RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TONSLQ96HA7 1378 aa5.55□□□□□ -1.52
USP16-205ENST00000474835 CHD2O14647 1828 aaKnown RBP5.55□□□□□ -1.52
USP16-205ENST00000474835 ARAP3Q8WWN8 1544 aa5.55□□□□□ -1.52
USP16-205ENST00000474835 KIF15Q9NS87 1388 aa5.54□□□□□ -1.52
USP16-205ENST00000474835 DCAF8L2P0C7V8 631 aa5.54□□□□□ -1.52
USP16-205ENST00000474835 NFKBIBQ15653 356 aa5.54□□□□□ -1.52
USP16-205ENST00000474835 NCBP3Q53F19 620 aaKnown RBP5.54□□□□□ -1.52
USP16-205ENST00000474835 COL3A1P02461 1466 aaPredicted RBP5.54□□□□□ -1.52
USP16-205ENST00000474835 PDE3BQ13370 1112 aa5.54□□□□□ -1.52
USP16-205ENST00000474835 GLI2P10070 1586 aa5.53□□□□□ -1.52
USP16-205ENST00000474835 PKNOX2Q96KN3 472 aa5.53□□□□□ -1.52
USP16-205ENST00000474835 MED14O60244 1454 aa5.53□□□□□ -1.52
USP16-205ENST00000474835 FRAT1Q92837 279 aaPredicted RBP5.53□□□□□ -1.52
USP16-205ENST00000474835 PTPRTO14522 1441 aa5.53□□□□□ -1.52
USP16-205ENST00000474835 USP54Q70EL1 1684 aa5.53□□□□□ -1.52
USP16-205ENST00000474835 ERCC6Q03468 1493 aa5.52□□□□□ -1.53
USP16-205ENST00000474835 PPM1GO15355 546 aaPredicted RBP5.52□□□□□ -1.53
USP16-205ENST00000474835 FRMPD1Q5SYB0 1578 aa5.52□□□□□ -1.53
USP16-205ENST00000474835 MYOM2P54296 1465 aa5.52□□□□□ -1.53
USP16-205ENST00000474835 USP47Q96K76 1375 aa5.52□□□□□ -1.53
USP16-205ENST00000474835 RRP9O43818 475 aaKnown RBP5.52□□□□□ -1.53
USP16-205ENST00000474835 ERBINQ96RT1 1412 aa5.52□□□□□ -1.53
USP16-205ENST00000474835 RGPD1P0DJD0 1748 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 ERBB4Q15303 1308 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 L3MBTL2Q969R5 705 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 KIF20BQ96Q89 1820 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 PLEKHH1Q9ULM0 1364 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 HNRNPUQ00839 825 aaKnown RBP eCLIP5.51□□□□□ -1.53
USP16-205ENST00000474835 DAXXQ9UER7 740 aaPredicted RBP5.51□□□□□ -1.53
USP16-205ENST00000474835 DLG5Q8TDM6 1919 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 LMTK2Q8IWU2 1503 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 NEFLP07196 543 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 CALD1Q05682 793 aaKnown RBP5.51□□□□□ -1.53
USP16-205ENST00000474835 TMEM131LA2VDJ0 1609 aa5.51□□□□□ -1.53
USP16-205ENST00000474835 NINLQ9Y2I6 1382 aa5.5□□□□□ -1.53
USP16-205ENST00000474835 EFCAB6Q5THR3 1501 aa5.5□□□□□ -1.53
USP16-205ENST00000474835 ASXL1Q8IXJ9 1541 aa5.5□□□□□ -1.53
USP16-205ENST00000474835 TROQ12816 1431 aaPredicted RBP5.5□□□□□ -1.53
USP16-205ENST00000474835 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
USP16-205ENST00000474835 COL22A1Q8NFW1 1626 aaPredicted RBP5.5□□□□□ -1.53
USP16-205ENST00000474835 NRKQ7Z2Y5 1582 aa5.49□□□□□ -1.53
USP16-205ENST00000474835 TESK2Q96S53 571 aa5.49□□□□□ -1.53
USP16-205ENST00000474835 MPHOSPH9Q99550 1183 aa5.49□□□□□ -1.53
USP16-205ENST00000474835 LRRC37A3O60309 1634 aa5.49□□□□□ -1.53
USP16-205ENST00000474835 CFAP65Q6ZU64 1925 aaKnown RBP5.49□□□□□ -1.53
USP16-205ENST00000474835 HECW2Q9P2P5 1572 aa5.49□□□□□ -1.53
USP16-205ENST00000474835 EIF4G2P78344 907 aaKnown RBP eCLIP5.49□□□□□ -1.532e-6■■■□□ 15.2
USP16-205ENST00000474835 FANCAO15360 1455 aa5.49□□□□□ -1.53
USP16-205ENST00000474835 NALCNQ8IZF0 1738 aa5.48□□□□□ -1.53
USP16-205ENST00000474835 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.48□□□□□ -1.53
USP16-205ENST00000474835 LRRC7Q96NW7 1537 aa5.48□□□□□ -1.53
USP16-205ENST00000474835 KIF1BO60333 1816 aa5.48□□□□□ -1.53
USP16-205ENST00000474835 SIGLEC1Q9BZZ2 1709 aa5.48□□□□□ -1.53
USP16-205ENST00000474835 PPP1R9BQ96SB3 815 aa5.48□□□□□ -1.53
USP16-205ENST00000474835 ZMYND15Q9H091 742 aa5.48□□□□□ -1.53
USP16-205ENST00000474835 ADGRB3O60242 1522 aa5.47□□□□□ -1.53
USP16-205ENST00000474835 MED1Q15648 1581 aaPredicted RBP5.47□□□□□ -1.53
USP16-205ENST00000474835 ABCC1P33527 1531 aa5.47□□□□□ -1.53
USP16-205ENST00000474835 DUSP27Q5VZP5 1158 aa5.47□□□□□ -1.53
USP16-205ENST00000474835 IL17RAQ96F46 866 aa5.47□□□□□ -1.53
USP16-205ENST00000474835 NKTRP30414 1462 aaKnown RBP5.47□□□□□ -1.53
USP16-205ENST00000474835 EXOC6Q8TAG9 804 aa5.46□□□□□ -1.53
USP16-205ENST00000474835 RALBP1Q15311 655 aa5.46□□□□□ -1.54
USP16-205ENST00000474835 ZBTB47Q9UFB7 747 aaPredicted RBP5.46□□□□□ -1.54
USP16-205ENST00000474835 ISY1Q9ULR0 285 aaKnown RBP5.46□□□□□ -1.54
USP16-205ENST00000474835 DIP2AQ14689 1571 aa5.46□□□□□ -1.54
USP16-205ENST00000474835 SBNO2Q9Y2G9 1366 aa5.46□□□□□ -1.54
USP16-205ENST00000474835 XRN1Q8IZH2 1706 aaKnown RBP5.46□□□□□ -1.54
USP16-205ENST00000474835 MARF1Q9Y4F3 1742 aaKnown RBP5.46□□□□□ -1.54
USP16-205ENST00000474835 RIPK4P57078 832 aa5.46□□□□□ -1.54
USP16-205ENST00000474835 IRX6P78412 446 aaPredicted RBP5.46□□□□□ -1.54
USP16-205ENST00000474835 PPIP5K1Q6PFW1 1433 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 ERVK-7P63135 1459 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 ZFYVE16Q7Z3T8 1539 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 XRCC6P12956 609 aaKnown RBP eCLIP5.45□□□□□ -1.541e-10■■■□□ 19.2
USP16-205ENST00000474835 UTP14CQ5TAP6 766 aaKnown RBP5.45□□□□□ -1.54
USP16-205ENST00000474835 PDLIM2Q96JY6 352 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 AKAP12Q02952 1782 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 DISP3Q9P2K9 1392 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 ABCC3O15438 1527 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP16-205ENST00000474835 IFT140Q96RY7 1462 aa5.45□□□□□ -1.54
USP16-205ENST00000474835 DDRGK1Q96HY6 314 aa5.44□□□□□ -1.54
USP16-205ENST00000474835 NOS1P29475 1434 aa5.44□□□□□ -1.54
USP16-205ENST00000474835 RIMS1Q86UR5 1692 aaKnown RBP5.44□□□□□ -1.54
USP16-205ENST00000474835 PIK3R4Q99570 1358 aa5.44□□□□□ -1.54
USP16-205ENST00000474835 TDRD9Q8NDG6 1382 aaKnown RBP5.44□□□□□ -1.54
USP16-205ENST00000474835 ANKRD30AQ9BXX3 1397 aa5.44□□□□□ -1.54
USP16-205ENST00000474835 DMRT2Q9Y5R5 561 aa5.44□□□□□ -1.54
USP16-205ENST00000474835 MON2Q7Z3U7 1717 aa5.44□□□□□ -1.54
USP16-205ENST00000474835 NEXMIFQ5QGS0 1516 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 ANP32AP39687 249 aaKnown RBP5.43□□□□□ -1.54
USP16-205ENST00000474835 CENPQQ7L2Z9 268 aaPredicted RBP5.43□□□□□ -1.54
USP16-205ENST00000474835 HIRIP3Q9BW71 556 aaPredicted RBP5.43□□□□□ -1.54
USP16-205ENST00000474835 FAM53CQ9NYF3 392 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 RIMBP3CA6NJZ7 1639 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 RIMBP3BA6NNM3 1639 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 RIMBP3Q9UFD9 1639 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 NEFMP07197 916 aa5.43□□□□□ -1.54
USP16-205ENST00000474835 HSP90AB1P08238 724 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms