RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 TEFQ10587 303 aa16.26■□□□□ 0.19
SMARCA4-205ENST00000450717 GRIN2BQ13224 1484 aa16.26■□□□□ 0.19
SMARCA4-205ENST00000450717 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
SMARCA4-205ENST00000450717 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-205ENST00000450717 EHBP1L1Q8N3D4 1523 aa16.25■□□□□ 0.19
SMARCA4-205ENST00000450717 SYNJ1O43426 1573 aa16.25■□□□□ 0.19
SMARCA4-205ENST00000450717 GNAI1P63096 354 aa16.24■□□□□ 0.19
SMARCA4-205ENST00000450717 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-205ENST00000450717 AQRO60306 1485 aaKnown RBP eCLIP16.24■□□□□ 0.192e-7■■■■□ 24.9
SMARCA4-205ENST00000450717 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
SMARCA4-205ENST00000450717 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
SMARCA4-205ENST00000450717 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
SMARCA4-205ENST00000450717 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-205ENST00000450717 H3BQV1 296 aa16.23■□□□□ 0.19
SMARCA4-205ENST00000450717 IFFO2Q5TF58 517 aa16.23■□□□□ 0.19
SMARCA4-205ENST00000450717 CFTRP13569 1480 aa16.23■□□□□ 0.19
SMARCA4-205ENST00000450717 SLC4A3P48751 1232 aa16.22■□□□□ 0.19
SMARCA4-205ENST00000450717 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
SMARCA4-205ENST00000450717 CCDC9Q9Y3X0 531 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-205ENST00000450717 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
SMARCA4-205ENST00000450717 NOC3LQ8WTT2 800 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-205ENST00000450717 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
SMARCA4-205ENST00000450717 FOXD4L5Q5VV16 416 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-205ENST00000450717 FOXD4L4Q8WXT5 416 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-205ENST00000450717 CHMP5Q9NZZ3 219 aa16.21■□□□□ 0.19
SMARCA4-205ENST00000450717 HFM1A2PYH4 1435 aa16.21■□□□□ 0.18
SMARCA4-205ENST00000450717 RASSF8Q8NHQ8 419 aa16.2■□□□□ 0.18
SMARCA4-205ENST00000450717 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
SMARCA4-205ENST00000450717 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
SMARCA4-205ENST00000450717 C9orf78Q9NZ63 289 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-205ENST00000450717 TOP2BQ02880 1626 aa16.19■□□□□ 0.18
SMARCA4-205ENST00000450717 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
SMARCA4-205ENST00000450717 ZKSCAN1P17029 563 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-205ENST00000450717 PRXQ9BXM0 1461 aa16.18■□□□□ 0.18
SMARCA4-205ENST00000450717 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-205ENST00000450717 SCAPERQ9BY12 1400 aa16.18■□□□□ 0.18
SMARCA4-205ENST00000450717 INTS3Q68E01 1043 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-205ENST00000450717 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-205ENST00000450717 IFIT2P09913 472 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-205ENST00000450717 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
SMARCA4-205ENST00000450717 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-205ENST00000450717 GTF2E1P29083 439 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-205ENST00000450717 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
SMARCA4-205ENST00000450717 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
SMARCA4-205ENST00000450717 GOLGA6L1Q8N7Z2 621 aa16.15■□□□□ 0.18
SMARCA4-205ENST00000450717 RSPH6AQ9H0K4 717 aa16.15■□□□□ 0.18
SMARCA4-205ENST00000450717 GOLGA6L19H0YKK7 550 aa16.15■□□□□ 0.18
SMARCA4-205ENST00000450717 HECW1Q76N89 1606 aa16.15■□□□□ 0.18
SMARCA4-205ENST00000450717 FKBP5Q13451 457 aaPredicted RBP16.14■□□□□ 0.18
SMARCA4-205ENST00000450717 TIAM1Q13009 1591 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 RNF20Q5VTR2 975 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 CPLX2Q6PUV4 134 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 ADAMTS8Q9UP79 889 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 TPM3P06753 285 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 G3V3G9 751 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 SYNE3Q6ZMZ3 975 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 NUCB2P80303 420 aa16.14■□□□□ 0.17
SMARCA4-205ENST00000450717 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
SMARCA4-205ENST00000450717 AKAP17AQ02040 695 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-205ENST00000450717 ANO2Q9NQ90 1003 aa16.13■□□□□ 0.17
SMARCA4-205ENST00000450717 PPP2R1AP30153 589 aa16.12■□□□□ 0.17
SMARCA4-205ENST00000450717 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
SMARCA4-205ENST00000450717 BECN2A8MW95 431 aa16.12■□□□□ 0.17
SMARCA4-205ENST00000450717 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.172e-7■■□□□ 14.1
SMARCA4-205ENST00000450717 C22orf23Q9BZE7 217 aa16.12■□□□□ 0.17
SMARCA4-205ENST00000450717 C9orf84Q5VXU9 1444 aa16.12■□□□□ 0.17
SMARCA4-205ENST00000450717 PSME1Q06323 249 aa16.12■□□□□ 0.17
SMARCA4-205ENST00000450717 EVA1CP58658 441 aa16.11■□□□□ 0.17
SMARCA4-205ENST00000450717 GGNBP2Q9H3C7 697 aa16.11■□□□□ 0.17
SMARCA4-205ENST00000450717 HMGXB3Q12766 1538 aa16.11■□□□□ 0.17
SMARCA4-205ENST00000450717 ERC2O15083 957 aa16.11■□□□□ 0.17
SMARCA4-205ENST00000450717 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
SMARCA4-205ENST00000450717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMARCA4-205ENST00000450717 PANK1Q8TE04 598 aa16.11■□□□□ 0.17
SMARCA4-205ENST00000450717 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
SMARCA4-205ENST00000450717 CDC45O75419 566 aa16.1■□□□□ 0.17
SMARCA4-205ENST00000450717 LNPKQ9C0E8 428 aa16.09■□□□□ 0.17
SMARCA4-205ENST00000450717 MRC2Q9UBG0 1479 aa16.09■□□□□ 0.17
SMARCA4-205ENST00000450717 HMOX1P09601 288 aa16.09■□□□□ 0.17
SMARCA4-205ENST00000450717 MTHFSP49914 203 aa16.09■□□□□ 0.17
SMARCA4-205ENST00000450717 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-205ENST00000450717 TROQ12816 1431 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-205ENST00000450717 MARCH6O60337 910 aa16.09■□□□□ 0.17
SMARCA4-205ENST00000450717 TRIM29Q14134 588 aa16.08■□□□□ 0.17
SMARCA4-205ENST00000450717 CREBRFQ8IUR6 639 aa16.08■□□□□ 0.17
SMARCA4-205ENST00000450717 ARID3AQ99856 593 aa16.08■□□□□ 0.17
SMARCA4-205ENST00000450717 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.17
SMARCA4-205ENST00000450717 MCTP1Q6DN14 999 aa16.08■□□□□ 0.17
SMARCA4-205ENST00000450717 TCP11L2Q8N4U5 519 aa16.08■□□□□ 0.17
SMARCA4-205ENST00000450717 PRG4Q92954 1404 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-205ENST00000450717 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
SMARCA4-205ENST00000450717 NINLQ9Y2I6 1382 aa16.07■□□□□ 0.16
SMARCA4-205ENST00000450717 TPM1P09493 284 aa16.07■□□□□ 0.16
SMARCA4-205ENST00000450717 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-205ENST00000450717 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
SMARCA4-205ENST00000450717 CFAP70Q5T0N1 1121 aa16.07■□□□□ 0.16
SMARCA4-205ENST00000450717 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
SMARCA4-205ENST00000450717 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms