RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
ERCC8-205ENST00000477893 FBXO41Q8TF61 875 aa12.68□□□□□ -0.38
ERCC8-205ENST00000477893 ANKRD50Q9ULJ7 1429 aa12.68□□□□□ -0.38
ERCC8-205ENST00000477893 SPATA31D1Q6ZQQ2 1576 aa12.68□□□□□ -0.38
ERCC8-205ENST00000477893 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
ERCC8-205ENST00000477893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.68□□□□□ -0.38
ERCC8-205ENST00000477893 NLRP1Q9C000 1473 aa12.67□□□□□ -0.38
ERCC8-205ENST00000477893 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
ERCC8-205ENST00000477893 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
ERCC8-205ENST00000477893 PKD2Q13563 968 aa12.65□□□□□ -0.38
ERCC8-205ENST00000477893 ZNF335Q9H4Z2 1342 aaPredicted RBP12.64□□□□□ -0.39
ERCC8-205ENST00000477893 POLR1AO95602 1720 aaPredicted RBP12.64□□□□□ -0.39
ERCC8-205ENST00000477893 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
ERCC8-205ENST00000477893 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
ERCC8-205ENST00000477893 VWDEQ8N2E2 1590 aa12.63□□□□□ -0.39
ERCC8-205ENST00000477893 NEURL4Q96JN8 1562 aa12.63□□□□□ -0.39
ERCC8-205ENST00000477893 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
ERCC8-205ENST00000477893 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
ERCC8-205ENST00000477893 ANKLE2Q86XL3 938 aa12.62□□□□□ -0.39
ERCC8-205ENST00000477893 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
ERCC8-205ENST00000477893 LMTK2Q8IWU2 1503 aa12.62□□□□□ -0.39
ERCC8-205ENST00000477893 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
ERCC8-205ENST00000477893 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
ERCC8-205ENST00000477893 UBR1Q8IWV7 1749 aa12.6□□□□□ -0.39
ERCC8-205ENST00000477893 PIK3C2BO00750 1634 aa12.6□□□□□ -0.39
ERCC8-205ENST00000477893 RRBP1Q9P2E9 1410 aaKnown RBP12.6□□□□□ -0.39
ERCC8-205ENST00000477893 UNC13BO14795 1591 aa12.6□□□□□ -0.39
ERCC8-205ENST00000477893 SYNMO15061 1565 aa12.6□□□□□ -0.39
ERCC8-205ENST00000477893 NPHP4O75161 1426 aaPredicted RBP12.59□□□□□ -0.39
ERCC8-205ENST00000477893 TET3O43151 1660 aa12.57□□□□□ -0.4
ERCC8-205ENST00000477893 IQGAP1P46940 1657 aa12.57□□□□□ -0.4
ERCC8-205ENST00000477893 NUP155O75694 1391 aa12.56□□□□□ -0.4
ERCC8-205ENST00000477893 IDI1Q13907 227 aa12.56□□□□□ -0.4
ERCC8-205ENST00000477893 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
ERCC8-205ENST00000477893 NOS1P29475 1434 aa12.55□□□□□ -0.4
ERCC8-205ENST00000477893 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
ERCC8-205ENST00000477893 TXNDC2Q86VQ3 553 aa12.55□□□□□ -0.4
ERCC8-205ENST00000477893 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
ERCC8-205ENST00000477893 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
ERCC8-205ENST00000477893 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
ERCC8-205ENST00000477893 LTKP29376 864 aa12.54□□□□□ -0.4
ERCC8-205ENST00000477893 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
ERCC8-205ENST00000477893 E9PCH4 1651 aa12.54□□□□□ -0.4
ERCC8-205ENST00000477893 MED14O60244 1454 aa12.53□□□□□ -0.4
ERCC8-205ENST00000477893 RPRD2Q5VT52 1461 aaKnown RBP12.53□□□□□ -0.4
ERCC8-205ENST00000477893 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
ERCC8-205ENST00000477893 TMEM2Q9UHN6 1383 aa12.53□□□□□ -0.4
ERCC8-205ENST00000477893 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
ERCC8-205ENST00000477893 SLIT1O75093 1534 aa12.52□□□□□ -0.4
ERCC8-205ENST00000477893 UBAP1LF5GYI3 381 aa12.52□□□□□ -0.41
ERCC8-205ENST00000477893 BCANQ96GW7 911 aa12.52□□□□□ -0.41
ERCC8-205ENST00000477893 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
ERCC8-205ENST00000477893 NAIPQ13075 1403 aa12.51□□□□□ -0.41
ERCC8-205ENST00000477893 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
ERCC8-205ENST00000477893 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
ERCC8-205ENST00000477893 CPS1P31327 1500 aa12.49□□□□□ -0.41
ERCC8-205ENST00000477893 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-205ENST00000477893 NUTM2DQ5VT03 806 aaPredicted RBP12.49□□□□□ -0.41
ERCC8-205ENST00000477893 TRIM52Q96A61 297 aa12.49□□□□□ -0.41
ERCC8-205ENST00000477893 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
ERCC8-205ENST00000477893 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
ERCC8-205ENST00000477893 SLC26A8Q96RN1 970 aa12.47□□□□□ -0.41
ERCC8-205ENST00000477893 STRCP1A6NGW2 1772 aa12.47□□□□□ -0.41
ERCC8-205ENST00000477893 KDM5AP29375 1690 aaKnown RBP12.47□□□□□ -0.41
ERCC8-205ENST00000477893 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
ERCC8-205ENST00000477893 RIMS2Q9UQ26 1411 aa12.46□□□□□ -0.41
ERCC8-205ENST00000477893 TMEM131LA2VDJ0 1609 aa12.46□□□□□ -0.41
ERCC8-205ENST00000477893 CLCN6P51797 869 aa12.45□□□□□ -0.42
ERCC8-205ENST00000477893 SPHKAPQ2M3C7 1700 aa12.45□□□□□ -0.42
ERCC8-205ENST00000477893 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
ERCC8-205ENST00000477893 ZFYVE9O95405 1425 aa12.44□□□□□ -0.42
ERCC8-205ENST00000477893 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
ERCC8-205ENST00000477893 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
ERCC8-205ENST00000477893 TOM1O60784 492 aa12.41□□□□□ -0.42
ERCC8-205ENST00000477893 CLTCL1P53675 1640 aa12.4□□□□□ -0.42
ERCC8-205ENST00000477893 TRPM2O94759 1503 aa12.4□□□□□ -0.42
ERCC8-205ENST00000477893 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
ERCC8-205ENST00000477893 HDGFP51858 240 aaKnown RBP12.39□□□□□ -0.43
ERCC8-205ENST00000477893 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
ERCC8-205ENST00000477893 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.38□□□□□ -0.43
ERCC8-205ENST00000477893 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
ERCC8-205ENST00000477893 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
ERCC8-205ENST00000477893 KCNA6P17658 529 aa12.37□□□□□ -0.43
ERCC8-205ENST00000477893 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
ERCC8-205ENST00000477893 HSPA1LP34931 641 aa12.36□□□□□ -0.43
ERCC8-205ENST00000477893 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
ERCC8-205ENST00000477893 NWD1Q149M9 1564 aa12.35□□□□□ -0.43
ERCC8-205ENST00000477893 XIRP1Q702N8 1843 aaKnown RBP12.35□□□□□ -0.43
ERCC8-205ENST00000477893 ADAMTS13Q76LX8 1427 aa12.35□□□□□ -0.43
ERCC8-205ENST00000477893 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
ERCC8-205ENST00000477893 DISP3Q9P2K9 1392 aa12.34□□□□□ -0.43
ERCC8-205ENST00000477893 C14orf37Q86TY3 774 aa12.33□□□□□ -0.44
ERCC8-205ENST00000477893 SETD5Q9C0A6 1442 aa12.33□□□□□ -0.44
ERCC8-205ENST00000477893 KIF1BO60333 1816 aa12.32□□□□□ -0.44
ERCC8-205ENST00000477893 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
ERCC8-205ENST00000477893 DIP2AQ14689 1571 aa12.32□□□□□ -0.44
ERCC8-205ENST00000477893 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
ERCC8-205ENST00000477893 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
ERCC8-205ENST00000477893 MPHOSPH9Q99550 1183 aa12.32□□□□□ -0.44
ERCC8-205ENST00000477893 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms