RNA–Protein interactions for RNA: ENST00000462018.1

GABRE-204, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-204ENST00000462018 C8orf37Q96NL8 207 aa13.33□□□□□ -0.28
GABRE-204ENST00000462018 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
GABRE-204ENST00000462018 TET3O43151 1660 aa13.31□□□□□ -0.28
GABRE-204ENST00000462018 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
GABRE-204ENST00000462018 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
GABRE-204ENST00000462018 PIK3C2BO00750 1634 aa13.28□□□□□ -0.28
GABRE-204ENST00000462018 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
GABRE-204ENST00000462018 SLC26A8Q96RN1 970 aa13.28□□□□□ -0.28
GABRE-204ENST00000462018 CAMSAP2Q08AD1 1489 aa13.28□□□□□ -0.28
GABRE-204ENST00000462018 CEP152O94986 1710 aa13.27□□□□□ -0.28
GABRE-204ENST00000462018 PSDA5PKW4 1024 aaPredicted RBP13.27□□□□□ -0.29
GABRE-204ENST00000462018 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.29
GABRE-204ENST00000462018 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
GABRE-204ENST00000462018 RTEL1-TNFRSF6BF6WH68 1400 aa13.27□□□□□ -0.29
GABRE-204ENST00000462018 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.27□□□□□ -0.29
GABRE-204ENST00000462018 CCDC18Q5T9S5 1454 aa13.26□□□□□ -0.29
GABRE-204ENST00000462018 MBD5Q9P267 1494 aa13.26□□□□□ -0.29
GABRE-204ENST00000462018 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
GABRE-204ENST00000462018 HRCP23327 699 aa13.25□□□□□ -0.29
GABRE-204ENST00000462018 EID1Q9Y6B2 187 aa13.25□□□□□ -0.29
GABRE-204ENST00000462018 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
GABRE-204ENST00000462018 SENP3-EIF4A1A0A087X0R7 540 aa13.24□□□□□ -0.29
GABRE-204ENST00000462018 MROH1Q8NDA8 1641 aa13.24□□□□□ -0.29
GABRE-204ENST00000462018 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
GABRE-204ENST00000462018 CHD2O14647 1828 aaKnown RBP13.23□□□□□ -0.29
GABRE-204ENST00000462018 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
GABRE-204ENST00000462018 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
GABRE-204ENST00000462018 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
GABRE-204ENST00000462018 ATRNO75882 1429 aa13.22□□□□□ -0.29
GABRE-204ENST00000462018 PNPLA6Q8IY17 1366 aa13.21□□□□□ -0.29
GABRE-204ENST00000462018 BRINP3Q76B58 766 aa13.21□□□□□ -0.29
GABRE-204ENST00000462018 EFCAB6Q5THR3 1501 aa13.19□□□□□ -0.3
GABRE-204ENST00000462018 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
GABRE-204ENST00000462018 USP21Q9UK80 565 aa13.18□□□□□ -0.3
GABRE-204ENST00000462018 TRPC5Q9UL62 973 aaPredicted RBP13.18□□□□□ -0.3
GABRE-204ENST00000462018 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
GABRE-204ENST00000462018 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
GABRE-204ENST00000462018 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
GABRE-204ENST00000462018 UNC13BO14795 1591 aa13.15□□□□□ -0.3
GABRE-204ENST00000462018 ATXN8OSP0DMR3 200 aa13.15□□□□□ -0.3
GABRE-204ENST00000462018 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
GABRE-204ENST00000462018 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
GABRE-204ENST00000462018 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
GABRE-204ENST00000462018 NCOA3Q9Y6Q9 1424 aa13.14□□□□□ -0.31
GABRE-204ENST00000462018 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
GABRE-204ENST00000462018 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
GABRE-204ENST00000462018 ATF3P18847 181 aa13.12□□□□□ -0.31
GABRE-204ENST00000462018 EIF2AK4Q9P2K8 1649 aaKnown RBP13.12□□□□□ -0.31
GABRE-204ENST00000462018 SPHKAPQ2M3C7 1700 aa13.1□□□□□ -0.31
GABRE-204ENST00000462018 ADGRB3O60242 1522 aa13.1□□□□□ -0.31
GABRE-204ENST00000462018 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
GABRE-204ENST00000462018 LRRC59Q96AG4 307 aaKnown RBP13.1□□□□□ -0.31
GABRE-204ENST00000462018 GLI3P10071 1580 aa13.1□□□□□ -0.31
GABRE-204ENST00000462018 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
GABRE-204ENST00000462018 MST1RQ04912 1400 aa13.09□□□□□ -0.31
GABRE-204ENST00000462018 EEA1Q15075 1411 aa13.09□□□□□ -0.31
GABRE-204ENST00000462018 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
GABRE-204ENST00000462018 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
GABRE-204ENST00000462018 ARHGAP31Q2M1Z3 1444 aa13.08□□□□□ -0.32
GABRE-204ENST00000462018 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
GABRE-204ENST00000462018 R3HDM1Q15032 1099 aaKnown RBP13.08□□□□□ -0.32
GABRE-204ENST00000462018 BCANQ96GW7 911 aa13.08□□□□□ -0.32
GABRE-204ENST00000462018 PTCH1Q13635 1447 aa13.07□□□□□ -0.32
GABRE-204ENST00000462018 ZNF784Q8NCA9 323 aaPredicted RBP13.07□□□□□ -0.32
GABRE-204ENST00000462018 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
GABRE-204ENST00000462018 CEP350Q5VT06 3117 aa13.06□□□□□ -0.32
GABRE-204ENST00000462018 C1QTNF8P60827 252 aa13.06□□□□□ -0.32
GABRE-204ENST00000462018 MARF1Q9Y4F3 1742 aaKnown RBP13.05□□□□□ -0.32
GABRE-204ENST00000462018 MYO5BQ9ULV0 1848 aa13.05□□□□□ -0.32
GABRE-204ENST00000462018 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
GABRE-204ENST00000462018 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
GABRE-204ENST00000462018 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.05□□□□□ -0.32
GABRE-204ENST00000462018 DCCP43146 1447 aa13.05□□□□□ -0.32
GABRE-204ENST00000462018 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
GABRE-204ENST00000462018 RALGAPBQ86X10 1494 aa13.04□□□□□ -0.32
GABRE-204ENST00000462018 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
GABRE-204ENST00000462018 IDI1Q13907 227 aa13.03□□□□□ -0.32
GABRE-204ENST00000462018 ZFYVE9O95405 1425 aa13.03□□□□□ -0.32
GABRE-204ENST00000462018 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
GABRE-204ENST00000462018 LAMC1P11047 1609 aa13.02□□□□□ -0.33
GABRE-204ENST00000462018 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
GABRE-204ENST00000462018 TRPM2O94759 1503 aa13□□□□□ -0.33
GABRE-204ENST00000462018 MYOM2P54296 1465 aa13□□□□□ -0.33
GABRE-204ENST00000462018 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
GABRE-204ENST00000462018 BAG6P46379 1132 aa13□□□□□ -0.33
GABRE-204ENST00000462018 UBTFP17480 764 aaKnown RBP12.99□□□□□ -0.33
GABRE-204ENST00000462018 PTPRUQ92729 1446 aa12.98□□□□□ -0.33
GABRE-204ENST00000462018 MTUS2Q5JR59 1369 aa12.98□□□□□ -0.33
GABRE-204ENST00000462018 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
GABRE-204ENST00000462018 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
GABRE-204ENST00000462018 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
GABRE-204ENST00000462018 EN1Q05925 392 aaPredicted RBP12.97□□□□□ -0.33
GABRE-204ENST00000462018 UTRNP46939 3433 aa12.97□□□□□ -0.33
GABRE-204ENST00000462018 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.33
GABRE-204ENST00000462018 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.33
GABRE-204ENST00000462018 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.33
GABRE-204ENST00000462018 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.33
GABRE-204ENST00000462018 TBX22Q9Y458 520 aa12.96□□□□□ -0.33
GABRE-204ENST00000462018 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
GABRE-204ENST00000462018 NOS1P29475 1434 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms