RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SCAF11Q99590 1463 aaKnown RBP15.92■□□□□ 0.14
VTA1-203ENST00000452973 LAMC1P11047 1609 aa15.92■□□□□ 0.14
VTA1-203ENST00000452973 NOS1P29475 1434 aa15.92■□□□□ 0.14
VTA1-203ENST00000452973 TMEM132EQ6IEE7 984 aa15.91■□□□□ 0.14
VTA1-203ENST00000452973 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
VTA1-203ENST00000452973 NLRP13Q86W25 1043 aa15.9■□□□□ 0.14
VTA1-203ENST00000452973 KNSTRNQ9Y448 316 aa15.9■□□□□ 0.14
VTA1-203ENST00000452973 KIF1BO60333 1816 aa15.9■□□□□ 0.14
VTA1-203ENST00000452973 BRD4O60885 1362 aaPredicted RBP15.89■□□□□ 0.13
VTA1-203ENST00000452973 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
VTA1-203ENST00000452973 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
VTA1-203ENST00000452973 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
VTA1-203ENST00000452973 LMTK2Q8IWU2 1503 aa15.88■□□□□ 0.13
VTA1-203ENST00000452973 MLECQ14165 292 aa15.87■□□□□ 0.13
VTA1-203ENST00000452973 PARD3Q8TEW0 1356 aa15.87■□□□□ 0.13
VTA1-203ENST00000452973 ABCC3O15438 1527 aa15.87■□□□□ 0.13
VTA1-203ENST00000452973 MROH2AA6NES4 1674 aa15.87■□□□□ 0.13
VTA1-203ENST00000452973 DIP2CQ9Y2E4 1556 aa15.87■□□□□ 0.13
VTA1-203ENST00000452973 MAP3K4Q9Y6R4 1608 aa15.86■□□□□ 0.13
VTA1-203ENST00000452973 IDI1Q13907 227 aa15.86■□□□□ 0.13
VTA1-203ENST00000452973 IQGAP1P46940 1657 aa15.85■□□□□ 0.13
VTA1-203ENST00000452973 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
VTA1-203ENST00000452973 RICTORQ6R327 1708 aa15.84■□□□□ 0.13
VTA1-203ENST00000452973 MYOM2P54296 1465 aa15.83■□□□□ 0.13
VTA1-203ENST00000452973 SAFB2Q14151 953 aaKnown RBP eCLIP15.82■□□□□ 0.12
VTA1-203ENST00000452973 ADGRB3O60242 1522 aa15.82■□□□□ 0.12
VTA1-203ENST00000452973 C14orf93Q9H972 538 aaKnown RBP15.81■□□□□ 0.12
VTA1-203ENST00000452973 CENPJQ9HC77 1338 aaPredicted RBP15.81■□□□□ 0.12
VTA1-203ENST00000452973 CAMSAP1Q5T5Y3 1602 aa15.81■□□□□ 0.12
VTA1-203ENST00000452973 STK26Q9P289 416 aa15.8■□□□□ 0.12
VTA1-203ENST00000452973 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
VTA1-203ENST00000452973 LRPPRCP42704 1394 aaKnown RBP15.8■□□□□ 0.12
VTA1-203ENST00000452973 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
VTA1-203ENST00000452973 NUDCQ9Y266 331 aa15.8■□□□□ 0.12
VTA1-203ENST00000452973 AMER1Q5JTC6 1135 aaPredicted RBP15.79■□□□□ 0.12
VTA1-203ENST00000452973 DIP2BQ9P265 1576 aa15.79■□□□□ 0.12
VTA1-203ENST00000452973 SIGLEC1Q9BZZ2 1709 aa15.79■□□□□ 0.12
VTA1-203ENST00000452973 GLI2P10070 1586 aa15.78■□□□□ 0.12
VTA1-203ENST00000452973 RPGRIP1LQ68CZ1 1315 aa15.78■□□□□ 0.12
VTA1-203ENST00000452973 NEURL4Q96JN8 1562 aa15.78■□□□□ 0.12
VTA1-203ENST00000452973 PPP2R1AP30153 589 aa15.77■□□□□ 0.12
VTA1-203ENST00000452973 PIK3C2GO75747 1445 aa15.77■□□□□ 0.12
VTA1-203ENST00000452973 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.12
VTA1-203ENST00000452973 IFT172Q9UG01 1749 aa15.76■□□□□ 0.11
VTA1-203ENST00000452973 SLC52A1Q9NWF4 448 aa15.76■□□□□ 0.11
VTA1-203ENST00000452973 KIAA1210Q9ULL0 1709 aa15.76■□□□□ 0.11
VTA1-203ENST00000452973 ERVK-7P63135 1459 aa15.76■□□□□ 0.11
VTA1-203ENST00000452973 SYNMO15061 1565 aa15.76■□□□□ 0.11
VTA1-203ENST00000452973 NRXN1Q9ULB1 1477 aa15.76■□□□□ 0.11
VTA1-203ENST00000452973 SLC12A5Q9H2X9 1139 aa15.75■□□□□ 0.11
VTA1-203ENST00000452973 SMG6Q86US8 1419 aaKnown RBP15.75■□□□□ 0.11
VTA1-203ENST00000452973 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
VTA1-203ENST00000452973 ADAMTS8Q9UP79 889 aa15.75■□□□□ 0.11
VTA1-203ENST00000452973 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
VTA1-203ENST00000452973 TNNT2P45379 298 aaPredicted RBP15.74■□□□□ 0.11
VTA1-203ENST00000452973 WDR43Q15061 677 aaKnown RBP eCLIP15.74■□□□□ 0.11
VTA1-203ENST00000452973 B4GALNT3Q6L9W6 998 aa15.73■□□□□ 0.11
VTA1-203ENST00000452973 PPLO60437 1756 aa15.73■□□□□ 0.11
VTA1-203ENST00000452973 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
VTA1-203ENST00000452973 KDM5AP29375 1690 aaKnown RBP15.72■□□□□ 0.11
VTA1-203ENST00000452973 ARHGAP31Q2M1Z3 1444 aa15.72■□□□□ 0.11
VTA1-203ENST00000452973 ESF1Q9H501 851 aaKnown RBP15.71■□□□□ 0.11
VTA1-203ENST00000452973 PPP4R2Q9NY27 417 aa15.71■□□□□ 0.11
VTA1-203ENST00000452973 ASXL1Q8IXJ9 1541 aa15.71■□□□□ 0.11
VTA1-203ENST00000452973 CABP2Q9NPB3 220 aa15.7■□□□□ 0.1
VTA1-203ENST00000452973 MYOM1P52179 1685 aa15.69■□□□□ 0.1
VTA1-203ENST00000452973 NEXMIFQ5QGS0 1516 aa15.68■□□□□ 0.1
VTA1-203ENST00000452973 ADGRB1O14514 1584 aa15.68■□□□□ 0.1
VTA1-203ENST00000452973 CCDC146Q8IYE0 955 aa15.68■□□□□ 0.1
VTA1-203ENST00000452973 ZMYM4Q5VZL5 1548 aa15.68■□□□□ 0.1
VTA1-203ENST00000452973 PIK3C2BO00750 1634 aa15.67■□□□□ 0.1
VTA1-203ENST00000452973 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
VTA1-203ENST00000452973 SETBP1Q9Y6X0 1596 aa15.67■□□□□ 0.1
VTA1-203ENST00000452973 ZC3H13Q5T200 1668 aaKnown RBP15.67■□□□□ 0.1
VTA1-203ENST00000452973 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
VTA1-203ENST00000452973 POGKQ9P215 609 aa15.67■□□□□ 0.1
VTA1-203ENST00000452973 SBNO2Q9Y2G9 1366 aa15.66■□□□□ 0.1
VTA1-203ENST00000452973 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
VTA1-203ENST00000452973 PLPPR3Q6T4P5 718 aa15.66■□□□□ 0.1
VTA1-203ENST00000452973 MYO5BQ9ULV0 1848 aa15.65■□□□□ 0.1
VTA1-203ENST00000452973 PREX1Q8TCU6 1659 aa15.65■□□□□ 0.1
VTA1-203ENST00000452973 MORC1Q86VD1 984 aa15.65■□□□□ 0.1
VTA1-203ENST00000452973 NSD3Q9BZ95 1437 aa15.65■□□□□ 0.1
VTA1-203ENST00000452973 PRAM1Q96QH2 718 aa15.65■□□□□ 0.1
VTA1-203ENST00000452973 ERICH6BQ5W0A0 696 aa15.65■□□□□ 0.1
VTA1-203ENST00000452973 QRICH2Q9H0J4 1663 aa15.64■□□□□ 0.09
VTA1-203ENST00000452973 RCAN3Q9UKA8 241 aa15.64■□□□□ 0.09
VTA1-203ENST00000452973 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
VTA1-203ENST00000452973 BLMP54132 1417 aaPredicted RBP15.62■□□□□ 0.09
VTA1-203ENST00000452973 CLTCQ00610 1675 aaKnown RBP15.61■□□□□ 0.09
VTA1-203ENST00000452973 MYO3AQ8NEV4 1616 aa15.61■□□□□ 0.09
VTA1-203ENST00000452973 NPC1L1Q9UHC9 1359 aa15.61■□□□□ 0.09
VTA1-203ENST00000452973 TMEM131LA2VDJ0 1609 aa15.61■□□□□ 0.09
VTA1-203ENST00000452973 CCDC136Q96JN2 1154 aa15.6■□□□□ 0.09
VTA1-203ENST00000452973 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
VTA1-203ENST00000452973 APAF1O14727 1248 aa15.59■□□□□ 0.09
VTA1-203ENST00000452973 PLIN1O60240 522 aa15.59■□□□□ 0.09
VTA1-203ENST00000452973 RRP1P56182 461 aaKnown RBP15.59■□□□□ 0.09
VTA1-203ENST00000452973 KIF13AQ9H1H9 1805 aa15.58■□□□□ 0.09
VTA1-203ENST00000452973 RNF123Q5XPI4 1314 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms