RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 HECW2Q9P2P5 1572 aa17.79■□□□□ 0.44
SYNGAP1-204ENST00000449372 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
SYNGAP1-204ENST00000449372 PPRC1Q5VV67 1664 aaKnown RBP17.78■□□□□ 0.44
SYNGAP1-204ENST00000449372 PRKRIP1Q9H875 184 aaPredicted RBP17.78■□□□□ 0.44
SYNGAP1-204ENST00000449372 ZNF326Q5BKZ1 582 aaKnown RBP17.78■□□□□ 0.44
SYNGAP1-204ENST00000449372 ABCA6Q8N139 1617 aa17.78■□□□□ 0.44
SYNGAP1-204ENST00000449372 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.43
SYNGAP1-204ENST00000449372 NEO1Q92859 1461 aa17.76■□□□□ 0.43
SYNGAP1-204ENST00000449372 KDM2AQ9Y2K7 1162 aa17.76■□□□□ 0.43
SYNGAP1-204ENST00000449372 IFT172Q9UG01 1749 aa17.76■□□□□ 0.43
SYNGAP1-204ENST00000449372 RICTORQ6R327 1708 aa17.76■□□□□ 0.43
SYNGAP1-204ENST00000449372 NFKBIBQ15653 356 aa17.76■□□□□ 0.43
SYNGAP1-204ENST00000449372 GLI2P10070 1586 aa17.76■□□□□ 0.43
SYNGAP1-204ENST00000449372 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
SYNGAP1-204ENST00000449372 ROCK2O75116 1388 aaKnown RBP17.75■□□□□ 0.43
SYNGAP1-204ENST00000449372 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
SYNGAP1-204ENST00000449372 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
SYNGAP1-204ENST00000449372 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
SYNGAP1-204ENST00000449372 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
SYNGAP1-204ENST00000449372 HSP90AA2PQ14568 343 aaPredicted RBP17.73■□□□□ 0.43
SYNGAP1-204ENST00000449372 CCDC184Q52MB2 194 aa17.73■□□□□ 0.43
SYNGAP1-204ENST00000449372 KIAA1210Q9ULL0 1709 aa17.72■□□□□ 0.43
SYNGAP1-204ENST00000449372 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
SYNGAP1-204ENST00000449372 NBPF1Q3BBV0 1214 aa17.72■□□□□ 0.43
SYNGAP1-204ENST00000449372 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
SYNGAP1-204ENST00000449372 PDE4AP27815 886 aa17.7■□□□□ 0.42
SYNGAP1-204ENST00000449372 RGL3Q3MIN7 710 aa17.7■□□□□ 0.42
SYNGAP1-204ENST00000449372 KANK1Q14678 1352 aa17.69■□□□□ 0.42
SYNGAP1-204ENST00000449372 DIP2CQ9Y2E4 1556 aa17.69■□□□□ 0.42
SYNGAP1-204ENST00000449372 KIF3BO15066 747 aa17.69■□□□□ 0.42
SYNGAP1-204ENST00000449372 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
SYNGAP1-204ENST00000449372 KIF1BO60333 1816 aa17.69■□□□□ 0.42
SYNGAP1-204ENST00000449372 UGGT1Q9NYU2 1555 aa17.68■□□□□ 0.42
SYNGAP1-204ENST00000449372 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
SYNGAP1-204ENST00000449372 TESK2Q96S53 571 aa17.67■□□□□ 0.42
SYNGAP1-204ENST00000449372 RRP9O43818 475 aaKnown RBP17.67■□□□□ 0.42
SYNGAP1-204ENST00000449372 A0A0U1RQG5 324 aaPredicted RBP17.66■□□□□ 0.42
SYNGAP1-204ENST00000449372 NUDCQ9Y266 331 aa17.66■□□□□ 0.42
SYNGAP1-204ENST00000449372 DDRGK1Q96HY6 314 aa17.66■□□□□ 0.42
SYNGAP1-204ENST00000449372 MYOM2P54296 1465 aa17.65■□□□□ 0.42
SYNGAP1-204ENST00000449372 BACH2Q9BYV9 841 aa17.65■□□□□ 0.42
SYNGAP1-204ENST00000449372 NRXN1Q9ULB1 1477 aa17.65■□□□□ 0.42
SYNGAP1-204ENST00000449372 SIGLEC1Q9BZZ2 1709 aa17.65■□□□□ 0.42
SYNGAP1-204ENST00000449372 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
SYNGAP1-204ENST00000449372 DIP2BQ9P265 1576 aa17.64■□□□□ 0.41
SYNGAP1-204ENST00000449372 ADGRB3O60242 1522 aa17.64■□□□□ 0.41
SYNGAP1-204ENST00000449372 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.41
SYNGAP1-204ENST00000449372 TMC1Q8TDI8 760 aa17.64■□□□□ 0.41
SYNGAP1-204ENST00000449372 ABCC3O15438 1527 aa17.64■□□□□ 0.41
SYNGAP1-204ENST00000449372 CAMSAP1Q5T5Y3 1602 aa17.63■□□□□ 0.41
SYNGAP1-204ENST00000449372 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
SYNGAP1-204ENST00000449372 KTN1Q86UP2 1357 aaKnown RBP17.63■□□□□ 0.41
SYNGAP1-204ENST00000449372 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
SYNGAP1-204ENST00000449372 RRAGDQ9NQL2 400 aaPredicted RBP17.62■□□□□ 0.41
SYNGAP1-204ENST00000449372 PIK3C2BO00750 1634 aa17.62■□□□□ 0.41
SYNGAP1-204ENST00000449372 NPATQ14207 1427 aa17.62■□□□□ 0.41
SYNGAP1-204ENST00000449372 POLR3GLQ9BT43 218 aa17.61■□□□□ 0.41
SYNGAP1-204ENST00000449372 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
SYNGAP1-204ENST00000449372 ZMYM4Q5VZL5 1548 aa17.61■□□□□ 0.41
SYNGAP1-204ENST00000449372 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
SYNGAP1-204ENST00000449372 PPLO60437 1756 aa17.6■□□□□ 0.41
SYNGAP1-204ENST00000449372 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
SYNGAP1-204ENST00000449372 PER1O15534 1290 aaPredicted RBP17.57■□□□□ 0.4
SYNGAP1-204ENST00000449372 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
SYNGAP1-204ENST00000449372 SCAF11Q99590 1463 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-204ENST00000449372 SYNMO15061 1565 aa17.56■□□□□ 0.4
SYNGAP1-204ENST00000449372 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
SYNGAP1-204ENST00000449372 MS4A1P11836 297 aa17.56■□□□□ 0.4
SYNGAP1-204ENST00000449372 NOS1P29475 1434 aa17.56■□□□□ 0.4
SYNGAP1-204ENST00000449372 MYO3AQ8NEV4 1616 aa17.56■□□□□ 0.4
SYNGAP1-204ENST00000449372 MYOM1P52179 1685 aa17.56■□□□□ 0.4
SYNGAP1-204ENST00000449372 RALBP1Q15311 655 aa17.56■□□□□ 0.4
SYNGAP1-204ENST00000449372 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
SYNGAP1-204ENST00000449372 RBM10P98175 930 aaKnown RBP17.54■□□□□ 0.4
SYNGAP1-204ENST00000449372 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
SYNGAP1-204ENST00000449372 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-204ENST00000449372 ARHGAP31Q2M1Z3 1444 aa17.53■□□□□ 0.4
SYNGAP1-204ENST00000449372 YEATS2Q9ULM3 1422 aa17.53■□□□□ 0.4
SYNGAP1-204ENST00000449372 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
SYNGAP1-204ENST00000449372 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
SYNGAP1-204ENST00000449372 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
SYNGAP1-204ENST00000449372 PDE4CQ08493 712 aa17.53■□□□□ 0.4
SYNGAP1-204ENST00000449372 REREQ9P2R6 1566 aa17.52■□□□□ 0.4
SYNGAP1-204ENST00000449372 CFAP65Q6ZU64 1925 aaKnown RBP17.52■□□□□ 0.39
SYNGAP1-204ENST00000449372 LRPPRCP42704 1394 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-204ENST00000449372 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
SYNGAP1-204ENST00000449372 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
SYNGAP1-204ENST00000449372 PIK3C2GO75747 1445 aa17.48■□□□□ 0.39
SYNGAP1-204ENST00000449372 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
SYNGAP1-204ENST00000449372 BRD4O60885 1362 aaPredicted RBP17.48■□□□□ 0.39
SYNGAP1-204ENST00000449372 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
SYNGAP1-204ENST00000449372 AAMPQ13685 434 aa17.47■□□□□ 0.39
SYNGAP1-204ENST00000449372 PREX1Q8TCU6 1659 aa17.47■□□□□ 0.39
SYNGAP1-204ENST00000449372 NEXMIFQ5QGS0 1516 aa17.46■□□□□ 0.39
SYNGAP1-204ENST00000449372 TSPOAP1O95153 1857 aa17.46■□□□□ 0.39
SYNGAP1-204ENST00000449372 TMF1P82094 1093 aa17.46■□□□□ 0.39
SYNGAP1-204ENST00000449372 MYBBP1AQ9BQG0 1328 aaKnown RBP17.46■□□□□ 0.39
SYNGAP1-204ENST00000449372 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
SYNGAP1-204ENST00000449372 FGD1P98174 961 aa17.45■□□□□ 0.38
SYNGAP1-204ENST00000449372 GGT6Q6P531 493 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms