RNA–Protein interactions for RNA: ENST00000448693.2

SPCS1-203, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-203ENST00000448693 GCC2Q8IWJ2 1684 aa15.43■□□□□ 0.06
SPCS1-203ENST00000448693 STRCP1A6NGW2 1772 aa15.42■□□□□ 0.06
SPCS1-203ENST00000448693 SSUH2Q9Y2M2 353 aa15.42■□□□□ 0.06
SPCS1-203ENST00000448693 LMTK2Q8IWU2 1503 aa15.42■□□□□ 0.06
SPCS1-203ENST00000448693 TET3O43151 1660 aa15.41■□□□□ 0.06
SPCS1-203ENST00000448693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.4■□□□□ 0.066e-7■■■■□ 24.4
SPCS1-203ENST00000448693 ZNF335Q9H4Z2 1342 aaPredicted RBP15.4■□□□□ 0.06
SPCS1-203ENST00000448693 E9PCH4 1651 aa15.38■□□□□ 0.05
SPCS1-203ENST00000448693 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
SPCS1-203ENST00000448693 IQGAP3Q86VI3 1631 aa15.36■□□□□ 0.05
SPCS1-203ENST00000448693 ANKRD50Q9ULJ7 1429 aa15.36■□□□□ 0.05
SPCS1-203ENST00000448693 KDM5AP29375 1690 aaKnown RBP15.36■□□□□ 0.05
SPCS1-203ENST00000448693 PKD2Q13563 968 aa15.36■□□□□ 0.05
SPCS1-203ENST00000448693 ADGRB3O60242 1522 aa15.35■□□□□ 0.05
SPCS1-203ENST00000448693 IQSEC2Q5JU85 1478 aa15.34■□□□□ 0.05
SPCS1-203ENST00000448693 KANK1Q14678 1352 aa15.34■□□□□ 0.05
SPCS1-203ENST00000448693 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
SPCS1-203ENST00000448693 MED14O60244 1454 aa15.33■□□□□ 0.05
SPCS1-203ENST00000448693 SLIT1O75093 1534 aa15.33■□□□□ 0.04
SPCS1-203ENST00000448693 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
SPCS1-203ENST00000448693 ARHGAP23Q9P227 1491 aa15.32■□□□□ 0.04
SPCS1-203ENST00000448693 XIRP1Q702N8 1843 aaKnown RBP15.31■□□□□ 0.04
SPCS1-203ENST00000448693 SCAF11Q99590 1463 aaKnown RBP15.31■□□□□ 0.04
SPCS1-203ENST00000448693 NOS1P29475 1434 aa15.3■□□□□ 0.04
SPCS1-203ENST00000448693 CPS1P31327 1500 aa15.29■□□□□ 0.04
SPCS1-203ENST00000448693 ITGAEP38570 1179 aa15.29■□□□□ 0.04
SPCS1-203ENST00000448693 SPHKAPQ2M3C7 1700 aa15.29■□□□□ 0.04
SPCS1-203ENST00000448693 ROCK1Q13464 1354 aa15.28■□□□□ 0.04
SPCS1-203ENST00000448693 TMEM131LA2VDJ0 1609 aa15.28■□□□□ 0.04
SPCS1-203ENST00000448693 RRBP1Q9P2E9 1410 aaKnown RBP15.27■□□□□ 0.04
SPCS1-203ENST00000448693 THEMISQ8N1K5 641 aaPredicted RBP15.27■□□□□ 0.04
SPCS1-203ENST00000448693 ALKQ9UM73 1620 aa15.27■□□□□ 0.03
SPCS1-203ENST00000448693 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.03
SPCS1-203ENST00000448693 ANKLE2Q86XL3 938 aa15.26■□□□□ 0.03
SPCS1-203ENST00000448693 LTKP29376 864 aa15.22■□□□□ 0.03
SPCS1-203ENST00000448693 TMEM2Q9UHN6 1383 aa15.22■□□□□ 0.03
SPCS1-203ENST00000448693 LRRC7Q96NW7 1537 aa15.21■□□□□ 0.03
SPCS1-203ENST00000448693 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
SPCS1-203ENST00000448693 NWD1Q149M9 1564 aa15.19■□□□□ 0.02
SPCS1-203ENST00000448693 CLTCL1P53675 1640 aa15.19■□□□□ 0.02
SPCS1-203ENST00000448693 IDI1Q13907 227 aa15.19■□□□□ 0.02
SPCS1-203ENST00000448693 ZFYVE9O95405 1425 aa15.18■□□□□ 0.02
SPCS1-203ENST00000448693 UBAP1LF5GYI3 381 aa15.18■□□□□ 0.02
SPCS1-203ENST00000448693 NAIPQ13075 1403 aa15.17■□□□□ 0.02
SPCS1-203ENST00000448693 NUP155O75694 1391 aa15.16■□□□□ 0.02
SPCS1-203ENST00000448693 CHD2O14647 1828 aaKnown RBP15.16■□□□□ 0.02
SPCS1-203ENST00000448693 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
SPCS1-203ENST00000448693 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
SPCS1-203ENST00000448693 KIF1BO60333 1816 aa15.14■□□□□ 0.01
SPCS1-203ENST00000448693 RIMS2Q9UQ26 1411 aa15.14■□□□□ 0.01
SPCS1-203ENST00000448693 NRXN3Q9Y4C0 1643 aa15.14■□□□□ 0.01
SPCS1-203ENST00000448693 TRPM2O94759 1503 aa15.12■□□□□ 0.01
SPCS1-203ENST00000448693 EID1Q9Y6B2 187 aa15.11■□□□□ 0.01
SPCS1-203ENST00000448693 HFM1A2PYH4 1435 aa15.1■□□□□ 0.01
SPCS1-203ENST00000448693 PIP4K2BP78356 416 aa15.1■□□□□ 0.01
SPCS1-203ENST00000448693 DIP2AQ14689 1571 aa15.1■□□□□ 0.01
SPCS1-203ENST00000448693 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
SPCS1-203ENST00000448693 SLC52A1Q9NWF4 448 aa15.09■□□□□ 0.01
SPCS1-203ENST00000448693 NKTRP30414 1462 aaKnown RBP15.08■□□□□ 0.01
SPCS1-203ENST00000448693 MED1Q15648 1581 aaPredicted RBP15.08■□□□□ 0
SPCS1-203ENST00000448693 CHGAP10645 457 aaKnown RBP15.08■□□□□ 0
SPCS1-203ENST00000448693 PLEKHG1Q9ULL1 1385 aa15.08■□□□□ 0
SPCS1-203ENST00000448693 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
SPCS1-203ENST00000448693 ROBO1Q9Y6N7 1651 aa15.07■□□□□ 0
SPCS1-203ENST00000448693 NUTM2DQ5VT03 806 aaPredicted RBP15.07■□□□□ 0
SPCS1-203ENST00000448693 SETD1AO15047 1707 aaKnown RBP15.06■□□□□ 0
SPCS1-203ENST00000448693 XRN1Q8IZH2 1706 aaKnown RBP15.06■□□□□ 0
SPCS1-203ENST00000448693 DISP3Q9P2K9 1392 aa15.06■□□□□ 0
SPCS1-203ENST00000448693 ADAMTS13Q76LX8 1427 aa15.06■□□□□ 0
SPCS1-203ENST00000448693 PPLO60437 1756 aa15.06■□□□□ 0
SPCS1-203ENST00000448693 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
SPCS1-203ENST00000448693 SETBP1Q9Y6X0 1596 aa15.04■□□□□ -0
SPCS1-203ENST00000448693 TMEM94Q12767 1356 aa15.04■□□□□ -0
SPCS1-203ENST00000448693 PPP1R15AO75807 674 aaPredicted RBP15.04■□□□□ -0
SPCS1-203ENST00000448693 HSPA1LP34931 641 aa15.04■□□□□ -0
SPCS1-203ENST00000448693 RBM33Q96EV2 1170 aaKnown RBP15.04■□□□□ -0
SPCS1-203ENST00000448693 IFT172Q9UG01 1749 aa15.03■□□□□ -0
SPCS1-203ENST00000448693 TOM1O60784 492 aa15.02■□□□□ -0
SPCS1-203ENST00000448693 BCANQ96GW7 911 aa15.02■□□□□ -0
SPCS1-203ENST00000448693 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.01□□□□□ -0.01
SPCS1-203ENST00000448693 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
SPCS1-203ENST00000448693 NALCNQ8IZF0 1738 aa15□□□□□ -0.01
SPCS1-203ENST00000448693 PTPRUQ92729 1446 aa14.99□□□□□ -0.01
SPCS1-203ENST00000448693 PHLPP1O60346 1717 aa14.98□□□□□ -0.01
SPCS1-203ENST00000448693 KCNA6P17658 529 aa14.98□□□□□ -0.01
SPCS1-203ENST00000448693 TRIM52Q96A61 297 aa14.97□□□□□ -0.01
SPCS1-203ENST00000448693 ILDR2Q71H61 639 aa14.96□□□□□ -0.01
SPCS1-203ENST00000448693 MIER1Q8N108 512 aa14.96□□□□□ -0.01
SPCS1-203ENST00000448693 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
SPCS1-203ENST00000448693 PROSER2Q86WR7 435 aaPredicted RBP14.95□□□□□ -0.02
SPCS1-203ENST00000448693 ZNF326Q5BKZ1 582 aaKnown RBP14.94□□□□□ -0.02
SPCS1-203ENST00000448693 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPCS1-203ENST00000448693 COL16A1Q07092 1604 aaPredicted RBP14.93□□□□□ -0.02
SPCS1-203ENST00000448693 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
SPCS1-203ENST00000448693 MSH6P52701 1360 aa14.93□□□□□ -0.02
SPCS1-203ENST00000448693 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
SPCS1-203ENST00000448693 TBX22Q9Y458 520 aa14.91□□□□□ -0.02
SPCS1-203ENST00000448693 METP08581 1390 aa14.9□□□□□ -0.02
SPCS1-203ENST00000448693 PIK3R4Q99570 1358 aa14.9□□□□□ -0.02
SPCS1-203ENST00000448693 HDGFP51858 240 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms