RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
SQSTM1-205ENST00000464493 CCDC144AA2RUR9 1427 aa21.36■■□□□ 1.01
SQSTM1-205ENST00000464493 ZFYVE9O95405 1425 aa21.36■■□□□ 1.01
SQSTM1-205ENST00000464493 IQGAP1P46940 1657 aa21.35■■□□□ 1.01
SQSTM1-205ENST00000464493 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
SQSTM1-205ENST00000464493 NUTM2DQ5VT03 806 aaPredicted RBP21.32■■□□□ 1
SQSTM1-205ENST00000464493 ANKRD30BQ9BXX2 1392 aa21.31■■□□□ 1
SQSTM1-205ENST00000464493 BCANQ96GW7 911 aa21.3■■□□□ 1
SQSTM1-205ENST00000464493 ZNF335Q9H4Z2 1342 aaPredicted RBP21.29■■□□□ 1
SQSTM1-205ENST00000464493 PLEKHG1Q9ULL1 1385 aa21.28■■□□□ 1
SQSTM1-205ENST00000464493 SENP3Q9H4L4 574 aaPredicted RBP21.27■■□□□ 1
SQSTM1-205ENST00000464493 RPGRIP1LQ68CZ1 1315 aa21.27■□□□□ 0.99
SQSTM1-205ENST00000464493 RGL3Q3MIN7 710 aa21.26■□□□□ 0.99
SQSTM1-205ENST00000464493 SLC26A8Q96RN1 970 aa21.26■□□□□ 0.99
SQSTM1-205ENST00000464493 SPATA31E1Q6ZUB1 1445 aa21.25■□□□□ 0.99
SQSTM1-205ENST00000464493 NEXMIFQ5QGS0 1516 aa21.24■□□□□ 0.99
SQSTM1-205ENST00000464493 PCGF6Q9BYE7 350 aa21.24■□□□□ 0.99
SQSTM1-205ENST00000464493 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
SQSTM1-205ENST00000464493 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
SQSTM1-205ENST00000464493 CERKQ8TCT0 537 aa21.23■□□□□ 0.99
SQSTM1-205ENST00000464493 TBX22Q9Y458 520 aa21.21■□□□□ 0.99
SQSTM1-205ENST00000464493 PPLO60437 1756 aa21.18■□□□□ 0.98
SQSTM1-205ENST00000464493 ADAMTS13Q76LX8 1427 aa21.18■□□□□ 0.98
SQSTM1-205ENST00000464493 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
SQSTM1-205ENST00000464493 CPS1P31327 1500 aa21.16■□□□□ 0.98
SQSTM1-205ENST00000464493 KCNA6P17658 529 aa21.16■□□□□ 0.98
SQSTM1-205ENST00000464493 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
SQSTM1-205ENST00000464493 STRCP1A6NGW2 1772 aa21.15■□□□□ 0.98
SQSTM1-205ENST00000464493 DIP2AQ14689 1571 aa21.14■□□□□ 0.98
SQSTM1-205ENST00000464493 NRXN3Q9Y4C0 1643 aa21.14■□□□□ 0.97
SQSTM1-205ENST00000464493 IFT172Q9UG01 1749 aa21.13■□□□□ 0.97
SQSTM1-205ENST00000464493 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
SQSTM1-205ENST00000464493 PIK3R4Q99570 1358 aa21.11■□□□□ 0.97
SQSTM1-205ENST00000464493 CHD2O14647 1828 aaKnown RBP21.11■□□□□ 0.97
SQSTM1-205ENST00000464493 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
SQSTM1-205ENST00000464493 DCAF11Q8TEB1 546 aa21.08■□□□□ 0.97
SQSTM1-205ENST00000464493 SIN3AQ96ST3 1273 aa21.08■□□□□ 0.97
SQSTM1-205ENST00000464493 LRRC7Q96NW7 1537 aa21.08■□□□□ 0.96
SQSTM1-205ENST00000464493 AMOTL2Q9Y2J4 779 aa21.07■□□□□ 0.96
SQSTM1-205ENST00000464493 KDM2AQ9Y2K7 1162 aa21.07■□□□□ 0.96
SQSTM1-205ENST00000464493 METP08581 1390 aa21.07■□□□□ 0.96
SQSTM1-205ENST00000464493 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
SQSTM1-205ENST00000464493 NWD1Q149M9 1564 aa21.06■□□□□ 0.96
SQSTM1-205ENST00000464493 PROSER2Q86WR7 435 aaPredicted RBP21.06■□□□□ 0.96
SQSTM1-205ENST00000464493 STAC3Q96MF2 364 aa21.06■□□□□ 0.96
SQSTM1-205ENST00000464493 MYOM2P54296 1465 aa21.06■□□□□ 0.96
SQSTM1-205ENST00000464493 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
SQSTM1-205ENST00000464493 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
SQSTM1-205ENST00000464493 FBXO41Q8TF61 875 aa21.04■□□□□ 0.96
SQSTM1-205ENST00000464493 NKTRP30414 1462 aaKnown RBP21.04■□□□□ 0.96
SQSTM1-205ENST00000464493 PTPRUQ92729 1446 aa21.04■□□□□ 0.96
SQSTM1-205ENST00000464493 NRXN1Q9ULB1 1477 aa21.03■□□□□ 0.96
SQSTM1-205ENST00000464493 SETD1AO15047 1707 aaKnown RBP21.03■□□□□ 0.96
SQSTM1-205ENST00000464493 TMEM94Q12767 1356 aa21.01■□□□□ 0.95
SQSTM1-205ENST00000464493 RBM33Q96EV2 1170 aaKnown RBP21.01■□□□□ 0.95
SQSTM1-205ENST00000464493 C14orf93Q9H972 538 aaKnown RBP21.01■□□□□ 0.95
SQSTM1-205ENST00000464493 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
SQSTM1-205ENST00000464493 UBAP1LF5GYI3 381 aa20.98■□□□□ 0.95
SQSTM1-205ENST00000464493 CFAP70Q5T0N1 1121 aa20.98■□□□□ 0.95
SQSTM1-205ENST00000464493 XRN1Q8IZH2 1706 aaKnown RBP20.98■□□□□ 0.95
SQSTM1-205ENST00000464493 TMEM132EQ6IEE7 984 aa20.97■□□□□ 0.95
SQSTM1-205ENST00000464493 L3MBTL2Q969R5 705 aa20.97■□□□□ 0.95
SQSTM1-205ENST00000464493 ILDR1Q86SU0 546 aaPredicted RBP20.96■□□□□ 0.95
SQSTM1-205ENST00000464493 TOM1O60784 492 aa20.95■□□□□ 0.94
SQSTM1-205ENST00000464493 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
SQSTM1-205ENST00000464493 LAMC1P11047 1609 aa20.93■□□□□ 0.94
SQSTM1-205ENST00000464493 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
SQSTM1-205ENST00000464493 STK26Q9P289 416 aa20.93■□□□□ 0.94
SQSTM1-205ENST00000464493 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
SQSTM1-205ENST00000464493 MSH6P52701 1360 aa20.91■□□□□ 0.94
SQSTM1-205ENST00000464493 ASXL1Q8IXJ9 1541 aa20.91■□□□□ 0.94
SQSTM1-205ENST00000464493 PTCH1Q13635 1447 aa20.9■□□□□ 0.94
SQSTM1-205ENST00000464493 YTHDC2Q9H6S0 1430 aaKnown RBP20.9■□□□□ 0.94
SQSTM1-205ENST00000464493 ABCC11Q96J66 1382 aa20.9■□□□□ 0.94
SQSTM1-205ENST00000464493 ROBO2Q9HCK4 1378 aa20.9■□□□□ 0.94
SQSTM1-205ENST00000464493 PRAG1Q86YV5 1406 aa20.89■□□□□ 0.94
SQSTM1-205ENST00000464493 C19orf44Q9H6X5 657 aa20.89■□□□□ 0.93
SQSTM1-205ENST00000464493 TONSLQ96HA7 1378 aa20.88■□□□□ 0.93
SQSTM1-205ENST00000464493 CLSPNQ9HAW4 1339 aa20.88■□□□□ 0.93
SQSTM1-205ENST00000464493 PIP4K2BP78356 416 aa20.87■□□□□ 0.93
SQSTM1-205ENST00000464493 TECPR2O15040 1411 aa20.87■□□□□ 0.93
SQSTM1-205ENST00000464493 CCER1Q8TC90 406 aaPredicted RBP20.86■□□□□ 0.93
SQSTM1-205ENST00000464493 ADGRB1O14514 1584 aa20.85■□□□□ 0.93
SQSTM1-205ENST00000464493 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
SQSTM1-205ENST00000464493 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
SQSTM1-205ENST00000464493 KNDC1Q76NI1 1749 aa20.84■□□□□ 0.93
SQSTM1-205ENST00000464493 ATF3P18847 181 aa20.84■□□□□ 0.93
SQSTM1-205ENST00000464493 WAPLQ7Z5K2 1190 aa20.84■□□□□ 0.93
SQSTM1-205ENST00000464493 CADPS2Q86UW7 1296 aa20.84■□□□□ 0.93
SQSTM1-205ENST00000464493 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.84■□□□□ 0.93
SQSTM1-205ENST00000464493 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
SQSTM1-205ENST00000464493 NBPF1Q3BBV0 1214 aa20.82■□□□□ 0.92
SQSTM1-205ENST00000464493 TRAK1Q9UPV9 953 aa20.82■□□□□ 0.92
SQSTM1-205ENST00000464493 ADGRL3Q9HAR2 1447 aa20.81■□□□□ 0.92
SQSTM1-205ENST00000464493 SLAIN2Q9P270 581 aa20.81■□□□□ 0.92
SQSTM1-205ENST00000464493 FAM135BQ49AJ0 1406 aa20.8■□□□□ 0.92
SQSTM1-205ENST00000464493 DCCP43146 1447 aa20.79■□□□□ 0.92
SQSTM1-205ENST00000464493 NALCNQ8IZF0 1738 aa20.79■□□□□ 0.92
SQSTM1-205ENST00000464493 PRAM1Q96QH2 718 aa20.79■□□□□ 0.92
SQSTM1-205ENST00000464493 PLEKHH1Q9ULM0 1364 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms