RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
RNF220-211ENST00000474956 LRPPRCP42704 1394 aaKnown RBP16.73■□□□□ 0.27
RNF220-211ENST00000474956 EFCAB6Q5THR3 1501 aa16.73■□□□□ 0.27
RNF220-211ENST00000474956 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
RNF220-211ENST00000474956 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
RNF220-211ENST00000474956 ABCA6Q8N139 1617 aa16.71■□□□□ 0.27
RNF220-211ENST00000474956 NPATQ14207 1427 aa16.7■□□□□ 0.26
RNF220-211ENST00000474956 NUDCQ9Y266 331 aa16.7■□□□□ 0.26
RNF220-211ENST00000474956 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
RNF220-211ENST00000474956 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
RNF220-211ENST00000474956 SMG6Q86US8 1419 aaKnown RBP16.69■□□□□ 0.26
RNF220-211ENST00000474956 CDCA7LQ96GN5 454 aa16.69■□□□□ 0.26
RNF220-211ENST00000474956 NOS1P29475 1434 aa16.68■□□□□ 0.26
RNF220-211ENST00000474956 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
RNF220-211ENST00000474956 KIF1BO60333 1816 aa16.67■□□□□ 0.26
RNF220-211ENST00000474956 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
RNF220-211ENST00000474956 YEATS2Q9ULM3 1422 aa16.66■□□□□ 0.26
RNF220-211ENST00000474956 MAP3K4Q9Y6R4 1608 aa16.66■□□□□ 0.26
RNF220-211ENST00000474956 TRAK1Q9UPV9 953 aa16.65■□□□□ 0.26
RNF220-211ENST00000474956 SIGLEC1Q9BZZ2 1709 aa16.64■□□□□ 0.25
RNF220-211ENST00000474956 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
RNF220-211ENST00000474956 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
RNF220-211ENST00000474956 KNSTRNQ9Y448 316 aa16.63■□□□□ 0.25
RNF220-211ENST00000474956 MYOM1P52179 1685 aa16.63■□□□□ 0.25
RNF220-211ENST00000474956 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
RNF220-211ENST00000474956 ADAMTS8Q9UP79 889 aa16.62■□□□□ 0.25
RNF220-211ENST00000474956 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
RNF220-211ENST00000474956 CARD14Q9BXL6 1004 aa16.61■□□□□ 0.25
RNF220-211ENST00000474956 ABCC3O15438 1527 aa16.61■□□□□ 0.25
RNF220-211ENST00000474956 ERVK-7P63135 1459 aa16.6■□□□□ 0.25
RNF220-211ENST00000474956 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
RNF220-211ENST00000474956 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
RNF220-211ENST00000474956 LMTK2Q8IWU2 1503 aa16.59■□□□□ 0.25
RNF220-211ENST00000474956 SAFB2Q14151 953 aaKnown RBP eCLIP16.58■□□□□ 0.25
RNF220-211ENST00000474956 MYOM2P54296 1465 aa16.58■□□□□ 0.25
RNF220-211ENST00000474956 CFAP74Q9C0B2 1584 aa16.58■□□□□ 0.24
RNF220-211ENST00000474956 TSPOAP1O95153 1857 aa16.58■□□□□ 0.24
RNF220-211ENST00000474956 FAM69CQ0P6D2 419 aa16.58■□□□□ 0.24
RNF220-211ENST00000474956 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.24
RNF220-211ENST00000474956 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
RNF220-211ENST00000474956 CCDC146Q8IYE0 955 aa16.56■□□□□ 0.24
RNF220-211ENST00000474956 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
RNF220-211ENST00000474956 PLIN1O60240 522 aa16.56■□□□□ 0.24
RNF220-211ENST00000474956 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
RNF220-211ENST00000474956 IDI1Q13907 227 aa16.56■□□□□ 0.24
RNF220-211ENST00000474956 SYNMO15061 1565 aa16.55■□□□□ 0.24
RNF220-211ENST00000474956 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
RNF220-211ENST00000474956 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
RNF220-211ENST00000474956 NRXN1Q9ULB1 1477 aa16.55■□□□□ 0.24
RNF220-211ENST00000474956 KIAA1210Q9ULL0 1709 aa16.55■□□□□ 0.24
RNF220-211ENST00000474956 SLC12A5Q9H2X9 1139 aa16.55■□□□□ 0.24
RNF220-211ENST00000474956 PPLO60437 1756 aa16.55■□□□□ 0.24
RNF220-211ENST00000474956 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
RNF220-211ENST00000474956 KDM5AP29375 1690 aaKnown RBP16.54■□□□□ 0.24
RNF220-211ENST00000474956 NEO1Q92859 1461 aa16.54■□□□□ 0.24
RNF220-211ENST00000474956 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
RNF220-211ENST00000474956 CCDC136Q96JN2 1154 aa16.53■□□□□ 0.24
RNF220-211ENST00000474956 C14orf93Q9H972 538 aaKnown RBP16.53■□□□□ 0.24
RNF220-211ENST00000474956 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
RNF220-211ENST00000474956 ASXL1Q8IXJ9 1541 aa16.53■□□□□ 0.24
RNF220-211ENST00000474956 STAC3Q96MF2 364 aa16.52■□□□□ 0.24
RNF220-211ENST00000474956 STK26Q9P289 416 aa16.52■□□□□ 0.24
RNF220-211ENST00000474956 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.24
RNF220-211ENST00000474956 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.24
RNF220-211ENST00000474956 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.24
RNF220-211ENST00000474956 BLMP54132 1417 aaPredicted RBP16.52■□□□□ 0.24
RNF220-211ENST00000474956 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.23
RNF220-211ENST00000474956 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.23
RNF220-211ENST00000474956 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.23
RNF220-211ENST00000474956 CDCA8Q53HL2 280 aa16.51■□□□□ 0.23
RNF220-211ENST00000474956 MYO5BQ9ULV0 1848 aa16.51■□□□□ 0.23
RNF220-211ENST00000474956 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
RNF220-211ENST00000474956 MLECQ14165 292 aa16.5■□□□□ 0.23
RNF220-211ENST00000474956 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
RNF220-211ENST00000474956 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
RNF220-211ENST00000474956 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
RNF220-211ENST00000474956 QRICH2Q9H0J4 1663 aa16.47■□□□□ 0.23
RNF220-211ENST00000474956 DEKP35659 375 aaKnown RBP16.47■□□□□ 0.23
RNF220-211ENST00000474956 ANP32AP39687 249 aaKnown RBP16.47■□□□□ 0.23
RNF220-211ENST00000474956 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
RNF220-211ENST00000474956 SKAP1Q86WV1 359 aa16.46■□□□□ 0.23
RNF220-211ENST00000474956 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
RNF220-211ENST00000474956 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
RNF220-211ENST00000474956 PIK3C2BO00750 1634 aa16.45■□□□□ 0.22
RNF220-211ENST00000474956 C20orf194Q5TEA3 1177 aa16.45■□□□□ 0.22
RNF220-211ENST00000474956 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
RNF220-211ENST00000474956 NSD3Q9BZ95 1437 aa16.45■□□□□ 0.22
RNF220-211ENST00000474956 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
RNF220-211ENST00000474956 GLI2P10070 1586 aa16.44■□□□□ 0.22
RNF220-211ENST00000474956 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
RNF220-211ENST00000474956 IPO9Q96P70 1041 aaKnown RBP16.44■□□□□ 0.22
RNF220-211ENST00000474956 APAF1O14727 1248 aa16.43■□□□□ 0.22
RNF220-211ENST00000474956 ZC3H13Q5T200 1668 aaKnown RBP16.43■□□□□ 0.22
RNF220-211ENST00000474956 ZMYM4Q5VZL5 1548 aa16.43■□□□□ 0.22
RNF220-211ENST00000474956 DIP2BQ9P265 1576 aa16.43■□□□□ 0.22
RNF220-211ENST00000474956 SETBP1Q9Y6X0 1596 aa16.42■□□□□ 0.22
RNF220-211ENST00000474956 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
RNF220-211ENST00000474956 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
RNF220-211ENST00000474956 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
RNF220-211ENST00000474956 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms