RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 KIF7Q2M1P5 1343 aa22.74■■□□□ 1.23
PGAP1-208ENST00000470179 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
PGAP1-208ENST00000470179 SPATA31D1Q6ZQQ2 1576 aa22.73■■□□□ 1.23
PGAP1-208ENST00000470179 ZMYM3Q14202 1370 aa22.72■■□□□ 1.23
PGAP1-208ENST00000470179 SKAP1Q86WV1 359 aa22.72■■□□□ 1.23
PGAP1-208ENST00000470179 CCDC7Q96M83 1385 aa22.72■■□□□ 1.23
PGAP1-208ENST00000470179 NEURL4Q96JN8 1562 aa22.71■■□□□ 1.23
PGAP1-208ENST00000470179 ERVK-7P63135 1459 aa22.7■■□□□ 1.22
PGAP1-208ENST00000470179 NOP58Q9Y2X3 529 aaKnown RBP22.7■■□□□ 1.22
PGAP1-208ENST00000470179 PIK3C2BO00750 1634 aa22.7■■□□□ 1.22
PGAP1-208ENST00000470179 MADDQ8WXG6 1647 aa22.7■■□□□ 1.22
PGAP1-208ENST00000470179 ESF1Q9H501 851 aaKnown RBP22.7■■□□□ 1.22
PGAP1-208ENST00000470179 SYNMO15061 1565 aa22.69■■□□□ 1.22
PGAP1-208ENST00000470179 CCDC144AA2RUR9 1427 aa22.68■■□□□ 1.22
PGAP1-208ENST00000470179 CCDC136Q96JN2 1154 aa22.68■■□□□ 1.22
PGAP1-208ENST00000470179 RTN4Q9NQC3 1192 aaKnown RBP22.68■■□□□ 1.22
PGAP1-208ENST00000470179 C3P01024 1663 aa22.67■■□□□ 1.22
PGAP1-208ENST00000470179 CLTCL1P53675 1640 aa22.67■■□□□ 1.22
PGAP1-208ENST00000470179 ZBED9Q6R2W3 1325 aa22.66■■□□□ 1.22
PGAP1-208ENST00000470179 RIMS1Q86UR5 1692 aaKnown RBP22.64■■□□□ 1.21
PGAP1-208ENST00000470179 CFAP65Q6ZU64 1925 aaKnown RBP22.64■■□□□ 1.21
PGAP1-208ENST00000470179 SPATA31E1Q6ZUB1 1445 aa22.61■■□□□ 1.21
PGAP1-208ENST00000470179 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
PGAP1-208ENST00000470179 KIF1BO60333 1816 aa22.6■■□□□ 1.21
PGAP1-208ENST00000470179 FBXO31Q5XUX0 539 aaPredicted RBP22.59■■□□□ 1.21
PGAP1-208ENST00000470179 UGGT1Q9NYU2 1555 aa22.59■■□□□ 1.21
PGAP1-208ENST00000470179 LAS1LQ9Y4W2 734 aaKnown RBP22.59■■□□□ 1.21
PGAP1-208ENST00000470179 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
PGAP1-208ENST00000470179 KDM5AP29375 1690 aaKnown RBP22.57■■□□□ 1.2
PGAP1-208ENST00000470179 TNRQ92752 1358 aa22.56■■□□□ 1.2
PGAP1-208ENST00000470179 KDM2AQ9Y2K7 1162 aa22.56■■□□□ 1.2
PGAP1-208ENST00000470179 ANO8Q9HCE9 1232 aaPredicted RBP22.54■■□□□ 1.2
PGAP1-208ENST00000470179 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
PGAP1-208ENST00000470179 IL27Q8NEV9 243 aa22.53■■□□□ 1.2
PGAP1-208ENST00000470179 PTPRMP28827 1452 aa22.53■■□□□ 1.2
PGAP1-208ENST00000470179 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
PGAP1-208ENST00000470179 IDI1Q13907 227 aa22.52■■□□□ 1.2
PGAP1-208ENST00000470179 STAC3Q96MF2 364 aa22.5■■□□□ 1.19
PGAP1-208ENST00000470179 EXOC6Q8TAG9 804 aa22.5■■□□□ 1.19
PGAP1-208ENST00000470179 CEBPAP49715 358 aaPredicted RBP22.49■■□□□ 1.19
PGAP1-208ENST00000470179 NUDCQ9Y266 331 aa22.49■■□□□ 1.19
PGAP1-208ENST00000470179 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
PGAP1-208ENST00000470179 SETD1BQ9UPS6 1966 aaKnown RBP22.49■■□□□ 1.19
PGAP1-208ENST00000470179 PLIN1O60240 522 aa22.48■■□□□ 1.19
PGAP1-208ENST00000470179 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
PGAP1-208ENST00000470179 ANP32AP39687 249 aaKnown RBP22.47■■□□□ 1.19
PGAP1-208ENST00000470179 ZBTB47Q9UFB7 747 aaPredicted RBP22.47■■□□□ 1.19
PGAP1-208ENST00000470179 MYO3AQ8NEV4 1616 aa22.46■■□□□ 1.19
PGAP1-208ENST00000470179 RPGRIP1LQ68CZ1 1315 aa22.46■■□□□ 1.19
PGAP1-208ENST00000470179 UHRF1BP1Q6BDS2 1440 aa22.46■■□□□ 1.19
PGAP1-208ENST00000470179 IPO9Q96P70 1041 aaKnown RBP22.46■■□□□ 1.19
PGAP1-208ENST00000470179 KDM4FA0A1W2PPD8 638 aa22.45■■□□□ 1.18
PGAP1-208ENST00000470179 A2ML1A8K2U0 1454 aa22.45■■□□□ 1.18
PGAP1-208ENST00000470179 UBR1Q8IWV7 1749 aa22.45■■□□□ 1.18
PGAP1-208ENST00000470179 ERICH6BQ5W0A0 696 aa22.44■■□□□ 1.18
PGAP1-208ENST00000470179 ZNF142P52746 1687 aaPredicted RBP22.44■■□□□ 1.18
PGAP1-208ENST00000470179 MYO5BQ9ULV0 1848 aa22.44■■□□□ 1.18
PGAP1-208ENST00000470179 PPLO60437 1756 aa22.44■■□□□ 1.18
PGAP1-208ENST00000470179 MYOM2P54296 1465 aa22.43■■□□□ 1.18
PGAP1-208ENST00000470179 CDCA7LQ96GN5 454 aa22.42■■□□□ 1.18
PGAP1-208ENST00000470179 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
PGAP1-208ENST00000470179 ZFYVE9O95405 1425 aa22.41■■□□□ 1.18
PGAP1-208ENST00000470179 PNISRQ8TF01 805 aaKnown RBP22.4■■□□□ 1.18
PGAP1-208ENST00000470179 NRXN1Q9ULB1 1477 aa22.4■■□□□ 1.18
PGAP1-208ENST00000470179 SLC4A3P48751 1232 aa22.4■■□□□ 1.18
PGAP1-208ENST00000470179 CEP170BQ9Y4F5 1589 aaPredicted RBP22.39■■□□□ 1.17
PGAP1-208ENST00000470179 USP47Q96K76 1375 aa22.39■■□□□ 1.17
PGAP1-208ENST00000470179 RTL5Q5HYW3 569 aaPredicted RBP22.39■■□□□ 1.17
PGAP1-208ENST00000470179 RGL3Q3MIN7 710 aa22.38■■□□□ 1.17
PGAP1-208ENST00000470179 DCAF11Q8TEB1 546 aa22.37■■□□□ 1.17
PGAP1-208ENST00000470179 PRAG1Q86YV5 1406 aa22.36■■□□□ 1.17
PGAP1-208ENST00000470179 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
PGAP1-208ENST00000470179 SMG6Q86US8 1419 aaKnown RBP22.36■■□□□ 1.17
PGAP1-208ENST00000470179 SLIT1O75093 1534 aa22.35■■□□□ 1.17
PGAP1-208ENST00000470179 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.35■■□□□ 1.17
PGAP1-208ENST00000470179 ARHGAP23Q9P227 1491 aa22.35■■□□□ 1.17
PGAP1-208ENST00000470179 CHGAP10645 457 aaKnown RBP22.34■■□□□ 1.17
PGAP1-208ENST00000470179 CARD11Q9BXL7 1154 aa22.33■■□□□ 1.17
PGAP1-208ENST00000470179 KIAA1210Q9ULL0 1709 aa22.33■■□□□ 1.17
PGAP1-208ENST00000470179 TMEM2Q9UHN6 1383 aa22.32■■□□□ 1.16
PGAP1-208ENST00000470179 STAG3Q9UJ98 1225 aa22.32■■□□□ 1.16
PGAP1-208ENST00000470179 RIMS2Q9UQ26 1411 aa22.31■■□□□ 1.16
PGAP1-208ENST00000470179 NEFMP07197 916 aa22.31■■□□□ 1.16
PGAP1-208ENST00000470179 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
PGAP1-208ENST00000470179 TRPM1Q7Z4N2 1603 aa22.3■■□□□ 1.16
PGAP1-208ENST00000470179 RALGAPBQ86X10 1494 aa22.3■■□□□ 1.16
PGAP1-208ENST00000470179 THEMISQ8N1K5 641 aaPredicted RBP22.29■■□□□ 1.16
PGAP1-208ENST00000470179 PIK3C2GO75747 1445 aa22.29■■□□□ 1.16
PGAP1-208ENST00000470179 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.28■■□□□ 1.16
PGAP1-208ENST00000470179 CC2D1BQ5T0F9 858 aaKnown RBP22.28■■□□□ 1.16
PGAP1-208ENST00000470179 PDE4AP27815 886 aa22.27■■□□□ 1.16
PGAP1-208ENST00000470179 HDGFP51858 240 aaKnown RBP22.27■■□□□ 1.16
PGAP1-208ENST00000470179 RRP1P56182 461 aaKnown RBP22.27■■□□□ 1.16
PGAP1-208ENST00000470179 ADGRF5Q8IZF2 1346 aa22.26■■□□□ 1.15
PGAP1-208ENST00000470179 PLPPR3Q6T4P5 718 aa22.26■■□□□ 1.15
PGAP1-208ENST00000470179 LAMC1P11047 1609 aa22.26■■□□□ 1.15
PGAP1-208ENST00000470179 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
PGAP1-208ENST00000470179 RNF123Q5XPI4 1314 aa22.25■■□□□ 1.15
PGAP1-208ENST00000470179 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
PGAP1-208ENST00000470179 C20orf194Q5TEA3 1177 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms