RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 IQGAP1P46940 1657 aa23.68■■□□□ 1.38
TRAPPC12-209ENST00000441099 HRCP23327 699 aa23.68■■□□□ 1.38
TRAPPC12-209ENST00000441099 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
TRAPPC12-209ENST00000441099 PLEKHG1Q9ULL1 1385 aa23.66■■□□□ 1.38
TRAPPC12-209ENST00000441099 NUTM2DQ5VT03 806 aaPredicted RBP23.66■■□□□ 1.38
TRAPPC12-209ENST00000441099 SLC26A8Q96RN1 970 aa23.66■■□□□ 1.38
TRAPPC12-209ENST00000441099 IQSEC2Q5JU85 1478 aa23.64■■□□□ 1.38
TRAPPC12-209ENST00000441099 SPHKAPQ2M3C7 1700 aa23.64■■□□□ 1.37
TRAPPC12-209ENST00000441099 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
TRAPPC12-209ENST00000441099 BCANQ96GW7 911 aa23.63■■□□□ 1.37
TRAPPC12-209ENST00000441099 CPS1P31327 1500 aa23.63■■□□□ 1.37
TRAPPC12-209ENST00000441099 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
TRAPPC12-209ENST00000441099 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC12-209ENST00000441099 KCNA6P17658 529 aa23.58■■□□□ 1.37
TRAPPC12-209ENST00000441099 TBX22Q9Y458 520 aa23.58■■□□□ 1.37
TRAPPC12-209ENST00000441099 CCDC144AA2RUR9 1427 aa23.56■■□□□ 1.36
TRAPPC12-209ENST00000441099 ADAMTS13Q76LX8 1427 aa23.56■■□□□ 1.36
TRAPPC12-209ENST00000441099 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
TRAPPC12-209ENST00000441099 RPGRIP1LQ68CZ1 1315 aa23.54■■□□□ 1.36
TRAPPC12-209ENST00000441099 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
TRAPPC12-209ENST00000441099 UBAP1LF5GYI3 381 aa23.51■■□□□ 1.35
TRAPPC12-209ENST00000441099 NEXMIFQ5QGS0 1516 aa23.5■■□□□ 1.35
TRAPPC12-209ENST00000441099 VGFO15240 615 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC12-209ENST00000441099 SPATA31E1Q6ZUB1 1445 aa23.5■■□□□ 1.35
TRAPPC12-209ENST00000441099 ANKRD30BQ9BXX2 1392 aa23.49■■□□□ 1.35
TRAPPC12-209ENST00000441099 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
TRAPPC12-209ENST00000441099 STRCP1A6NGW2 1772 aa23.47■■□□□ 1.35
TRAPPC12-209ENST00000441099 PIK3R4Q99570 1358 aa23.47■■□□□ 1.35
TRAPPC12-209ENST00000441099 PROSER2Q86WR7 435 aaPredicted RBP23.46■■□□□ 1.35
TRAPPC12-209ENST00000441099 TMEM94Q12767 1356 aa23.45■■□□□ 1.34
TRAPPC12-209ENST00000441099 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
TRAPPC12-209ENST00000441099 TOM1O60784 492 aa23.44■■□□□ 1.34
TRAPPC12-209ENST00000441099 DIP2AQ14689 1571 aa23.44■■□□□ 1.34
TRAPPC12-209ENST00000441099 RBM33Q96EV2 1170 aaKnown RBP23.43■■□□□ 1.34
TRAPPC12-209ENST00000441099 NWD1Q149M9 1564 aa23.43■■□□□ 1.34
TRAPPC12-209ENST00000441099 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
TRAPPC12-209ENST00000441099 PTPRUQ92729 1446 aa23.42■■□□□ 1.34
TRAPPC12-209ENST00000441099 METP08581 1390 aa23.42■■□□□ 1.34
TRAPPC12-209ENST00000441099 AMOTL2Q9Y2J4 779 aa23.42■■□□□ 1.34
TRAPPC12-209ENST00000441099 ADGRF5Q8IZF2 1346 aa23.4■■□□□ 1.34
TRAPPC12-209ENST00000441099 TRIM26Q12899 539 aaPredicted RBP23.4■■□□□ 1.34
TRAPPC12-209ENST00000441099 KIF1BO60333 1816 aa23.39■■□□□ 1.33
TRAPPC12-209ENST00000441099 NRXN3Q9Y4C0 1643 aa23.39■■□□□ 1.33
TRAPPC12-209ENST00000441099 PIP4K2BP78356 416 aa23.38■■□□□ 1.33
TRAPPC12-209ENST00000441099 ALKQ9UM73 1620 aa23.36■■□□□ 1.33
TRAPPC12-209ENST00000441099 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
TRAPPC12-209ENST00000441099 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.33
TRAPPC12-209ENST00000441099 CHD2O14647 1828 aaKnown RBP23.3■■□□□ 1.32
TRAPPC12-209ENST00000441099 MSH6P52701 1360 aa23.29■■□□□ 1.32
TRAPPC12-209ENST00000441099 PIK3C2GO75747 1445 aa23.28■■□□□ 1.32
TRAPPC12-209ENST00000441099 PPLO60437 1756 aa23.27■■□□□ 1.32
TRAPPC12-209ENST00000441099 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
TRAPPC12-209ENST00000441099 NRXN1Q9ULB1 1477 aa23.26■■□□□ 1.31
TRAPPC12-209ENST00000441099 MYOM2P54296 1465 aa23.25■■□□□ 1.31
TRAPPC12-209ENST00000441099 HSPA1LP34931 641 aa23.25■■□□□ 1.31
TRAPPC12-209ENST00000441099 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
TRAPPC12-209ENST00000441099 DHX57Q6P158 1386 aaKnown RBP23.25■■□□□ 1.31
TRAPPC12-209ENST00000441099 XRN1Q8IZH2 1706 aaKnown RBP23.25■■□□□ 1.31
TRAPPC12-209ENST00000441099 XIRP1Q702N8 1843 aaKnown RBP23.24■■□□□ 1.31
TRAPPC12-209ENST00000441099 DCAF11Q8TEB1 546 aa23.24■■□□□ 1.31
TRAPPC12-209ENST00000441099 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
TRAPPC12-209ENST00000441099 ROBO2Q9HCK4 1378 aa23.24■■□□□ 1.31
TRAPPC12-209ENST00000441099 PRAG1Q86YV5 1406 aa23.23■■□□□ 1.31
TRAPPC12-209ENST00000441099 CFAP70Q5T0N1 1121 aa23.22■■□□□ 1.31
TRAPPC12-209ENST00000441099 TMEM132EQ6IEE7 984 aa23.22■■□□□ 1.31
TRAPPC12-209ENST00000441099 STAC3Q96MF2 364 aa23.22■■□□□ 1.31
TRAPPC12-209ENST00000441099 SLAIN2Q9P270 581 aa23.22■■□□□ 1.31
TRAPPC12-209ENST00000441099 PTCH1Q13635 1447 aa23.22■■□□□ 1.31
TRAPPC12-209ENST00000441099 FAM135BQ49AJ0 1406 aa23.22■■□□□ 1.31
TRAPPC12-209ENST00000441099 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
TRAPPC12-209ENST00000441099 CADPS2Q86UW7 1296 aa23.2■■□□□ 1.3
TRAPPC12-209ENST00000441099 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
TRAPPC12-209ENST00000441099 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
TRAPPC12-209ENST00000441099 LRPPRCP42704 1394 aaKnown RBP23.19■■□□□ 1.3
TRAPPC12-209ENST00000441099 ATF3P18847 181 aa23.19■■□□□ 1.3
TRAPPC12-209ENST00000441099 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
TRAPPC12-209ENST00000441099 STK26Q9P289 416 aa23.17■■□□□ 1.3
TRAPPC12-209ENST00000441099 ASXL1Q8IXJ9 1541 aa23.17■■□□□ 1.3
TRAPPC12-209ENST00000441099 TECPR2O15040 1411 aa23.16■■□□□ 1.3
TRAPPC12-209ENST00000441099 DCCP43146 1447 aa23.16■■□□□ 1.3
TRAPPC12-209ENST00000441099 SIN3AQ96ST3 1273 aa23.15■■□□□ 1.3
TRAPPC12-209ENST00000441099 ADGRL3Q9HAR2 1447 aa23.15■■□□□ 1.3
TRAPPC12-209ENST00000441099 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.29
TRAPPC12-209ENST00000441099 WAPLQ7Z5K2 1190 aa23.12■■□□□ 1.29
TRAPPC12-209ENST00000441099 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
TRAPPC12-209ENST00000441099 PLEKHH1Q9ULM0 1364 aa23.09■■□□□ 1.29
TRAPPC12-209ENST00000441099 NEUROD1Q13562 356 aa23.08■■□□□ 1.29
TRAPPC12-209ENST00000441099 L3MBTL2Q969R5 705 aa23.08■■□□□ 1.29
TRAPPC12-209ENST00000441099 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.08■■□□□ 1.28
TRAPPC12-209ENST00000441099 MST1RQ04912 1400 aa23.08■■□□□ 1.28
TRAPPC12-209ENST00000441099 BRINP3Q76B58 766 aa23.07■■□□□ 1.28
TRAPPC12-209ENST00000441099 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
TRAPPC12-209ENST00000441099 ROBO1Q9Y6N7 1651 aa23.03■■□□□ 1.28
TRAPPC12-209ENST00000441099 PRAM1Q96QH2 718 aa23.02■■□□□ 1.28
TRAPPC12-209ENST00000441099 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
TRAPPC12-209ENST00000441099 TRAK1Q9UPV9 953 aa23.02■■□□□ 1.28
TRAPPC12-209ENST00000441099 LAMC1P11047 1609 aa23.01■■□□□ 1.27
TRAPPC12-209ENST00000441099 C1orf167Q5SNV9 1468 aa23.01■■□□□ 1.27
TRAPPC12-209ENST00000441099 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
TRAPPC12-209ENST00000441099 DLC1Q96QB1 1528 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms