RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NPHP4O75161 1426 aaPredicted RBP14.14□□□□□ -0.15
PTPRD-207ENST00000463477 NEURL4Q96JN8 1562 aa14.14□□□□□ -0.15
PTPRD-207ENST00000463477 SCAF11Q99590 1463 aaKnown RBP14.13□□□□□ -0.15
PTPRD-207ENST00000463477 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
PTPRD-207ENST00000463477 ADGRB3O60242 1522 aa14.12□□□□□ -0.15
PTPRD-207ENST00000463477 ZNF335Q9H4Z2 1342 aaPredicted RBP14.11□□□□□ -0.15
PTPRD-207ENST00000463477 POLR1AO95602 1720 aaPredicted RBP14.11□□□□□ -0.15
PTPRD-207ENST00000463477 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPRD-207ENST00000463477 TMEM131LA2VDJ0 1609 aa14.1□□□□□ -0.15
PTPRD-207ENST00000463477 LTBP4Q8N2S1 1624 aa14.1□□□□□ -0.15
PTPRD-207ENST00000463477 ZFYVE9O95405 1425 aa14.09□□□□□ -0.15
PTPRD-207ENST00000463477 FOXD1Q16676 465 aa14.09□□□□□ -0.15
PTPRD-207ENST00000463477 SPHKAPQ2M3C7 1700 aa14.08□□□□□ -0.16
PTPRD-207ENST00000463477 PPP1R15AO75807 674 aaPredicted RBP14.08□□□□□ -0.16
PTPRD-207ENST00000463477 SIN3AQ96ST3 1273 aa14.08□□□□□ -0.16
PTPRD-207ENST00000463477 RIMS2Q9UQ26 1411 aa14.08□□□□□ -0.16
PTPRD-207ENST00000463477 TRPM2O94759 1503 aa14.08□□□□□ -0.16
PTPRD-207ENST00000463477 FBXO41Q8TF61 875 aa14.07□□□□□ -0.16
PTPRD-207ENST00000463477 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
PTPRD-207ENST00000463477 PLEKHG1Q9ULL1 1385 aa14.05□□□□□ -0.16
PTPRD-207ENST00000463477 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
PTPRD-207ENST00000463477 ILDR1Q86SU0 546 aaPredicted RBP14.04□□□□□ -0.16
PTPRD-207ENST00000463477 SLC26A8Q96RN1 970 aa14.04□□□□□ -0.16
PTPRD-207ENST00000463477 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
PTPRD-207ENST00000463477 BCANQ96GW7 911 aa14.04□□□□□ -0.16
PTPRD-207ENST00000463477 TBX22Q9Y458 520 aa14.04□□□□□ -0.16
PTPRD-207ENST00000463477 MYO5BQ9ULV0 1848 aa14.03□□□□□ -0.16
PTPRD-207ENST00000463477 CLTCL1P53675 1640 aa14.03□□□□□ -0.16
PTPRD-207ENST00000463477 NUTM2DQ5VT03 806 aaPredicted RBP14.03□□□□□ -0.16
PTPRD-207ENST00000463477 IQSEC2Q5JU85 1478 aa14.03□□□□□ -0.16
PTPRD-207ENST00000463477 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
PTPRD-207ENST00000463477 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.17
PTPRD-207ENST00000463477 CPS1P31327 1500 aa14.01□□□□□ -0.17
PTPRD-207ENST00000463477 KCNA6P17658 529 aa14.01□□□□□ -0.17
PTPRD-207ENST00000463477 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
PTPRD-207ENST00000463477 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
PTPRD-207ENST00000463477 ANKRD30BQ9BXX2 1392 aa13.98□□□□□ -0.17
PTPRD-207ENST00000463477 ADAMTS13Q76LX8 1427 aa13.98□□□□□ -0.17
PTPRD-207ENST00000463477 KIF1BO60333 1816 aa13.98□□□□□ -0.17
PTPRD-207ENST00000463477 SPATA31E1Q6ZUB1 1445 aa13.96□□□□□ -0.17
PTPRD-207ENST00000463477 PIK3R4Q99570 1358 aa13.96□□□□□ -0.17
PTPRD-207ENST00000463477 RGL3Q3MIN7 710 aa13.96□□□□□ -0.17
PTPRD-207ENST00000463477 NEXMIFQ5QGS0 1516 aa13.96□□□□□ -0.18
PTPRD-207ENST00000463477 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
PTPRD-207ENST00000463477 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
PTPRD-207ENST00000463477 STRCP1A6NGW2 1772 aa13.94□□□□□ -0.18
PTPRD-207ENST00000463477 TOM1O60784 492 aa13.93□□□□□ -0.18
PTPRD-207ENST00000463477 PROSER2Q86WR7 435 aaPredicted RBP13.93□□□□□ -0.18
PTPRD-207ENST00000463477 SETBP1Q9Y6X0 1596 aa13.93□□□□□ -0.18
PTPRD-207ENST00000463477 UBAP1LF5GYI3 381 aa13.92□□□□□ -0.18
PTPRD-207ENST00000463477 DIP2AQ14689 1571 aa13.92□□□□□ -0.18
PTPRD-207ENST00000463477 AMOTL2Q9Y2J4 779 aa13.91□□□□□ -0.18
PTPRD-207ENST00000463477 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
PTPRD-207ENST00000463477 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
PTPRD-207ENST00000463477 METP08581 1390 aa13.9□□□□□ -0.18
PTPRD-207ENST00000463477 TMEM94Q12767 1356 aa13.9□□□□□ -0.18
PTPRD-207ENST00000463477 NKTRP30414 1462 aaKnown RBP13.9□□□□□ -0.18
PTPRD-207ENST00000463477 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
PTPRD-207ENST00000463477 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
PTPRD-207ENST00000463477 NWD1Q149M9 1564 aa13.89□□□□□ -0.19
PTPRD-207ENST00000463477 NRXN3Q9Y4C0 1643 aa13.89□□□□□ -0.19
PTPRD-207ENST00000463477 PTPRUQ92729 1446 aa13.88□□□□□ -0.19
PTPRD-207ENST00000463477 NCOA3Q9Y6Q9 1424 aa13.88□□□□□ -0.19
PTPRD-207ENST00000463477 PPLO60437 1756 aa13.87□□□□□ -0.19
PTPRD-207ENST00000463477 RBM33Q96EV2 1170 aaKnown RBP13.87□□□□□ -0.19
PTPRD-207ENST00000463477 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
PTPRD-207ENST00000463477 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
PTPRD-207ENST00000463477 DDX10Q13206 875 aaKnown RBP13.85□□□□□ -0.19
PTPRD-207ENST00000463477 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
PTPRD-207ENST00000463477 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
PTPRD-207ENST00000463477 PIP4K2BP78356 416 aa13.84□□□□□ -0.19
PTPRD-207ENST00000463477 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
PTPRD-207ENST00000463477 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
PTPRD-207ENST00000463477 MSH6P52701 1360 aa13.83□□□□□ -0.2
PTPRD-207ENST00000463477 XIRP1Q702N8 1843 aaKnown RBP13.83□□□□□ -0.2
PTPRD-207ENST00000463477 NRXN1Q9ULB1 1477 aa13.82□□□□□ -0.2
PTPRD-207ENST00000463477 IFT172Q9UG01 1749 aa13.82□□□□□ -0.2
PTPRD-207ENST00000463477 MYOM2P54296 1465 aa13.82□□□□□ -0.2
PTPRD-207ENST00000463477 KDM2AQ9Y2K7 1162 aa13.82□□□□□ -0.2
PTPRD-207ENST00000463477 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
PTPRD-207ENST00000463477 CFAP70Q5T0N1 1121 aa13.8□□□□□ -0.2
PTPRD-207ENST00000463477 PRAG1Q86YV5 1406 aa13.8□□□□□ -0.2
PTPRD-207ENST00000463477 XRN1Q8IZH2 1706 aaKnown RBP13.8□□□□□ -0.2
PTPRD-207ENST00000463477 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
PTPRD-207ENST00000463477 CADPS2Q86UW7 1296 aa13.79□□□□□ -0.2
PTPRD-207ENST00000463477 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
PTPRD-207ENST00000463477 ABCC11Q96J66 1382 aa13.79□□□□□ -0.2
PTPRD-207ENST00000463477 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
PTPRD-207ENST00000463477 ANP32CO43423 234 aa13.79□□□□□ -0.2
PTPRD-207ENST00000463477 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
PTPRD-207ENST00000463477 FAM135BQ49AJ0 1406 aa13.78□□□□□ -0.2
PTPRD-207ENST00000463477 PTCH1Q13635 1447 aa13.78□□□□□ -0.2
PTPRD-207ENST00000463477 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
PTPRD-207ENST00000463477 ATF3P18847 181 aa13.78□□□□□ -0.2
PTPRD-207ENST00000463477 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
PTPRD-207ENST00000463477 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.2
PTPRD-207ENST00000463477 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPRD-207ENST00000463477 STK26Q9P289 416 aa13.76□□□□□ -0.21
PTPRD-207ENST00000463477 TECPR2O15040 1411 aa13.76□□□□□ -0.21
PTPRD-207ENST00000463477 HSPA1LP34931 641 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms