RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TRPM2O94759 1503 aa18.04■□□□□ 0.48
LTBR-204ENST00000444814 BCANQ96GW7 911 aa18.02■□□□□ 0.48
LTBR-204ENST00000444814 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
LTBR-204ENST00000444814 CCDC144AA2RUR9 1427 aa18.01■□□□□ 0.47
LTBR-204ENST00000444814 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
LTBR-204ENST00000444814 TMEM131LA2VDJ0 1609 aa17.99■□□□□ 0.47
LTBR-204ENST00000444814 NEURL4Q96JN8 1562 aa17.98■□□□□ 0.47
LTBR-204ENST00000444814 IQGAP1P46940 1657 aa17.97■□□□□ 0.47
LTBR-204ENST00000444814 LTKP29376 864 aa17.97■□□□□ 0.47
LTBR-204ENST00000444814 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.47
LTBR-204ENST00000444814 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
LTBR-204ENST00000444814 ZFYVE9O95405 1425 aa17.94■□□□□ 0.46
LTBR-204ENST00000444814 CERKQ8TCT0 537 aa17.94■□□□□ 0.46
LTBR-204ENST00000444814 VGFO15240 615 aaPredicted RBP17.93■□□□□ 0.46
LTBR-204ENST00000444814 CLTCL1P53675 1640 aa17.93■□□□□ 0.46
LTBR-204ENST00000444814 KIF1BO60333 1816 aa17.93■□□□□ 0.46
LTBR-204ENST00000444814 CPS1P31327 1500 aa17.92■□□□□ 0.46
LTBR-204ENST00000444814 ZNF335Q9H4Z2 1342 aaPredicted RBP17.91■□□□□ 0.46
LTBR-204ENST00000444814 IQSEC2Q5JU85 1478 aa17.91■□□□□ 0.46
LTBR-204ENST00000444814 TBX22Q9Y458 520 aa17.88■□□□□ 0.45
LTBR-204ENST00000444814 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
LTBR-204ENST00000444814 SLC26A8Q96RN1 970 aa17.87■□□□□ 0.45
LTBR-204ENST00000444814 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
LTBR-204ENST00000444814 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
LTBR-204ENST00000444814 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
LTBR-204ENST00000444814 LTBP4Q8N2S1 1624 aa17.85■□□□□ 0.45
LTBR-204ENST00000444814 KCNA6P17658 529 aa17.85■□□□□ 0.45
LTBR-204ENST00000444814 NUTM2DQ5VT03 806 aaPredicted RBP17.85■□□□□ 0.45
LTBR-204ENST00000444814 FBXO41Q8TF61 875 aa17.85■□□□□ 0.45
LTBR-204ENST00000444814 MAPK8IP2Q13387 824 aaPredicted RBP17.84■□□□□ 0.45
LTBR-204ENST00000444814 RGL3Q3MIN7 710 aa17.84■□□□□ 0.45
LTBR-204ENST00000444814 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
LTBR-204ENST00000444814 NEXMIFQ5QGS0 1516 aa17.82■□□□□ 0.44
LTBR-204ENST00000444814 SPATA31E1Q6ZUB1 1445 aa17.81■□□□□ 0.44
LTBR-204ENST00000444814 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
LTBR-204ENST00000444814 NKTRP30414 1462 aaKnown RBP17.79■□□□□ 0.44
LTBR-204ENST00000444814 TOM1O60784 492 aa17.78■□□□□ 0.44
LTBR-204ENST00000444814 PROSER2Q86WR7 435 aaPredicted RBP17.78■□□□□ 0.44
LTBR-204ENST00000444814 ADAMTS13Q76LX8 1427 aa17.77■□□□□ 0.44
LTBR-204ENST00000444814 NWD1Q149M9 1564 aa17.75■□□□□ 0.43
LTBR-204ENST00000444814 PPLO60437 1756 aa17.74■□□□□ 0.43
LTBR-204ENST00000444814 UBAP1LF5GYI3 381 aa17.74■□□□□ 0.43
LTBR-204ENST00000444814 LRRC7Q96NW7 1537 aa17.73■□□□□ 0.43
LTBR-204ENST00000444814 NCOA3Q9Y6Q9 1424 aa17.73■□□□□ 0.43
LTBR-204ENST00000444814 AMOTL2Q9Y2J4 779 aa17.73■□□□□ 0.43
LTBR-204ENST00000444814 MYOM2P54296 1465 aa17.72■□□□□ 0.43
LTBR-204ENST00000444814 C14orf37Q86TY3 774 aa17.72■□□□□ 0.43
LTBR-204ENST00000444814 MSH6P52701 1360 aa17.71■□□□□ 0.43
LTBR-204ENST00000444814 TMEM94Q12767 1356 aa17.7■□□□□ 0.42
LTBR-204ENST00000444814 ADGRF5Q8IZF2 1346 aa17.7■□□□□ 0.42
LTBR-204ENST00000444814 DCAF11Q8TEB1 546 aa17.7■□□□□ 0.42
LTBR-204ENST00000444814 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
LTBR-204ENST00000444814 ILDR1Q86SU0 546 aaPredicted RBP17.69■□□□□ 0.42
LTBR-204ENST00000444814 PCGF6Q9BYE7 350 aa17.69■□□□□ 0.42
LTBR-204ENST00000444814 CHD2O14647 1828 aaKnown RBP17.69■□□□□ 0.42
LTBR-204ENST00000444814 ALKQ9UM73 1620 aa17.68■□□□□ 0.42
LTBR-204ENST00000444814 NRXN3Q9Y4C0 1643 aa17.68■□□□□ 0.42
LTBR-204ENST00000444814 PIK3C2GO75747 1445 aa17.68■□□□□ 0.42
LTBR-204ENST00000444814 METP08581 1390 aa17.67■□□□□ 0.42
LTBR-204ENST00000444814 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
LTBR-204ENST00000444814 DAXXQ9UER7 740 aaPredicted RBP17.66■□□□□ 0.42
LTBR-204ENST00000444814 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
LTBR-204ENST00000444814 LAMC1P11047 1609 aa17.66■□□□□ 0.42
LTBR-204ENST00000444814 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
LTBR-204ENST00000444814 STRCP1A6NGW2 1772 aa17.65■□□□□ 0.42
LTBR-204ENST00000444814 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
LTBR-204ENST00000444814 NRXN1Q9ULB1 1477 aa17.65■□□□□ 0.42
LTBR-204ENST00000444814 C19orf44Q9H6X5 657 aa17.64■□□□□ 0.41
LTBR-204ENST00000444814 ATF3P18847 181 aa17.63■□□□□ 0.41
LTBR-204ENST00000444814 CADPS2Q86UW7 1296 aa17.63■□□□□ 0.41
LTBR-204ENST00000444814 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
LTBR-204ENST00000444814 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
LTBR-204ENST00000444814 PTPRUQ92729 1446 aa17.62■□□□□ 0.41
LTBR-204ENST00000444814 PRAG1Q86YV5 1406 aa17.62■□□□□ 0.41
LTBR-204ENST00000444814 XRN1Q8IZH2 1706 aaKnown RBP17.62■□□□□ 0.41
LTBR-204ENST00000444814 LRPPRCP42704 1394 aaKnown RBP17.61■□□□□ 0.41
LTBR-204ENST00000444814 PIP4K2BP78356 416 aa17.61■□□□□ 0.41
LTBR-204ENST00000444814 CLSPNQ9HAW4 1339 aa17.6■□□□□ 0.41
LTBR-204ENST00000444814 ABCC11Q96J66 1382 aa17.6■□□□□ 0.41
LTBR-204ENST00000444814 DCCP43146 1447 aa17.59■□□□□ 0.41
LTBR-204ENST00000444814 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
LTBR-204ENST00000444814 TONSLQ96HA7 1378 aa17.59■□□□□ 0.41
LTBR-204ENST00000444814 SIRT1Q96EB6 747 aa17.58■□□□□ 0.41
LTBR-204ENST00000444814 STK26Q9P289 416 aa17.58■□□□□ 0.41
LTBR-204ENST00000444814 SIN3AQ96ST3 1273 aa17.57■□□□□ 0.4
LTBR-204ENST00000444814 TECPR2O15040 1411 aa17.57■□□□□ 0.4
LTBR-204ENST00000444814 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
LTBR-204ENST00000444814 SETD1AO15047 1707 aaKnown RBP17.57■□□□□ 0.4
LTBR-204ENST00000444814 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
LTBR-204ENST00000444814 TMEM132EQ6IEE7 984 aa17.56■□□□□ 0.4
LTBR-204ENST00000444814 ADGRL3Q9HAR2 1447 aa17.56■□□□□ 0.4
LTBR-204ENST00000444814 L3MBTL2Q969R5 705 aa17.55■□□□□ 0.4
LTBR-204ENST00000444814 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
LTBR-204ENST00000444814 FAM135BQ49AJ0 1406 aa17.54■□□□□ 0.4
LTBR-204ENST00000444814 ROBO2Q9HCK4 1378 aa17.54■□□□□ 0.4
LTBR-204ENST00000444814 POGKQ9P215 609 aa17.53■□□□□ 0.4
LTBR-204ENST00000444814 XIRP1Q702N8 1843 aaKnown RBP17.52■□□□□ 0.4
LTBR-204ENST00000444814 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
LTBR-204ENST00000444814 DLC1Q96QB1 1528 aa17.5■□□□□ 0.39
LTBR-204ENST00000444814 CCER1Q8TC90 406 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms