RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 MROH1Q8NDA8 1641 aa6.6□□□□□ -1.35
TM4SF1-202ENST00000472441 PRDM15P57071 1507 aaPredicted RBP6.6□□□□□ -1.35
TM4SF1-202ENST00000472441 VWDEQ8N2E2 1590 aa6.6□□□□□ -1.35
TM4SF1-202ENST00000472441 CEP152O94986 1710 aa6.6□□□□□ -1.35
TM4SF1-202ENST00000472441 SIGLEC1Q9BZZ2 1709 aa6.6□□□□□ -1.35
TM4SF1-202ENST00000472441 ADAMTSL3P82987 1691 aa6.59□□□□□ -1.35
TM4SF1-202ENST00000472441 STAC3Q96MF2 364 aa6.59□□□□□ -1.35
TM4SF1-202ENST00000472441 RALBP1Q15311 655 aa6.59□□□□□ -1.35
TM4SF1-202ENST00000472441 SALL2Q9Y467 1007 aaPredicted RBP6.59□□□□□ -1.36
TM4SF1-202ENST00000472441 MYBBP1AQ9BQG0 1328 aaKnown RBP6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 EFCAB6Q5THR3 1501 aa6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 KTN1Q86UP2 1357 aaKnown RBP6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 NPATQ14207 1427 aa6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 YEATS2Q9ULM3 1422 aa6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 PER1O15534 1290 aaPredicted RBP6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 MLECQ14165 292 aa6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 PNISRQ8TF01 805 aaKnown RBP6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 MADDQ8WXG6 1647 aa6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 TRAK1Q9UPV9 953 aa6.58□□□□□ -1.36
TM4SF1-202ENST00000472441 COL17A1Q9UMD9 1497 aaPredicted RBP6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 TMEM132EQ6IEE7 984 aa6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 NOS1P29475 1434 aa6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 KIF1BO60333 1816 aa6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 PELP1Q8IZL8 1130 aaKnown RBP6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 KNSTRNQ9Y448 316 aa6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 SCAF11Q99590 1463 aaKnown RBP6.57□□□□□ -1.36
TM4SF1-202ENST00000472441 CDCA8Q53HL2 280 aa6.56□□□□□ -1.36
TM4SF1-202ENST00000472441 LAMC1P11047 1609 aa6.56□□□□□ -1.36
TM4SF1-202ENST00000472441 IDI1Q13907 227 aa6.56□□□□□ -1.36
TM4SF1-202ENST00000472441 NLRP13Q86W25 1043 aa6.56□□□□□ -1.36
TM4SF1-202ENST00000472441 EIF3AQ14152 1382 aaKnown RBP6.56□□□□□ -1.36
TM4SF1-202ENST00000472441 LMTK2Q8IWU2 1503 aa6.55□□□□□ -1.36
TM4SF1-202ENST00000472441 ABCC3O15438 1527 aa6.55□□□□□ -1.36
TM4SF1-202ENST00000472441 BRD4O60885 1362 aaPredicted RBP6.55□□□□□ -1.36
TM4SF1-202ENST00000472441 FBXO31Q5XUX0 539 aaPredicted RBP6.55□□□□□ -1.36
TM4SF1-202ENST00000472441 FER1L4A9Z1Z3 1794 aa6.55□□□□□ -1.36
TM4SF1-202ENST00000472441 STAG3Q9UJ98 1225 aa6.54□□□□□ -1.36
TM4SF1-202ENST00000472441 PPP6R1Q9UPN7 881 aa6.54□□□□□ -1.36
TM4SF1-202ENST00000472441 KDM5AP29375 1690 aaKnown RBP6.54□□□□□ -1.36
TM4SF1-202ENST00000472441 SAFB2Q14151 953 aaKnown RBP eCLIP6.54□□□□□ -1.36
TM4SF1-202ENST00000472441 PARD3Q8TEW0 1356 aa6.54□□□□□ -1.36
TM4SF1-202ENST00000472441 VGFO15240 615 aaPredicted RBP6.54□□□□□ -1.36
TM4SF1-202ENST00000472441 IQGAP1P46940 1657 aa6.53□□□□□ -1.36
TM4SF1-202ENST00000472441 C14orf93Q9H972 538 aaKnown RBP6.53□□□□□ -1.36
TM4SF1-202ENST00000472441 STK26Q9P289 416 aa6.53□□□□□ -1.36
TM4SF1-202ENST00000472441 ZNF142P52746 1687 aaPredicted RBP6.53□□□□□ -1.36
TM4SF1-202ENST00000472441 CENPJQ9HC77 1338 aaPredicted RBP6.53□□□□□ -1.36
TM4SF1-202ENST00000472441 MYOM2P54296 1465 aa6.53□□□□□ -1.36
TM4SF1-202ENST00000472441 RPGRIP1LQ68CZ1 1315 aa6.53□□□□□ -1.36
TM4SF1-202ENST00000472441 CAMSAP1Q5T5Y3 1602 aa6.52□□□□□ -1.37
TM4SF1-202ENST00000472441 SLC52A1Q9NWF4 448 aa6.52□□□□□ -1.37
TM4SF1-202ENST00000472441 ADGRB3O60242 1522 aa6.52□□□□□ -1.37
TM4SF1-202ENST00000472441 ESF1Q9H501 851 aaKnown RBP6.52□□□□□ -1.37
TM4SF1-202ENST00000472441 SLC24A1O60721 1099 aa6.51□□□□□ -1.37
TM4SF1-202ENST00000472441 AMER1Q5JTC6 1135 aaPredicted RBP6.51□□□□□ -1.37
TM4SF1-202ENST00000472441 NUDCQ9Y266 331 aa6.51□□□□□ -1.37
TM4SF1-202ENST00000472441 PPP2R1AP30153 589 aa6.51□□□□□ -1.37
TM4SF1-202ENST00000472441 SLC12A5Q9H2X9 1139 aa6.51□□□□□ -1.37
TM4SF1-202ENST00000472441 LRPPRCP42704 1394 aaKnown RBP6.51□□□□□ -1.37
TM4SF1-202ENST00000472441 TNNT2P45379 298 aaPredicted RBP6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 NEURL4Q96JN8 1562 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 IFT172Q9UG01 1749 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 KIAA1210Q9ULL0 1709 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 PIK3C2GO75747 1445 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 SYNMO15061 1565 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 WDR43Q15061 677 aaKnown RBP eCLIP6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 CARD14Q9BXL6 1004 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 ADAMTS8Q9UP79 889 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 ERVK-7P63135 1459 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 ADRA2BP18089 450 aa6.5□□□□□ -1.37
TM4SF1-202ENST00000472441 PPLO60437 1756 aa6.49□□□□□ -1.37
TM4SF1-202ENST00000472441 NRXN1Q9ULB1 1477 aa6.49□□□□□ -1.37
TM4SF1-202ENST00000472441 C3P01024 1663 aa6.49□□□□□ -1.37
TM4SF1-202ENST00000472441 ARHGAP31Q2M1Z3 1444 aa6.49□□□□□ -1.37
TM4SF1-202ENST00000472441 CABP2Q9NPB3 220 aa6.49□□□□□ -1.37
TM4SF1-202ENST00000472441 SMG6Q86US8 1419 aaKnown RBP6.49□□□□□ -1.37
TM4SF1-202ENST00000472441 B4GALNT3Q6L9W6 998 aa6.48□□□□□ -1.37
TM4SF1-202ENST00000472441 CDCA7LQ96GN5 454 aa6.48□□□□□ -1.37
TM4SF1-202ENST00000472441 TSHZ2Q9NRE2 1034 aa6.48□□□□□ -1.37
TM4SF1-202ENST00000472441 POGKQ9P215 609 aa6.48□□□□□ -1.37
TM4SF1-202ENST00000472441 TRHP20396 242 aaPredicted RBP6.48□□□□□ -1.37
TM4SF1-202ENST00000472441 PREX1Q8TCU6 1659 aa6.48□□□□□ -1.37
TM4SF1-202ENST00000472441 SRPK2P78362 688 aaKnown RBP6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 PPP4R2Q9NY27 417 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 ASXL1Q8IXJ9 1541 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 EVC2Q86UK5 1308 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 MINK1Q8N4C8 1332 aaPredicted RBP6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 CLTCQ00610 1675 aaKnown RBP6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 CCDC146Q8IYE0 955 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 PIK3C2BO00750 1634 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 MYO5BQ9ULV0 1848 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 NEXMIFQ5QGS0 1516 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 MORC1Q86VD1 984 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 PRAM1Q96QH2 718 aa6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 RIMS1Q86UR5 1692 aaKnown RBP6.47□□□□□ -1.37
TM4SF1-202ENST00000472441 SETBP1Q9Y6X0 1596 aa6.46□□□□□ -1.37
TM4SF1-202ENST00000472441 ADGRB1O14514 1584 aa6.46□□□□□ -1.38
TM4SF1-202ENST00000472441 MYOM1P52179 1685 aa6.46□□□□□ -1.38
TM4SF1-202ENST00000472441 SPATA31D1Q6ZQQ2 1576 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms