RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 ANP32CO43423 234 aa16.95■□□□□ 0.3
SEC61A1-203ENST00000464451 CLTCL1P53675 1640 aa16.95■□□□□ 0.3
SEC61A1-203ENST00000464451 TRPM2O94759 1503 aa16.94■□□□□ 0.3
SEC61A1-203ENST00000464451 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
SEC61A1-203ENST00000464451 ADGRB3O60242 1522 aa16.94■□□□□ 0.3
SEC61A1-203ENST00000464451 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
SEC61A1-203ENST00000464451 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
SEC61A1-203ENST00000464451 MYO5BQ9ULV0 1848 aa16.92■□□□□ 0.3
SEC61A1-203ENST00000464451 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
SEC61A1-203ENST00000464451 LTKP29376 864 aa16.92■□□□□ 0.3
SEC61A1-203ENST00000464451 TXNDC2Q86VQ3 553 aa16.92■□□□□ 0.3
SEC61A1-203ENST00000464451 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
SEC61A1-203ENST00000464451 TMEM2Q9UHN6 1383 aa16.91■□□□□ 0.3
SEC61A1-203ENST00000464451 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
SEC61A1-203ENST00000464451 HSPA5P11021 654 aaKnown RBP16.9■□□□□ 0.3
SEC61A1-203ENST00000464451 CCDC144AA2RUR9 1427 aa16.89■□□□□ 0.29
SEC61A1-203ENST00000464451 EID1Q9Y6B2 187 aa16.88■□□□□ 0.29
SEC61A1-203ENST00000464451 KDM5AP29375 1690 aaKnown RBP16.87■□□□□ 0.29
SEC61A1-203ENST00000464451 SLIT1O75093 1534 aa16.87■□□□□ 0.29
SEC61A1-203ENST00000464451 POLR1AO95602 1720 aaPredicted RBP16.87■□□□□ 0.29
SEC61A1-203ENST00000464451 NEURL4Q96JN8 1562 aa16.87■□□□□ 0.29
SEC61A1-203ENST00000464451 RGL3Q3MIN7 710 aa16.87■□□□□ 0.29
SEC61A1-203ENST00000464451 ARHGAP23Q9P227 1491 aa16.87■□□□□ 0.29
SEC61A1-203ENST00000464451 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
SEC61A1-203ENST00000464451 RIMS2Q9UQ26 1411 aa16.86■□□□□ 0.29
SEC61A1-203ENST00000464451 SCAF11Q99590 1463 aaKnown RBP16.86■□□□□ 0.29
SEC61A1-203ENST00000464451 BCANQ96GW7 911 aa16.86■□□□□ 0.29
SEC61A1-203ENST00000464451 NPHP4O75161 1426 aaPredicted RBP16.85■□□□□ 0.29
SEC61A1-203ENST00000464451 KIF1BO60333 1816 aa16.85■□□□□ 0.29
SEC61A1-203ENST00000464451 WASHC2AQ641Q2 1341 aa16.84■□□□□ 0.29
SEC61A1-203ENST00000464451 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
SEC61A1-203ENST00000464451 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
SEC61A1-203ENST00000464451 SLC26A8Q96RN1 970 aa16.82■□□□□ 0.28
SEC61A1-203ENST00000464451 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
SEC61A1-203ENST00000464451 MED14O60244 1454 aa16.81■□□□□ 0.28
SEC61A1-203ENST00000464451 HDGFP51858 240 aaKnown RBP16.8■□□□□ 0.28
SEC61A1-203ENST00000464451 ZNF335Q9H4Z2 1342 aaPredicted RBP16.8■□□□□ 0.28
SEC61A1-203ENST00000464451 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
SEC61A1-203ENST00000464451 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
SEC61A1-203ENST00000464451 NEXMIFQ5QGS0 1516 aa16.78■□□□□ 0.28
SEC61A1-203ENST00000464451 CCDC7Q96M83 1385 aa16.76■□□□□ 0.27
SEC61A1-203ENST00000464451 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
SEC61A1-203ENST00000464451 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
SEC61A1-203ENST00000464451 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
SEC61A1-203ENST00000464451 ADGRF5Q8IZF2 1346 aa16.73■□□□□ 0.27
SEC61A1-203ENST00000464451 VGFO15240 615 aaPredicted RBP16.73■□□□□ 0.27
SEC61A1-203ENST00000464451 KDM2AQ9Y2K7 1162 aa16.73■□□□□ 0.27
SEC61A1-203ENST00000464451 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
SEC61A1-203ENST00000464451 PPLO60437 1756 aa16.72■□□□□ 0.27
SEC61A1-203ENST00000464451 DCAF11Q8TEB1 546 aa16.71■□□□□ 0.27
SEC61A1-203ENST00000464451 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
SEC61A1-203ENST00000464451 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
SEC61A1-203ENST00000464451 NRXN3Q9Y4C0 1643 aa16.68■□□□□ 0.26
SEC61A1-203ENST00000464451 IFT172Q9UG01 1749 aa16.68■□□□□ 0.26
SEC61A1-203ENST00000464451 TBX22Q9Y458 520 aa16.68■□□□□ 0.26
SEC61A1-203ENST00000464451 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
SEC61A1-203ENST00000464451 RBM33Q96EV2 1170 aaKnown RBP16.67■□□□□ 0.26
SEC61A1-203ENST00000464451 STRCP1A6NGW2 1772 aa16.67■□□□□ 0.26
SEC61A1-203ENST00000464451 USP47Q96K76 1375 aa16.67■□□□□ 0.26
SEC61A1-203ENST00000464451 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
SEC61A1-203ENST00000464451 CERKQ8TCT0 537 aa16.66■□□□□ 0.26
SEC61A1-203ENST00000464451 METP08581 1390 aa16.66■□□□□ 0.26
SEC61A1-203ENST00000464451 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
SEC61A1-203ENST00000464451 KCNA6P17658 529 aa16.64■□□□□ 0.25
SEC61A1-203ENST00000464451 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.25
SEC61A1-203ENST00000464451 ALKQ9UM73 1620 aa16.63■□□□□ 0.25
SEC61A1-203ENST00000464451 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
SEC61A1-203ENST00000464451 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
SEC61A1-203ENST00000464451 PTPRUQ92729 1446 aa16.62■□□□□ 0.25
SEC61A1-203ENST00000464451 AMOTL2Q9Y2J4 779 aa16.62■□□□□ 0.25
SEC61A1-203ENST00000464451 DIP2AQ14689 1571 aa16.62■□□□□ 0.25
SEC61A1-203ENST00000464451 MYOM2P54296 1465 aa16.62■□□□□ 0.25
SEC61A1-203ENST00000464451 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
SEC61A1-203ENST00000464451 PROSER2Q86WR7 435 aaPredicted RBP16.61■□□□□ 0.25
SEC61A1-203ENST00000464451 CPS1P31327 1500 aa16.6■□□□□ 0.25
SEC61A1-203ENST00000464451 CHD2O14647 1828 aaKnown RBP16.59■□□□□ 0.25
SEC61A1-203ENST00000464451 CARD11Q9BXL7 1154 aa16.59■□□□□ 0.25
SEC61A1-203ENST00000464451 STK26Q9P289 416 aa16.59■□□□□ 0.25
SEC61A1-203ENST00000464451 LRRC7Q96NW7 1537 aa16.59■□□□□ 0.25
SEC61A1-203ENST00000464451 NRXN1Q9ULB1 1477 aa16.59■□□□□ 0.25
SEC61A1-203ENST00000464451 SETD1AO15047 1707 aaKnown RBP16.59■□□□□ 0.25
SEC61A1-203ENST00000464451 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.24
SEC61A1-203ENST00000464451 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
SEC61A1-203ENST00000464451 PIK3R4Q99570 1358 aa16.57■□□□□ 0.24
SEC61A1-203ENST00000464451 NWD1Q149M9 1564 aa16.57■□□□□ 0.24
SEC61A1-203ENST00000464451 ROCK2O75116 1388 aaKnown RBP16.56■□□□□ 0.24
SEC61A1-203ENST00000464451 TMEM94Q12767 1356 aa16.56■□□□□ 0.24
SEC61A1-203ENST00000464451 NEFLP07196 543 aa16.56■□□□□ 0.24
SEC61A1-203ENST00000464451 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
SEC61A1-203ENST00000464451 FKBP8Q14318 412 aa16.54■□□□□ 0.24
SEC61A1-203ENST00000464451 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
SEC61A1-203ENST00000464451 NKTRP30414 1462 aaKnown RBP16.53■□□□□ 0.24
SEC61A1-203ENST00000464451 STAC3Q96MF2 364 aa16.53■□□□□ 0.24
SEC61A1-203ENST00000464451 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
SEC61A1-203ENST00000464451 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
SEC61A1-203ENST00000464451 PRAG1Q86YV5 1406 aa16.52■□□□□ 0.24
SEC61A1-203ENST00000464451 CCDC184Q52MB2 194 aa16.52■□□□□ 0.24
SEC61A1-203ENST00000464451 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
SEC61A1-203ENST00000464451 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.23
SEC61A1-203ENST00000464451 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 871.9 ms