RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.43
NPHP4-207ENST00000470763 NAP1L5Q96NT1 182 aaPredicted RBP17.77■□□□□ 0.43
NPHP4-207ENST00000470763 ADGBQ8N7X0 1667 aa17.76■□□□□ 0.43
NPHP4-207ENST00000470763 PLEKHH2Q8IVE3 1493 aa17.76■□□□□ 0.43
NPHP4-207ENST00000470763 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.75■□□□□ 0.43
NPHP4-207ENST00000470763 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
NPHP4-207ENST00000470763 ANKRD30AQ9BXX3 1397 aa17.74■□□□□ 0.43
NPHP4-207ENST00000470763 DISP3Q9P2K9 1392 aa17.74■□□□□ 0.43
NPHP4-207ENST00000470763 CFAP74Q9C0B2 1584 aa17.74■□□□□ 0.43
NPHP4-207ENST00000470763 RGL3Q3MIN7 710 aa17.74■□□□□ 0.43
NPHP4-207ENST00000470763 L1TD1Q5T7N2 865 aaKnown RBP17.74■□□□□ 0.43
NPHP4-207ENST00000470763 VSIG10Q8N0Z9 540 aa17.73■□□□□ 0.43
NPHP4-207ENST00000470763 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
NPHP4-207ENST00000470763 IGHDP01880 384 aa17.73■□□□□ 0.43
NPHP4-207ENST00000470763 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
NPHP4-207ENST00000470763 BECN1Q14457 450 aa17.72■□□□□ 0.43
NPHP4-207ENST00000470763 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
NPHP4-207ENST00000470763 GLIPR1L2Q4G1C9 344 aa17.72■□□□□ 0.43
NPHP4-207ENST00000470763 GZF1Q9H116 711 aaPredicted RBP17.72■□□□□ 0.43
NPHP4-207ENST00000470763 BCAR3O75815 825 aa17.71■□□□□ 0.43
NPHP4-207ENST00000470763 PANK2Q9BZ23 570 aa17.71■□□□□ 0.43
NPHP4-207ENST00000470763 XRCC6P12956 609 aaKnown RBP eCLIP17.7■□□□□ 0.42
NPHP4-207ENST00000470763 SPRYD3Q8NCJ5 442 aa17.7■□□□□ 0.42
NPHP4-207ENST00000470763 PNNQ9H307 717 aaKnown RBP17.7■□□□□ 0.42
NPHP4-207ENST00000470763 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
NPHP4-207ENST00000470763 INSRP06213 1382 aa17.69■□□□□ 0.42
NPHP4-207ENST00000470763 VIRMAQ69YN4 1812 aaKnown RBP17.69■□□□□ 0.42
NPHP4-207ENST00000470763 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
NPHP4-207ENST00000470763 SCAPERQ9BY12 1400 aa17.68■□□□□ 0.42
NPHP4-207ENST00000470763 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
NPHP4-207ENST00000470763 EFCAB2Q5VUJ9 269 aa17.67■□□□□ 0.42
NPHP4-207ENST00000470763 ZMYND15Q9H091 742 aa17.67■□□□□ 0.42
NPHP4-207ENST00000470763 CDC42BPBQ9Y5S2 1711 aa17.67■□□□□ 0.42
NPHP4-207ENST00000470763 TESK2Q96S53 571 aa17.67■□□□□ 0.42
NPHP4-207ENST00000470763 ANTXR1Q9H6X2 564 aa17.67■□□□□ 0.42
NPHP4-207ENST00000470763 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
NPHP4-207ENST00000470763 GPATCH8Q9UKJ3 1502 aaKnown RBP17.66■□□□□ 0.42
NPHP4-207ENST00000470763 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
NPHP4-207ENST00000470763 GOLGA6L3A6NEY3 463 aa17.66■□□□□ 0.42
NPHP4-207ENST00000470763 ARHGAP5Q13017 1502 aa17.66■□□□□ 0.42
NPHP4-207ENST00000470763 POGZQ7Z3K3 1410 aa17.66■□□□□ 0.42
NPHP4-207ENST00000470763 SLFN5Q08AF3 891 aa17.66■□□□□ 0.42
NPHP4-207ENST00000470763 PRAG1Q86YV5 1406 aa17.66■□□□□ 0.42
NPHP4-207ENST00000470763 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
NPHP4-207ENST00000470763 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
NPHP4-207ENST00000470763 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-207ENST00000470763 KDM5DQ9BY66 1539 aa17.65■□□□□ 0.42
NPHP4-207ENST00000470763 EIF3AQ14152 1382 aaKnown RBP17.65■□□□□ 0.42
NPHP4-207ENST00000470763 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
NPHP4-207ENST00000470763 PPP2R1AP30153 589 aa17.64■□□□□ 0.41
NPHP4-207ENST00000470763 PREX2Q70Z35 1606 aa17.63■□□□□ 0.41
NPHP4-207ENST00000470763 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
NPHP4-207ENST00000470763 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
NPHP4-207ENST00000470763 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
NPHP4-207ENST00000470763 ERBINQ96RT1 1412 aa17.62■□□□□ 0.41
NPHP4-207ENST00000470763 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
NPHP4-207ENST00000470763 CDC42BPAQ5VT25 1732 aa17.62■□□□□ 0.41
NPHP4-207ENST00000470763 SIGLEC1Q9BZZ2 1709 aa17.62■□□□□ 0.41
NPHP4-207ENST00000470763 CLCN1P35523 988 aa17.61■□□□□ 0.41
NPHP4-207ENST00000470763 TMF1P82094 1093 aa17.61■□□□□ 0.41
NPHP4-207ENST00000470763 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
NPHP4-207ENST00000470763 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
NPHP4-207ENST00000470763 ZFYVE16Q7Z3T8 1539 aa17.6■□□□□ 0.41
NPHP4-207ENST00000470763 MAGI2Q86UL8 1455 aa17.6■□□□□ 0.41
NPHP4-207ENST00000470763 C9orf84Q5VXU9 1444 aa17.6■□□□□ 0.41
NPHP4-207ENST00000470763 APAF1O14727 1248 aa17.6■□□□□ 0.41
NPHP4-207ENST00000470763 AFAP1Q8N556 730 aa17.6■□□□□ 0.41
NPHP4-207ENST00000470763 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
NPHP4-207ENST00000470763 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
NPHP4-207ENST00000470763 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
NPHP4-207ENST00000470763 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
NPHP4-207ENST00000470763 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
NPHP4-207ENST00000470763 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
NPHP4-207ENST00000470763 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
NPHP4-207ENST00000470763 CCDC144AA2RUR9 1427 aa17.58■□□□□ 0.4
NPHP4-207ENST00000470763 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
NPHP4-207ENST00000470763 MCM4P33991 863 aa17.58■□□□□ 0.4
NPHP4-207ENST00000470763 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.4
NPHP4-207ENST00000470763 ZNF518AQ6AHZ1 1483 aa17.57■□□□□ 0.4
NPHP4-207ENST00000470763 ABCC1P33527 1531 aa17.57■□□□□ 0.4
NPHP4-207ENST00000470763 TSPY4P0CV99 314 aa17.56■□□□□ 0.4
NPHP4-207ENST00000470763 TSPY10P0CW01 314 aa17.56■□□□□ 0.4
NPHP4-207ENST00000470763 TRMT2AQ8IZ69 625 aaKnown RBP17.56■□□□□ 0.4
NPHP4-207ENST00000470763 TBC1D32Q96NH3 1257 aa17.56■□□□□ 0.4
NPHP4-207ENST00000470763 RRP9O43818 475 aaKnown RBP17.56■□□□□ 0.4
NPHP4-207ENST00000470763 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
NPHP4-207ENST00000470763 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
NPHP4-207ENST00000470763 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
NPHP4-207ENST00000470763 PRDM15P57071 1507 aaPredicted RBP17.54■□□□□ 0.4
NPHP4-207ENST00000470763 A2MP01023 1474 aa17.54■□□□□ 0.4
NPHP4-207ENST00000470763 SAMD9LQ8IVG5 1584 aa17.54■□□□□ 0.4
NPHP4-207ENST00000470763 TRAK2O60296 914 aa17.53■□□□□ 0.4
NPHP4-207ENST00000470763 HNRNPMP52272 730 aaKnown RBP eCLIP17.53■□□□□ 0.4
NPHP4-207ENST00000470763 MADDQ8WXG6 1647 aa17.53■□□□□ 0.4
NPHP4-207ENST00000470763 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
NPHP4-207ENST00000470763 PTPRMP28827 1452 aa17.52■□□□□ 0.4
NPHP4-207ENST00000470763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
NPHP4-207ENST00000470763 ATP10AO60312 1499 aa17.52■□□□□ 0.4
NPHP4-207ENST00000470763 ERBB4Q15303 1308 aa17.52■□□□□ 0.39
NPHP4-207ENST00000470763 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms