RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
RPSA-207ENST00000478027 TXNDC2Q86VQ3 553 aa17.18■□□□□ 0.34
RPSA-207ENST00000478027 ZFYVE9O95405 1425 aa17.18■□□□□ 0.34
RPSA-207ENST00000478027 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
RPSA-207ENST00000478027 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
RPSA-207ENST00000478027 RIMS2Q9UQ26 1411 aa17.14■□□□□ 0.33
RPSA-207ENST00000478027 HRCP23327 699 aa17.14■□□□□ 0.33
RPSA-207ENST00000478027 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
RPSA-207ENST00000478027 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
RPSA-207ENST00000478027 IQSEC2Q5JU85 1478 aa17.12■□□□□ 0.33
RPSA-207ENST00000478027 HDGFP51858 240 aaKnown RBP17.12■□□□□ 0.33
RPSA-207ENST00000478027 CPS1P31327 1500 aa17.11■□□□□ 0.33
RPSA-207ENST00000478027 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPSA-207ENST00000478027 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
RPSA-207ENST00000478027 NEXMIFQ5QGS0 1516 aa17.08■□□□□ 0.32
RPSA-207ENST00000478027 CCDC144AA2RUR9 1427 aa17.07■□□□□ 0.32
RPSA-207ENST00000478027 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
RPSA-207ENST00000478027 PPLO60437 1756 aa17.07■□□□□ 0.32
RPSA-207ENST00000478027 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
RPSA-207ENST00000478027 CHD2O14647 1828 aaKnown RBP17.05■□□□□ 0.32
RPSA-207ENST00000478027 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
RPSA-207ENST00000478027 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
RPSA-207ENST00000478027 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
RPSA-207ENST00000478027 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
RPSA-207ENST00000478027 IFT172Q9UG01 1749 aa17.03■□□□□ 0.32
RPSA-207ENST00000478027 NUTM2DQ5VT03 806 aaPredicted RBP17.02■□□□□ 0.32
RPSA-207ENST00000478027 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.32
RPSA-207ENST00000478027 XIRP1Q702N8 1843 aaKnown RBP17.02■□□□□ 0.31
RPSA-207ENST00000478027 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.31
RPSA-207ENST00000478027 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.31
RPSA-207ENST00000478027 BCANQ96GW7 911 aa17.01■□□□□ 0.31
RPSA-207ENST00000478027 LRRC7Q96NW7 1537 aa17.01■□□□□ 0.31
RPSA-207ENST00000478027 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
RPSA-207ENST00000478027 TBX22Q9Y458 520 aa17■□□□□ 0.31
RPSA-207ENST00000478027 ANKRD30BQ9BXX2 1392 aa16.99■□□□□ 0.31
RPSA-207ENST00000478027 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
RPSA-207ENST00000478027 KCNA6P17658 529 aa16.98■□□□□ 0.31
RPSA-207ENST00000478027 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
RPSA-207ENST00000478027 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
RPSA-207ENST00000478027 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
RPSA-207ENST00000478027 VGFO15240 615 aaPredicted RBP16.96■□□□□ 0.31
RPSA-207ENST00000478027 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
RPSA-207ENST00000478027 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
RPSA-207ENST00000478027 ALKQ9UM73 1620 aa16.92■□□□□ 0.3
RPSA-207ENST00000478027 PTPRUQ92729 1446 aa16.9■□□□□ 0.3
RPSA-207ENST00000478027 UBAP1LF5GYI3 381 aa16.9■□□□□ 0.3
RPSA-207ENST00000478027 TMEM94Q12767 1356 aa16.89■□□□□ 0.3
RPSA-207ENST00000478027 MYOM2P54296 1465 aa16.89■□□□□ 0.29
RPSA-207ENST00000478027 METP08581 1390 aa16.89■□□□□ 0.29
RPSA-207ENST00000478027 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
RPSA-207ENST00000478027 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
RPSA-207ENST00000478027 NCOA3Q9Y6Q9 1424 aa16.87■□□□□ 0.29
RPSA-207ENST00000478027 NRXN1Q9ULB1 1477 aa16.87■□□□□ 0.29
RPSA-207ENST00000478027 TOM1O60784 492 aa16.87■□□□□ 0.29
RPSA-207ENST00000478027 LAMC1P11047 1609 aa16.87■□□□□ 0.29
RPSA-207ENST00000478027 ADGRF5Q8IZF2 1346 aa16.87■□□□□ 0.29
RPSA-207ENST00000478027 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
RPSA-207ENST00000478027 PRAG1Q86YV5 1406 aa16.85■□□□□ 0.29
RPSA-207ENST00000478027 DISP3Q9P2K9 1392 aa16.84■□□□□ 0.29
RPSA-207ENST00000478027 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
RPSA-207ENST00000478027 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
RPSA-207ENST00000478027 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
RPSA-207ENST00000478027 PTCH1Q13635 1447 aa16.81■□□□□ 0.28
RPSA-207ENST00000478027 MSH6P52701 1360 aa16.81■□□□□ 0.28
RPSA-207ENST00000478027 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
RPSA-207ENST00000478027 STAC3Q96MF2 364 aa16.81■□□□□ 0.28
RPSA-207ENST00000478027 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
RPSA-207ENST00000478027 NALCNQ8IZF0 1738 aa16.79■□□□□ 0.28
RPSA-207ENST00000478027 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
RPSA-207ENST00000478027 TECPR2O15040 1411 aa16.78■□□□□ 0.28
RPSA-207ENST00000478027 PIP4K2BP78356 416 aa16.77■□□□□ 0.28
RPSA-207ENST00000478027 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
RPSA-207ENST00000478027 DCCP43146 1447 aa16.77■□□□□ 0.27
RPSA-207ENST00000478027 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
RPSA-207ENST00000478027 C19orf44Q9H6X5 657 aa16.76■□□□□ 0.27
RPSA-207ENST00000478027 LRPPRCP42704 1394 aaKnown RBP16.76■□□□□ 0.27
RPSA-207ENST00000478027 ROBO2Q9HCK4 1378 aa16.76■□□□□ 0.27
RPSA-207ENST00000478027 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
RPSA-207ENST00000478027 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
RPSA-207ENST00000478027 ADGRL3Q9HAR2 1447 aa16.75■□□□□ 0.27
RPSA-207ENST00000478027 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
RPSA-207ENST00000478027 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
RPSA-207ENST00000478027 FAM135BQ49AJ0 1406 aa16.74■□□□□ 0.27
RPSA-207ENST00000478027 YTHDC2Q9H6S0 1430 aaKnown RBP16.74■□□□□ 0.27
RPSA-207ENST00000478027 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
RPSA-207ENST00000478027 ABCC11Q96J66 1382 aa16.74■□□□□ 0.27
RPSA-207ENST00000478027 CFAP70Q5T0N1 1121 aa16.73■□□□□ 0.27
RPSA-207ENST00000478027 HSPA1LP34931 641 aa16.72■□□□□ 0.27
RPSA-207ENST00000478027 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
RPSA-207ENST00000478027 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
RPSA-207ENST00000478027 ILDR2Q71H61 639 aa16.71■□□□□ 0.27
RPSA-207ENST00000478027 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
RPSA-207ENST00000478027 ATF3P18847 181 aa16.7■□□□□ 0.26
RPSA-207ENST00000478027 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
RPSA-207ENST00000478027 DLC1Q96QB1 1528 aa16.7■□□□□ 0.26
RPSA-207ENST00000478027 STK26Q9P289 416 aa16.69■□□□□ 0.26
RPSA-207ENST00000478027 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
RPSA-207ENST00000478027 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
RPSA-207ENST00000478027 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
RPSA-207ENST00000478027 PCGF6Q9BYE7 350 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms