RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 WNT2BQ93097 391 aa9.73□□□□□ -0.85
VPS36-202ENST00000462289 ARHGEF11O15085 1522 aa9.72□□□□□ -0.85
VPS36-202ENST00000462289 RIMBP3CA6NJZ7 1639 aa9.72□□□□□ -0.85
VPS36-202ENST00000462289 RIMBP3BA6NNM3 1639 aa9.72□□□□□ -0.85
VPS36-202ENST00000462289 RIMBP3Q9UFD9 1639 aa9.72□□□□□ -0.85
VPS36-202ENST00000462289 EN1Q05925 392 aaPredicted RBP9.72□□□□□ -0.85
VPS36-202ENST00000462289 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
VPS36-202ENST00000462289 RAPGEF2Q9Y4G8 1499 aa9.72□□□□□ -0.85
VPS36-202ENST00000462289 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
VPS36-202ENST00000462289 KIF21BO75037 1637 aa9.71□□□□□ -0.85
VPS36-202ENST00000462289 GOLGA8CPA6NN73 597 aa9.71□□□□□ -0.86
VPS36-202ENST00000462289 LAPTM4BQ86VI4 370 aa9.71□□□□□ -0.86
VPS36-202ENST00000462289 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
VPS36-202ENST00000462289 PTPN5P54829 565 aa9.7□□□□□ -0.86
VPS36-202ENST00000462289 NBR1Q14596 966 aa9.7□□□□□ -0.86
VPS36-202ENST00000462289 CTTNBP2Q8WZ74 1663 aa9.7□□□□□ -0.86
VPS36-202ENST00000462289 TRIM6-TRIM34B2RNG4 842 aa9.69□□□□□ -0.86
VPS36-202ENST00000462289 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
VPS36-202ENST00000462289 KIAA1468Q9P260 1216 aa9.69□□□□□ -0.86
VPS36-202ENST00000462289 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
VPS36-202ENST00000462289 IQGAP2Q13576 1575 aa9.67□□□□□ -0.86
VPS36-202ENST00000462289 UGGT2Q9NYU1 1516 aa9.66□□□□□ -0.86
VPS36-202ENST00000462289 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
VPS36-202ENST00000462289 ERCC6L2Q5T890 1561 aa9.66□□□□□ -0.86
VPS36-202ENST00000462289 ARAP1Q96P48 1450 aa9.66□□□□□ -0.86
VPS36-202ENST00000462289 MAP3K7O43318 606 aa9.65□□□□□ -0.86
VPS36-202ENST00000462289 ANKK1Q8NFD2 765 aa9.65□□□□□ -0.86
VPS36-202ENST00000462289 SOWAHBA6NEL2 793 aa9.64□□□□□ -0.87
VPS36-202ENST00000462289 PRIM1P49642 420 aaKnown RBP9.64□□□□□ -0.87
VPS36-202ENST00000462289 ZFRQ96KR1 1074 aaKnown RBP9.64□□□□□ -0.87
VPS36-202ENST00000462289 DISP1Q96F81 1524 aa9.62□□□□□ -0.87
VPS36-202ENST00000462289 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
VPS36-202ENST00000462289 TSKSQ9UJT2 592 aa9.62□□□□□ -0.87
VPS36-202ENST00000462289 OSBPP22059 807 aa9.61□□□□□ -0.87
VPS36-202ENST00000462289 CERKQ8TCT0 537 aa9.61□□□□□ -0.87
VPS36-202ENST00000462289 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
VPS36-202ENST00000462289 SAMD9Q5K651 1589 aa9.6□□□□□ -0.87
VPS36-202ENST00000462289 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
VPS36-202ENST00000462289 BCAMP50895 628 aa9.6□□□□□ -0.87
VPS36-202ENST00000462289 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
VPS36-202ENST00000462289 PRG4Q92954 1404 aaPredicted RBP9.59□□□□□ -0.87
VPS36-202ENST00000462289 NYAP1Q6ZVC0 841 aa9.59□□□□□ -0.87
VPS36-202ENST00000462289 KIAA0556O60303 1618 aa9.59□□□□□ -0.87
VPS36-202ENST00000462289 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
VPS36-202ENST00000462289 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
VPS36-202ENST00000462289 PRSS12P56730 875 aa9.57□□□□□ -0.88
VPS36-202ENST00000462289 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
VPS36-202ENST00000462289 GOLGA3Q08378 1498 aa9.56□□□□□ -0.88
VPS36-202ENST00000462289 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
VPS36-202ENST00000462289 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
VPS36-202ENST00000462289 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
VPS36-202ENST00000462289 CDHR5Q9HBB8 845 aa9.55□□□□□ -0.88
VPS36-202ENST00000462289 WBP1LQ9NX94 342 aa9.54□□□□□ -0.88
VPS36-202ENST00000462289 ADCY10Q96PN6 1610 aa9.53□□□□□ -0.88
VPS36-202ENST00000462289 EFCAB5A4FU69 1503 aa9.53□□□□□ -0.88
VPS36-202ENST00000462289 A0A0G2JS52 829 aa9.53□□□□□ -0.88
VPS36-202ENST00000462289 RGS20O76081 388 aa9.53□□□□□ -0.88
VPS36-202ENST00000462289 KCNV2Q8TDN2 545 aa9.53□□□□□ -0.88
VPS36-202ENST00000462289 LRCH3Q96II8 777 aa9.53□□□□□ -0.88
VPS36-202ENST00000462289 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
VPS36-202ENST00000462289 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
VPS36-202ENST00000462289 UHRF1BP1LA0JNW5 1464 aa9.53□□□□□ -0.88
VPS36-202ENST00000462289 CARMIL2Q6F5E8 1435 aa9.52□□□□□ -0.89
VPS36-202ENST00000462289 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
VPS36-202ENST00000462289 TNIKQ9UKE5 1360 aa9.51□□□□□ -0.89
VPS36-202ENST00000462289 ABCA8O94911 1581 aa9.51□□□□□ -0.89
VPS36-202ENST00000462289 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
VPS36-202ENST00000462289 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
VPS36-202ENST00000462289 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
VPS36-202ENST00000462289 TATDN2Q93075 761 aa9.5□□□□□ -0.89
VPS36-202ENST00000462289 SMAPO00193 183 aa9.49□□□□□ -0.89
VPS36-202ENST00000462289 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
VPS36-202ENST00000462289 ABCC2Q92887 1545 aa9.49□□□□□ -0.89
VPS36-202ENST00000462289 MAPKBP1O60336 1514 aa9.48□□□□□ -0.89
VPS36-202ENST00000462289 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
VPS36-202ENST00000462289 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
VPS36-202ENST00000462289 SAMD7Q7Z3H4 446 aa9.47□□□□□ -0.89
VPS36-202ENST00000462289 PNMA3Q9UL41 463 aa9.47□□□□□ -0.89
VPS36-202ENST00000462289 PTPRGP23470 1445 aa9.47□□□□□ -0.89
VPS36-202ENST00000462289 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
VPS36-202ENST00000462289 CYB5RLQ6IPT4 315 aa9.46□□□□□ -0.9
VPS36-202ENST00000462289 UACAQ9BZF9 1416 aa9.46□□□□□ -0.9
VPS36-202ENST00000462289 PADI6Q6TGC4 694 aa9.45□□□□□ -0.9
VPS36-202ENST00000462289 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
VPS36-202ENST00000462289 P3H3Q8IVL6 736 aa9.45□□□□□ -0.9
VPS36-202ENST00000462289 FAM9AQ8IZU1 332 aaPredicted RBP9.45□□□□□ -0.9
VPS36-202ENST00000462289 PPP4CP60510 307 aa9.44□□□□□ -0.9
VPS36-202ENST00000462289 KIF13AQ9H1H9 1805 aa9.43□□□□□ -0.9
VPS36-202ENST00000462289 PLB1Q6P1J6 1458 aa9.43□□□□□ -0.9
VPS36-202ENST00000462289 KCNC4Q03721 635 aa9.43□□□□□ -0.9
VPS36-202ENST00000462289 ZCCHC11Q5TAX3 1644 aaKnown RBP9.42□□□□□ -0.9
VPS36-202ENST00000462289 RAPGEF6Q8TEU7 1601 aa9.42□□□□□ -0.9
VPS36-202ENST00000462289 PLCB2Q00722 1185 aa9.42□□□□□ -0.9
VPS36-202ENST00000462289 PTGDRQ13258 359 aa9.41□□□□□ -0.9
VPS36-202ENST00000462289 LRRIQ1Q96JM4 1722 aa9.4□□□□□ -0.9
VPS36-202ENST00000462289 EYA1Q99502 592 aa9.4□□□□□ -0.9
VPS36-202ENST00000462289 DIP2BQ9P265 1576 aa9.4□□□□□ -0.9
VPS36-202ENST00000462289 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.91
VPS36-202ENST00000462289 FHOD3Q2V2M9 1422 aa9.39□□□□□ -0.91
VPS36-202ENST00000462289 GLI2P10070 1586 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms