RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MED14O60244 1454 aa18.09■□□□□ 0.49
USP1-203ENST00000442679 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
USP1-203ENST00000442679 NEURL4Q96JN8 1562 aa18.08■□□□□ 0.49
USP1-203ENST00000442679 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
USP1-203ENST00000442679 ANKRD30BQ9BXX2 1392 aa18.08■□□□□ 0.49
USP1-203ENST00000442679 NUTM2DQ5VT03 806 aaPredicted RBP18.08■□□□□ 0.48
USP1-203ENST00000442679 POLR1AO95602 1720 aaPredicted RBP18.07■□□□□ 0.48
USP1-203ENST00000442679 BCANQ96GW7 911 aa18.07■□□□□ 0.48
USP1-203ENST00000442679 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
USP1-203ENST00000442679 RGL3Q3MIN7 710 aa18.05■□□□□ 0.48
USP1-203ENST00000442679 RPGRIP1LQ68CZ1 1315 aa18.03■□□□□ 0.48
USP1-203ENST00000442679 KIF1BO60333 1816 aa18.02■□□□□ 0.48
USP1-203ENST00000442679 SLC26A8Q96RN1 970 aa18.02■□□□□ 0.48
USP1-203ENST00000442679 IQGAP1P46940 1657 aa18.02■□□□□ 0.47
USP1-203ENST00000442679 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.47
USP1-203ENST00000442679 SPATA31E1Q6ZUB1 1445 aa18.01■□□□□ 0.47
USP1-203ENST00000442679 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
USP1-203ENST00000442679 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
USP1-203ENST00000442679 DHX57Q6P158 1386 aaKnown RBP17.99■□□□□ 0.47
USP1-203ENST00000442679 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
USP1-203ENST00000442679 TBX22Q9Y458 520 aa17.96■□□□□ 0.47
USP1-203ENST00000442679 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
USP1-203ENST00000442679 CERKQ8TCT0 537 aa17.93■□□□□ 0.46
USP1-203ENST00000442679 LTBP4Q8N2S1 1624 aa17.92■□□□□ 0.46
USP1-203ENST00000442679 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
USP1-203ENST00000442679 ADGRF5Q8IZF2 1346 aa17.92■□□□□ 0.46
USP1-203ENST00000442679 KCNA6P17658 529 aa17.91■□□□□ 0.46
USP1-203ENST00000442679 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
USP1-203ENST00000442679 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.45
USP1-203ENST00000442679 DCAF11Q8TEB1 546 aa17.89■□□□□ 0.45
USP1-203ENST00000442679 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
USP1-203ENST00000442679 PPLO60437 1756 aa17.89■□□□□ 0.45
USP1-203ENST00000442679 DIP2AQ14689 1571 aa17.87■□□□□ 0.45
USP1-203ENST00000442679 CPS1P31327 1500 aa17.87■□□□□ 0.45
USP1-203ENST00000442679 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
USP1-203ENST00000442679 PIK3R4Q99570 1358 aa17.86■□□□□ 0.45
USP1-203ENST00000442679 NRXN3Q9Y4C0 1643 aa17.86■□□□□ 0.45
USP1-203ENST00000442679 METP08581 1390 aa17.85■□□□□ 0.45
USP1-203ENST00000442679 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
USP1-203ENST00000442679 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
USP1-203ENST00000442679 PROSER2Q86WR7 435 aaPredicted RBP17.84■□□□□ 0.45
USP1-203ENST00000442679 MYOM2P54296 1465 aa17.83■□□□□ 0.45
USP1-203ENST00000442679 STRCP1A6NGW2 1772 aa17.83■□□□□ 0.44
USP1-203ENST00000442679 ALKQ9UM73 1620 aa17.83■□□□□ 0.44
USP1-203ENST00000442679 PIK3C2GO75747 1445 aa17.82■□□□□ 0.44
USP1-203ENST00000442679 PTPRUQ92729 1446 aa17.82■□□□□ 0.44
USP1-203ENST00000442679 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
USP1-203ENST00000442679 C14orf93Q9H972 538 aaKnown RBP17.82■□□□□ 0.44
USP1-203ENST00000442679 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
USP1-203ENST00000442679 NRXN1Q9ULB1 1477 aa17.82■□□□□ 0.44
USP1-203ENST00000442679 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
USP1-203ENST00000442679 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
USP1-203ENST00000442679 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
USP1-203ENST00000442679 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
USP1-203ENST00000442679 TMEM132EQ6IEE7 984 aa17.79■□□□□ 0.44
USP1-203ENST00000442679 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
USP1-203ENST00000442679 TMEM94Q12767 1356 aa17.79■□□□□ 0.44
USP1-203ENST00000442679 NKTRP30414 1462 aaKnown RBP17.78■□□□□ 0.44
USP1-203ENST00000442679 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
USP1-203ENST00000442679 FBXO41Q8TF61 875 aa17.76■□□□□ 0.43
USP1-203ENST00000442679 STK26Q9P289 416 aa17.76■□□□□ 0.43
USP1-203ENST00000442679 UBAP1LF5GYI3 381 aa17.75■□□□□ 0.43
USP1-203ENST00000442679 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
USP1-203ENST00000442679 CLSPNQ9HAW4 1339 aa17.74■□□□□ 0.43
USP1-203ENST00000442679 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
USP1-203ENST00000442679 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
USP1-203ENST00000442679 LRPPRCP42704 1394 aaKnown RBP17.73■□□□□ 0.43
USP1-203ENST00000442679 TOM1O60784 492 aa17.72■□□□□ 0.43
USP1-203ENST00000442679 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
USP1-203ENST00000442679 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
USP1-203ENST00000442679 NCOA3Q9Y6Q9 1424 aa17.72■□□□□ 0.43
USP1-203ENST00000442679 ABCC11Q96J66 1382 aa17.71■□□□□ 0.43
USP1-203ENST00000442679 ROBO2Q9HCK4 1378 aa17.71■□□□□ 0.43
USP1-203ENST00000442679 ASXL1Q8IXJ9 1541 aa17.71■□□□□ 0.43
USP1-203ENST00000442679 YTHDC2Q9H6S0 1430 aaKnown RBP17.71■□□□□ 0.43
USP1-203ENST00000442679 LAMC1P11047 1609 aa17.69■□□□□ 0.42
USP1-203ENST00000442679 MSH6P52701 1360 aa17.69■□□□□ 0.42
USP1-203ENST00000442679 C19orf44Q9H6X5 657 aa17.69■□□□□ 0.42
USP1-203ENST00000442679 PTCH1Q13635 1447 aa17.69■□□□□ 0.42
USP1-203ENST00000442679 ILDR1Q86SU0 546 aaPredicted RBP17.68■□□□□ 0.42
USP1-203ENST00000442679 PIP4K2BP78356 416 aa17.67■□□□□ 0.42
USP1-203ENST00000442679 NBPF1Q3BBV0 1214 aa17.67■□□□□ 0.42
USP1-203ENST00000442679 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
USP1-203ENST00000442679 SIRT1Q96EB6 747 aa17.67■□□□□ 0.42
USP1-203ENST00000442679 XIRP1Q702N8 1843 aaKnown RBP17.67■□□□□ 0.42
USP1-203ENST00000442679 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
USP1-203ENST00000442679 TECPR2O15040 1411 aa17.66■□□□□ 0.42
USP1-203ENST00000442679 TRAK1Q9UPV9 953 aa17.66■□□□□ 0.42
USP1-203ENST00000442679 ATF3P18847 181 aa17.65■□□□□ 0.42
USP1-203ENST00000442679 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
USP1-203ENST00000442679 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
USP1-203ENST00000442679 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
USP1-203ENST00000442679 CADPS2Q86UW7 1296 aa17.63■□□□□ 0.41
USP1-203ENST00000442679 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
USP1-203ENST00000442679 POGKQ9P215 609 aa17.63■□□□□ 0.41
USP1-203ENST00000442679 PLEKHH1Q9ULM0 1364 aa17.63■□□□□ 0.41
USP1-203ENST00000442679 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
USP1-203ENST00000442679 SLAIN2Q9P270 581 aa17.62■□□□□ 0.41
USP1-203ENST00000442679 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
USP1-203ENST00000442679 SAFB2Q14151 953 aaKnown RBP eCLIP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms