000479051 YTHDC2Q9H6S0 1430 aaKnown RBP29.53■■■□□ 2.32
VARS-224ENST00000479051 L3MBTL2Q969R5 705 aa29.52■■■□□ 2.32
VARS-224ENST00000479051 ABCC11Q96J66 1382 aa29.52■■■□□ 2.32
VARS-224ENST00000479051 ROBO2Q9HCK4 1378 aa29.52■■■□□ 2.32
VARS-224ENST00000479051 ATF3P18847 181 aa29.51■■■□□ 2.31
VARS-224ENST00000479051 TECPR2O15040 1411 aa29.51■■■□□ 2.31
VARS-224ENST00000479051 CADPS2Q86UW7 1296 aa29.5■■■□□ 2.31
VARS-224ENST00000479051 KNDC1Q76NI1 1749 aa29.49■■■□□ 2.31
VARS-224ENST00000479051 ADGRL3Q9HAR2 1447 aa29.48■■■□□ 2.31
VARS-224ENST00000479051 DCCP43146 1447 aa29.47■■■□□ 2.31
VARS-224ENST00000479051 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.47■■■□□ 2.31
VARS-224ENST00000479051 TONSLQ96HA7 1378 aa29.47■■■□□ 2.31
VARS-224ENST00000479051 ADGRB1O14514 1584 aa29.44■■■□□ 2.3
VARS-224ENST00000479051 SIRT1Q96EB6 747 aa29.44■■■□□ 2.3
VARS-224ENST00000479051 CLSPNQ9HAW4 1339 aa29.44■■■□□ 2.3
VARS-224ENST00000479051 KIAA1210Q9ULL0 1709 aa29.43■■■□□ 2.3
VARS-224ENST00000479051 SLAIN2Q9P270 581 aa29.42■■■□□ 2.3
VARS-224ENST00000479051 FAM135BQ49AJ0 1406 aa29.42■■■□□ 2.3
VARS-224ENST00000479051 NALCNQ8IZF0 1738 aa29.41■■■□□ 2.3
VARS-224ENST00000479051 WAPLQ7Z5K2 1190 aa29.39■■■□□ 2.3
VARS-224ENST00000479051 DLC1Q96QB1 1528 aa29.39■■■□□ 2.3
VARS-224ENST00000479051 TRAK1Q9UPV9 953 aa29.37■■■□□ 2.29
VARS-224ENST00000479051 POGKQ9P215 609 aa29.36■■■□□ 2.29
VARS-224ENST00000479051 CCER1Q8TC90 406 aaPredicted RBP29.34■■■□□ 2.29
VARS-224ENST00000479051 PRAM1Q96QH2 718 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms