RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 CPLX2Q6PUV4 134 aaKnown RBP17.18■□□□□ 0.34
SMTN-213ENST00000460658 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
SMTN-213ENST00000460658 NEXNQ0ZGT2 675 aa17.18■□□□□ 0.34
SMTN-213ENST00000460658 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
SMTN-213ENST00000460658 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
SMTN-213ENST00000460658 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
SMTN-213ENST00000460658 INTS3Q68E01 1043 aaKnown RBP17.17■□□□□ 0.34
SMTN-213ENST00000460658 DIAPH3Q9NSV4 1193 aa17.17■□□□□ 0.34
SMTN-213ENST00000460658 CFTRP13569 1480 aa17.17■□□□□ 0.34
SMTN-213ENST00000460658 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
SMTN-213ENST00000460658 TPM3P06753 285 aa17.17■□□□□ 0.34
SMTN-213ENST00000460658 H3BQV1 296 aa17.17■□□□□ 0.34
SMTN-213ENST00000460658 IFFO2Q5TF58 517 aa17.17■□□□□ 0.34
SMTN-213ENST00000460658 PLIN1O60240 522 aa17.16■□□□□ 0.34
SMTN-213ENST00000460658 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
SMTN-213ENST00000460658 FAM184AQ8NB25 1140 aa17.16■□□□□ 0.34
SMTN-213ENST00000460658 GOLGA6L19H0YKK7 550 aa17.16■□□□□ 0.34
SMTN-213ENST00000460658 TEFQ10587 303 aa17.16■□□□□ 0.34
SMTN-213ENST00000460658 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
SMTN-213ENST00000460658 DDX58O95786 925 aaKnown RBP17.15■□□□□ 0.34
SMTN-213ENST00000460658 RIPK4P57078 832 aa17.15■□□□□ 0.34
SMTN-213ENST00000460658 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
SMTN-213ENST00000460658 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.34
SMTN-213ENST00000460658 ARAP1Q96P48 1450 aa17.14■□□□□ 0.33
SMTN-213ENST00000460658 RILPL2Q969X0 211 aa17.14■□□□□ 0.33
SMTN-213ENST00000460658 HSP90AA2PQ14568 343 aaPredicted RBP17.13■□□□□ 0.33
SMTN-213ENST00000460658 TULP1O00294 542 aaPredicted RBP17.13■□□□□ 0.33
SMTN-213ENST00000460658 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
SMTN-213ENST00000460658 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
SMTN-213ENST00000460658 TOP2BQ02880 1626 aa17.12■□□□□ 0.33
SMTN-213ENST00000460658 KIAA1107Q9UPP5 1409 aa17.12■□□□□ 0.33
SMTN-213ENST00000460658 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
SMTN-213ENST00000460658 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
SMTN-213ENST00000460658 TPM1P09493 284 aa17.12■□□□□ 0.33
SMTN-213ENST00000460658 BECN2A8MW95 431 aa17.11■□□□□ 0.33
SMTN-213ENST00000460658 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
SMTN-213ENST00000460658 ERC2O15083 957 aa17.1■□□□□ 0.33
SMTN-213ENST00000460658 SYNE3Q6ZMZ3 975 aa17.1■□□□□ 0.33
SMTN-213ENST00000460658 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
SMTN-213ENST00000460658 RASSF8Q8NHQ8 419 aa17.1■□□□□ 0.33
SMTN-213ENST00000460658 TSR1Q2NL82 804 aaKnown RBP17.1■□□□□ 0.33
SMTN-213ENST00000460658 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
SMTN-213ENST00000460658 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
SMTN-213ENST00000460658 HMGXB3Q12766 1538 aa17.09■□□□□ 0.33
SMTN-213ENST00000460658 MINK1Q8N4C8 1332 aaPredicted RBP17.09■□□□□ 0.33
SMTN-213ENST00000460658 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
SMTN-213ENST00000460658 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
SMTN-213ENST00000460658 CDC45O75419 566 aa17.09■□□□□ 0.33
SMTN-213ENST00000460658 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.08■□□□□ 0.33
SMTN-213ENST00000460658 AKAP17AQ02040 695 aaKnown RBP17.08■□□□□ 0.32
SMTN-213ENST00000460658 GPS2Q13227 327 aa17.08■□□□□ 0.32
SMTN-213ENST00000460658 NUTM2DQ5VT03 806 aaPredicted RBP17.08■□□□□ 0.32
SMTN-213ENST00000460658 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.32
SMTN-213ENST00000460658 TIAM1Q13009 1591 aa17.08■□□□□ 0.32
SMTN-213ENST00000460658 TPM2P07951 284 aa17.08■□□□□ 0.32
SMTN-213ENST00000460658 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
SMTN-213ENST00000460658 MCM2P49736 904 aa17.08■□□□□ 0.32
SMTN-213ENST00000460658 HECW1Q76N89 1606 aa17.08■□□□□ 0.32
SMTN-213ENST00000460658 NOL8Q76FK4 1167 aaKnown RBP17.07■□□□□ 0.32
SMTN-213ENST00000460658 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
SMTN-213ENST00000460658 MRE11P49959 708 aa17.06■□□□□ 0.32
SMTN-213ENST00000460658 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
SMTN-213ENST00000460658 VSIG10Q8N0Z9 540 aa17.05■□□□□ 0.32
SMTN-213ENST00000460658 ELL2O00472 640 aaPredicted RBP17.05■□□□□ 0.32
SMTN-213ENST00000460658 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
SMTN-213ENST00000460658 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
SMTN-213ENST00000460658 CCDC70Q6NSX1 233 aa17.05■□□□□ 0.32
SMTN-213ENST00000460658 TRIM29Q14134 588 aa17.05■□□□□ 0.32
SMTN-213ENST00000460658 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
SMTN-213ENST00000460658 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
SMTN-213ENST00000460658 LETM1O95202 739 aaPredicted RBP17.04■□□□□ 0.32
SMTN-213ENST00000460658 CCDC47Q96A33 483 aaKnown RBP17.04■□□□□ 0.32
SMTN-213ENST00000460658 CLSTN1O94985 981 aa17.03■□□□□ 0.32
SMTN-213ENST00000460658 ANKRD20A12PQ8NF67 263 aa17.03■□□□□ 0.32
SMTN-213ENST00000460658 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
SMTN-213ENST00000460658 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
SMTN-213ENST00000460658 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
SMTN-213ENST00000460658 GNAI3P08754 354 aa17.03■□□□□ 0.32
SMTN-213ENST00000460658 TPD52L1Q16890 204 aaPredicted RBP17.03■□□□□ 0.32
SMTN-213ENST00000460658 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
SMTN-213ENST00000460658 ZNF644Q9H582 1327 aaPredicted RBP17.03■□□□□ 0.32
SMTN-213ENST00000460658 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
SMTN-213ENST00000460658 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
SMTN-213ENST00000460658 MTERF4Q7Z6M4 381 aaKnown RBP17.02■□□□□ 0.32
SMTN-213ENST00000460658 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
SMTN-213ENST00000460658 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
SMTN-213ENST00000460658 MBD3O95983 291 aa17.02■□□□□ 0.31
SMTN-213ENST00000460658 IFT140Q96RY7 1462 aa17.02■□□□□ 0.31
SMTN-213ENST00000460658 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.31
SMTN-213ENST00000460658 OSCARQ8IYS5 282 aa17.02■□□□□ 0.31
SMTN-213ENST00000460658 C9orf84Q5VXU9 1444 aa17.01■□□□□ 0.31
SMTN-213ENST00000460658 ZNF428Q96B54 188 aa17.01■□□□□ 0.31
SMTN-213ENST00000460658 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
SMTN-213ENST00000460658 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
SMTN-213ENST00000460658 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
SMTN-213ENST00000460658 AMOTL1Q8IY63 956 aa17.01■□□□□ 0.31
SMTN-213ENST00000460658 ADAMTS8Q9UP79 889 aa17.01■□□□□ 0.31
SMTN-213ENST00000460658 AQRO60306 1485 aaKnown RBP eCLIP17■□□□□ 0.316e-8■■■■■ 47.6
SMTN-213ENST00000460658 TRDNQ13061 729 aa17■□□□□ 0.31
SMTN-213ENST00000460658 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms