RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 ZNF644Q9H582 1327 aaPredicted RBP9.53□□□□□ -0.88
FN1-213ENST00000456923 PPLO60437 1756 aa9.52□□□□□ -0.89
FN1-213ENST00000456923 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
FN1-213ENST00000456923 KIF1BO60333 1816 aa9.52□□□□□ -0.89
FN1-213ENST00000456923 KNDC1Q76NI1 1749 aa9.52□□□□□ -0.89
FN1-213ENST00000456923 SETBP1Q9Y6X0 1596 aa9.51□□□□□ -0.89
FN1-213ENST00000456923 HNRNPMP52272 730 aaKnown RBP eCLIP9.51□□□□□ -0.89
FN1-213ENST00000456923 LAMC1P11047 1609 aa9.51□□□□□ -0.89
FN1-213ENST00000456923 ZMYM3Q14202 1370 aa9.51□□□□□ -0.89
FN1-213ENST00000456923 UHRF1BP1Q6BDS2 1440 aa9.5□□□□□ -0.89
FN1-213ENST00000456923 AMER1Q5JTC6 1135 aaPredicted RBP9.5□□□□□ -0.89
FN1-213ENST00000456923 KIAA1210Q9ULL0 1709 aa9.5□□□□□ -0.89
FN1-213ENST00000456923 MYO5BQ9ULV0 1848 aa9.5□□□□□ -0.89
FN1-213ENST00000456923 LTBP4Q8N2S1 1624 aa9.49□□□□□ -0.89
FN1-213ENST00000456923 CLSPNQ9HAW4 1339 aa9.49□□□□□ -0.89
FN1-213ENST00000456923 RTL5Q5HYW3 569 aaPredicted RBP9.49□□□□□ -0.89
FN1-213ENST00000456923 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
FN1-213ENST00000456923 RBM10P98175 930 aaKnown RBP9.48□□□□□ -0.89
FN1-213ENST00000456923 CLTCL1P53675 1640 aa9.48□□□□□ -0.89
FN1-213ENST00000456923 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
FN1-213ENST00000456923 ARID3CA6NKF2 412 aa9.48□□□□□ -0.89
FN1-213ENST00000456923 TSPY4P0CV99 314 aa9.47□□□□□ -0.89
FN1-213ENST00000456923 TSPY10P0CW01 314 aa9.47□□□□□ -0.89
FN1-213ENST00000456923 XRN1Q8IZH2 1706 aaKnown RBP9.47□□□□□ -0.89
FN1-213ENST00000456923 CHD2O14647 1828 aaKnown RBP9.47□□□□□ -0.89
FN1-213ENST00000456923 CPS1P31327 1500 aa9.47□□□□□ -0.89
FN1-213ENST00000456923 NRXN1Q9ULB1 1477 aa9.46□□□□□ -0.89
FN1-213ENST00000456923 XIRP1Q702N8 1843 aaKnown RBP9.46□□□□□ -0.9
FN1-213ENST00000456923 KANK1Q14678 1352 aa9.45□□□□□ -0.9
FN1-213ENST00000456923 IRX6P78412 446 aaPredicted RBP9.45□□□□□ -0.9
FN1-213ENST00000456923 NEXMIFQ5QGS0 1516 aa9.45□□□□□ -0.9
FN1-213ENST00000456923 MIER1Q8N108 512 aa9.44□□□□□ -0.9
FN1-213ENST00000456923 TNRQ92752 1358 aa9.44□□□□□ -0.9
FN1-213ENST00000456923 MSH5O43196 834 aa9.44□□□□□ -0.9
FN1-213ENST00000456923 STRCP1A6NGW2 1772 aa9.44□□□□□ -0.9
FN1-213ENST00000456923 ALKQ9UM73 1620 aa9.43□□□□□ -0.9
FN1-213ENST00000456923 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
FN1-213ENST00000456923 ATP1B4Q9UN42 357 aaPredicted RBP9.43□□□□□ -0.9
FN1-213ENST00000456923 NCOA3Q9Y6Q9 1424 aa9.42□□□□□ -0.9
FN1-213ENST00000456923 MYOM2P54296 1465 aa9.42□□□□□ -0.9
FN1-213ENST00000456923 FGD1P98174 961 aa9.42□□□□□ -0.9
FN1-213ENST00000456923 FKBP8Q14318 412 aa9.41□□□□□ -0.9
FN1-213ENST00000456923 NKTRP30414 1462 aaKnown RBP9.41□□□□□ -0.9
FN1-213ENST00000456923 PKD2Q13563 968 aa9.4□□□□□ -0.91
FN1-213ENST00000456923 ERICH6BQ5W0A0 696 aa9.4□□□□□ -0.91
FN1-213ENST00000456923 PIK3R4Q99570 1358 aa9.39□□□□□ -0.91
FN1-213ENST00000456923 SCAF11Q99590 1463 aaKnown RBP9.38□□□□□ -0.91
FN1-213ENST00000456923 SETD5Q9C0A6 1442 aa9.38□□□□□ -0.91
FN1-213ENST00000456923 SPATA31E1Q6ZUB1 1445 aa9.37□□□□□ -0.91
FN1-213ENST00000456923 SLC52A1Q9NWF4 448 aa9.36□□□□□ -0.91
FN1-213ENST00000456923 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
FN1-213ENST00000456923 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
FN1-213ENST00000456923 PLEKHG1Q9ULL1 1385 aa9.36□□□□□ -0.91
FN1-213ENST00000456923 DLC1Q96QB1 1528 aa9.35□□□□□ -0.91
FN1-213ENST00000456923 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
FN1-213ENST00000456923 AAMPQ13685 434 aa9.34□□□□□ -0.91
FN1-213ENST00000456923 TMEM2Q9UHN6 1383 aa9.34□□□□□ -0.91
FN1-213ENST00000456923 KIF3BO15066 747 aa9.33□□□□□ -0.92
FN1-213ENST00000456923 DMRT2Q9Y5R5 561 aa9.33□□□□□ -0.92
FN1-213ENST00000456923 TECPR2O15040 1411 aa9.33□□□□□ -0.92
FN1-213ENST00000456923 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
FN1-213ENST00000456923 USP35Q9P2H5 1018 aa9.32□□□□□ -0.92
FN1-213ENST00000456923 RPGRIP1LQ68CZ1 1315 aa9.32□□□□□ -0.92
FN1-213ENST00000456923 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
FN1-213ENST00000456923 CHMP4BQ9H444 224 aaKnown RBP9.32□□□□□ -0.92
FN1-213ENST00000456923 WASHC2CQ9Y4E1 1318 aa9.31□□□□□ -0.92
FN1-213ENST00000456923 DCCP43146 1447 aa9.3□□□□□ -0.92
FN1-213ENST00000456923 PTCH1Q13635 1447 aa9.3□□□□□ -0.92
FN1-213ENST00000456923 ADAMTS13Q76LX8 1427 aa9.29□□□□□ -0.92
FN1-213ENST00000456923 CHMP4AQ9BY43 222 aa9.29□□□□□ -0.92
FN1-213ENST00000456923 NHSL1Q5SYE7 1610 aa9.28□□□□□ -0.92
FN1-213ENST00000456923 CDC42BPGQ6DT37 1551 aa9.28□□□□□ -0.92
FN1-213ENST00000456923 C11orf95C9JLR9 678 aaPredicted RBP9.28□□□□□ -0.92
FN1-213ENST00000456923 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
FN1-213ENST00000456923 ASXL1Q8IXJ9 1541 aa9.28□□□□□ -0.92
FN1-213ENST00000456923 ANKRD30BQ9BXX2 1392 aa9.28□□□□□ -0.92
FN1-213ENST00000456923 ADGRB1O14514 1584 aa9.27□□□□□ -0.92
FN1-213ENST00000456923 PIK3C2GO75747 1445 aa9.27□□□□□ -0.92
FN1-213ENST00000456923 NCBP3Q53F19 620 aaKnown RBP9.27□□□□□ -0.93
FN1-213ENST00000456923 NAP1L5Q96NT1 182 aaPredicted RBP9.27□□□□□ -0.93
FN1-213ENST00000456923 RRP7BPQ9NSQ0 103 aa9.27□□□□□ -0.93
FN1-213ENST00000456923 THEMISQ8N1K5 641 aaPredicted RBP9.27□□□□□ -0.93
FN1-213ENST00000456923 TRPM1Q7Z4N2 1603 aa9.27□□□□□ -0.93
FN1-213ENST00000456923 NUP155O75694 1391 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 RIMS2Q9UQ26 1411 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 LRRC7Q96NW7 1537 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 BRPF3Q9ULD4 1205 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 RAB3GAP2Q9H2M9 1393 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 AHDC1Q5TGY3 1603 aaPredicted RBP9.26□□□□□ -0.93
FN1-213ENST00000456923 ARHGEF28Q8N1W1 1705 aaKnown RBP9.26□□□□□ -0.93
FN1-213ENST00000456923 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
FN1-213ENST00000456923 FMN2Q9NZ56 1722 aa9.25□□□□□ -0.93
FN1-213ENST00000456923 TAF7LQ5H9L4 462 aa9.25□□□□□ -0.93
FN1-213ENST00000456923 KIF1AQ12756 1690 aa9.25□□□□□ -0.93
FN1-213ENST00000456923 COL22A1Q8NFW1 1626 aaPredicted RBP9.25□□□□□ -0.93
FN1-213ENST00000456923 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
FN1-213ENST00000456923 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.24□□□□□ -0.93
FN1-213ENST00000456923 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms