RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
ABCA4-202ENST00000460514 TET3O43151 1660 aa11.15□□□□□ -0.62
ABCA4-202ENST00000460514 MPHOSPH9Q99550 1183 aa11.15□□□□□ -0.62
ABCA4-202ENST00000460514 FER1L4A9Z1Z3 1794 aa11.15□□□□□ -0.62
ABCA4-202ENST00000460514 PZPP20742 1482 aa11.14□□□□□ -0.63
ABCA4-202ENST00000460514 CEP152O94986 1710 aa11.14□□□□□ -0.63
ABCA4-202ENST00000460514 MROH2AA6NES4 1674 aa11.14□□□□□ -0.63
ABCA4-202ENST00000460514 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
ABCA4-202ENST00000460514 ARHGAP31Q2M1Z3 1444 aa11.13□□□□□ -0.63
ABCA4-202ENST00000460514 ADAMTSL3P82987 1691 aa11.13□□□□□ -0.63
ABCA4-202ENST00000460514 CLTCQ00610 1675 aaKnown RBP11.13□□□□□ -0.63
ABCA4-202ENST00000460514 EFCAB6Q5THR3 1501 aa11.13□□□□□ -0.63
ABCA4-202ENST00000460514 CAMSAP1Q5T5Y3 1602 aa11.13□□□□□ -0.63
ABCA4-202ENST00000460514 PKD2Q13563 968 aa11.12□□□□□ -0.63
ABCA4-202ENST00000460514 ZMYM3Q14202 1370 aa11.12□□□□□ -0.63
ABCA4-202ENST00000460514 MADDQ8WXG6 1647 aa11.11□□□□□ -0.63
ABCA4-202ENST00000460514 DHX57Q6P158 1386 aaKnown RBP11.1□□□□□ -0.63
ABCA4-202ENST00000460514 RIMS1Q86UR5 1692 aaKnown RBP11.1□□□□□ -0.63
ABCA4-202ENST00000460514 NPATQ14207 1427 aa11.09□□□□□ -0.63
ABCA4-202ENST00000460514 CLSPNQ9HAW4 1339 aa11.09□□□□□ -0.63
ABCA4-202ENST00000460514 E9PCH4 1651 aa11.08□□□□□ -0.64
ABCA4-202ENST00000460514 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
ABCA4-202ENST00000460514 CCER1Q8TC90 406 aaPredicted RBP11.08□□□□□ -0.64
ABCA4-202ENST00000460514 C3P01024 1663 aa11.06□□□□□ -0.64
ABCA4-202ENST00000460514 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
ABCA4-202ENST00000460514 PTPRMP28827 1452 aa11.06□□□□□ -0.64
ABCA4-202ENST00000460514 ERVK-7P63135 1459 aa11.06□□□□□ -0.64
ABCA4-202ENST00000460514 PREX1Q8TCU6 1659 aa11.05□□□□□ -0.64
ABCA4-202ENST00000460514 PTPRTO14522 1441 aa11.05□□□□□ -0.64
ABCA4-202ENST00000460514 NOS1P29475 1434 aa11.05□□□□□ -0.64
ABCA4-202ENST00000460514 SPATA31D1Q6ZQQ2 1576 aa11.05□□□□□ -0.64
ABCA4-202ENST00000460514 TRPM2O94759 1503 aa11.04□□□□□ -0.64
ABCA4-202ENST00000460514 TNRQ92752 1358 aa11.04□□□□□ -0.64
ABCA4-202ENST00000460514 CFAP65Q6ZU64 1925 aaKnown RBP11.04□□□□□ -0.64
ABCA4-202ENST00000460514 CCDC144AA2RUR9 1427 aa11.04□□□□□ -0.64
ABCA4-202ENST00000460514 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
ABCA4-202ENST00000460514 CDAN1Q8IWY9 1227 aa11.04□□□□□ -0.64
ABCA4-202ENST00000460514 SLC52A1Q9NWF4 448 aa11.04□□□□□ -0.64
ABCA4-202ENST00000460514 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
ABCA4-202ENST00000460514 CEBPAP49715 358 aaPredicted RBP11.03□□□□□ -0.64
ABCA4-202ENST00000460514 FBXO31Q5XUX0 539 aaPredicted RBP11.03□□□□□ -0.64
ABCA4-202ENST00000460514 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
ABCA4-202ENST00000460514 SETD1BQ9UPS6 1966 aaKnown RBP11.02□□□□□ -0.65
ABCA4-202ENST00000460514 NLRP1Q9C000 1473 aa11.01□□□□□ -0.65
ABCA4-202ENST00000460514 POTEJP0CG39 1038 aa11.01□□□□□ -0.65
ABCA4-202ENST00000460514 MKRN4PQ13434 485 aaPredicted RBP11.01□□□□□ -0.65
ABCA4-202ENST00000460514 METRNQ9UJH8 293 aa11.01□□□□□ -0.65
ABCA4-202ENST00000460514 PLA2R1Q13018 1463 aa11□□□□□ -0.65
ABCA4-202ENST00000460514 SYNMO15061 1565 aa11□□□□□ -0.65
ABCA4-202ENST00000460514 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
ABCA4-202ENST00000460514 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
ABCA4-202ENST00000460514 IDI1Q13907 227 aa10.98□□□□□ -0.65
ABCA4-202ENST00000460514 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
ABCA4-202ENST00000460514 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
ABCA4-202ENST00000460514 CLTCL1P53675 1640 aa10.98□□□□□ -0.65
ABCA4-202ENST00000460514 KIF1BO60333 1816 aa10.98□□□□□ -0.65
ABCA4-202ENST00000460514 CHGAP10645 457 aaKnown RBP10.97□□□□□ -0.65
ABCA4-202ENST00000460514 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
ABCA4-202ENST00000460514 MYO3AQ8NEV4 1616 aa10.97□□□□□ -0.65
ABCA4-202ENST00000460514 KDM5AP29375 1690 aaKnown RBP10.96□□□□□ -0.65
ABCA4-202ENST00000460514 NEURL4Q96JN8 1562 aa10.96□□□□□ -0.65
ABCA4-202ENST00000460514 ADGRB3O60242 1522 aa10.96□□□□□ -0.65
ABCA4-202ENST00000460514 A2ML1A8K2U0 1454 aa10.96□□□□□ -0.65
ABCA4-202ENST00000460514 UGGT1Q9NYU2 1555 aa10.95□□□□□ -0.66
ABCA4-202ENST00000460514 TONSLQ96HA7 1378 aa10.95□□□□□ -0.66
ABCA4-202ENST00000460514 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
ABCA4-202ENST00000460514 THEMISQ8N1K5 641 aaPredicted RBP10.95□□□□□ -0.66
ABCA4-202ENST00000460514 SIN3AQ96ST3 1273 aa10.95□□□□□ -0.66
ABCA4-202ENST00000460514 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
ABCA4-202ENST00000460514 CEP170BQ9Y4F5 1589 aaPredicted RBP10.94□□□□□ -0.66
ABCA4-202ENST00000460514 RPGRIP1LQ68CZ1 1315 aa10.94□□□□□ -0.66
ABCA4-202ENST00000460514 ZNF326Q5BKZ1 582 aaKnown RBP10.94□□□□□ -0.66
ABCA4-202ENST00000460514 SLC39A7Q92504 469 aa10.94□□□□□ -0.66
ABCA4-202ENST00000460514 STAC3Q96MF2 364 aa10.94□□□□□ -0.66
ABCA4-202ENST00000460514 ZNF142P52746 1687 aaPredicted RBP10.94□□□□□ -0.66
ABCA4-202ENST00000460514 C7P10643 843 aa10.93□□□□□ -0.66
ABCA4-202ENST00000460514 TMEM131LA2VDJ0 1609 aa10.93□□□□□ -0.66
ABCA4-202ENST00000460514 SPATA31E1Q6ZUB1 1445 aa10.92□□□□□ -0.66
ABCA4-202ENST00000460514 RGL3Q3MIN7 710 aa10.92□□□□□ -0.66
ABCA4-202ENST00000460514 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.92□□□□□ -0.66
ABCA4-202ENST00000460514 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
ABCA4-202ENST00000460514 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
ABCA4-202ENST00000460514 EID1Q9Y6B2 187 aa10.91□□□□□ -0.66
ABCA4-202ENST00000460514 TMEM2Q9UHN6 1383 aa10.9□□□□□ -0.67
ABCA4-202ENST00000460514 VGFO15240 615 aaPredicted RBP10.89□□□□□ -0.67
ABCA4-202ENST00000460514 PPP1R15AO75807 674 aaPredicted RBP10.89□□□□□ -0.67
ABCA4-202ENST00000460514 MYO5BQ9ULV0 1848 aa10.88□□□□□ -0.67
ABCA4-202ENST00000460514 DCAF11Q8TEB1 546 aa10.88□□□□□ -0.67
ABCA4-202ENST00000460514 L3MBTL2Q969R5 705 aa10.88□□□□□ -0.67
ABCA4-202ENST00000460514 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
ABCA4-202ENST00000460514 RIMS2Q9UQ26 1411 aa10.88□□□□□ -0.67
ABCA4-202ENST00000460514 SLIT1O75093 1534 aa10.88□□□□□ -0.67
ABCA4-202ENST00000460514 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
ABCA4-202ENST00000460514 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
ABCA4-202ENST00000460514 ASTLQ6HA08 431 aaPredicted RBP10.87□□□□□ -0.67
ABCA4-202ENST00000460514 ANKLE2Q86XL3 938 aa10.87□□□□□ -0.67
ABCA4-202ENST00000460514 MYOM2P54296 1465 aa10.87□□□□□ -0.67
ABCA4-202ENST00000460514 LMTK3Q96Q04 1460 aa10.87□□□□□ -0.67
ABCA4-202ENST00000460514 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
ABCA4-202ENST00000460514 ZFYVE9O95405 1425 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms