RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 RIMS2Q9UQ26 1411 aa28.74■■■□□ 2.19
SEMA3B-206ENST00000439487 ZFYVE9O95405 1425 aa28.72■■■□□ 2.19
SEMA3B-206ENST00000439487 CCDC144AA2RUR9 1427 aa28.69■■■□□ 2.18
SEMA3B-206ENST00000439487 ZNF326Q5BKZ1 582 aaKnown RBP28.69■■■□□ 2.18
SEMA3B-206ENST00000439487 NUTM2DQ5VT03 806 aaPredicted RBP28.68■■■□□ 2.18
SEMA3B-206ENST00000439487 HDGFP51858 240 aaKnown RBP28.67■■■□□ 2.18
SEMA3B-206ENST00000439487 PPP1R15AO75807 674 aaPredicted RBP28.65■■■□□ 2.18
SEMA3B-206ENST00000439487 SENP3Q9H4L4 574 aaPredicted RBP28.65■■■□□ 2.18
SEMA3B-206ENST00000439487 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.64■■■□□ 2.18
SEMA3B-206ENST00000439487 ZNF335Q9H4Z2 1342 aaPredicted RBP28.64■■■□□ 2.17
SEMA3B-206ENST00000439487 ANKRD30BQ9BXX2 1392 aa28.62■■■□□ 2.17
SEMA3B-206ENST00000439487 NEXMIFQ5QGS0 1516 aa28.61■■■□□ 2.17
SEMA3B-206ENST00000439487 BCANQ96GW7 911 aa28.61■■■□□ 2.17
SEMA3B-206ENST00000439487 PLEKHG1Q9ULL1 1385 aa28.6■■■□□ 2.17
SEMA3B-206ENST00000439487 LTBP4Q8N2S1 1624 aa28.59■■■□□ 2.17
SEMA3B-206ENST00000439487 PPLO60437 1756 aa28.58■■■□□ 2.17
SEMA3B-206ENST00000439487 SLC26A8Q96RN1 970 aa28.57■■■□□ 2.16
SEMA3B-206ENST00000439487 STRCP1A6NGW2 1772 aa28.56■■■□□ 2.16
SEMA3B-206ENST00000439487 RGL3Q3MIN7 710 aa28.56■■■□□ 2.16
SEMA3B-206ENST00000439487 SPATA31E1Q6ZUB1 1445 aa28.56■■■□□ 2.16
SEMA3B-206ENST00000439487 ILDR2Q71H61 639 aa28.55■■■□□ 2.16
SEMA3B-206ENST00000439487 PCGF6Q9BYE7 350 aa28.54■■■□□ 2.16
SEMA3B-206ENST00000439487 RPGRIP1LQ68CZ1 1315 aa28.53■■■□□ 2.16
SEMA3B-206ENST00000439487 IFT172Q9UG01 1749 aa28.52■■■□□ 2.16
SEMA3B-206ENST00000439487 CERKQ8TCT0 537 aa28.52■■■□□ 2.16
SEMA3B-206ENST00000439487 NRXN3Q9Y4C0 1643 aa28.49■■■□□ 2.15
SEMA3B-206ENST00000439487 ADAMTS13Q76LX8 1427 aa28.49■■■□□ 2.15
SEMA3B-206ENST00000439487 VGFO15240 615 aaPredicted RBP28.47■■■□□ 2.15
SEMA3B-206ENST00000439487 DHX57Q6P158 1386 aaKnown RBP28.47■■■□□ 2.15
SEMA3B-206ENST00000439487 CHD2O14647 1828 aaKnown RBP28.46■■■□□ 2.15
SEMA3B-206ENST00000439487 SOCS7O14512 581 aa28.46■■■□□ 2.15
SEMA3B-206ENST00000439487 SETBP1Q9Y6X0 1596 aa28.45■■■□□ 2.15
SEMA3B-206ENST00000439487 TBX22Q9Y458 520 aa28.45■■■□□ 2.14
SEMA3B-206ENST00000439487 DIP2AQ14689 1571 aa28.45■■■□□ 2.14
SEMA3B-206ENST00000439487 CPS1P31327 1500 aa28.44■■■□□ 2.14
SEMA3B-206ENST00000439487 ADGRF5Q8IZF2 1346 aa28.41■■■□□ 2.14
SEMA3B-206ENST00000439487 KCNA6P17658 529 aa28.4■■■□□ 2.14
SEMA3B-206ENST00000439487 DISP3Q9P2K9 1392 aa28.38■■■□□ 2.13
SEMA3B-206ENST00000439487 NWD1Q149M9 1564 aa28.37■■■□□ 2.13
SEMA3B-206ENST00000439487 SETD1AO15047 1707 aaKnown RBP28.37■■■□□ 2.13
SEMA3B-206ENST00000439487 XIRP1Q702N8 1843 aaKnown RBP28.36■■■□□ 2.13
SEMA3B-206ENST00000439487 LRRC7Q96NW7 1537 aa28.35■■■□□ 2.13
SEMA3B-206ENST00000439487 SIN3AQ96ST3 1273 aa28.35■■■□□ 2.13
SEMA3B-206ENST00000439487 ALKQ9UM73 1620 aa28.35■■■□□ 2.13
SEMA3B-206ENST00000439487 PIK3R4Q99570 1358 aa28.34■■■□□ 2.13
SEMA3B-206ENST00000439487 IQSEC2Q5JU85 1478 aa28.34■■■□□ 2.13
SEMA3B-206ENST00000439487 METP08581 1390 aa28.33■■■□□ 2.13
SEMA3B-206ENST00000439487 PTPRUQ92729 1446 aa28.32■■■□□ 2.12
SEMA3B-206ENST00000439487 DCAF11Q8TEB1 546 aa28.31■■■□□ 2.12
SEMA3B-206ENST00000439487 KDM2AQ9Y2K7 1162 aa28.31■■■□□ 2.12
SEMA3B-206ENST00000439487 MYOM2P54296 1465 aa28.31■■■□□ 2.12
SEMA3B-206ENST00000439487 NEUROD1Q13562 356 aa28.29■■■□□ 2.12
SEMA3B-206ENST00000439487 PROSER2Q86WR7 435 aaPredicted RBP28.29■■■□□ 2.12
SEMA3B-206ENST00000439487 AMOTL2Q9Y2J4 779 aa28.29■■■□□ 2.12
SEMA3B-206ENST00000439487 NKTRP30414 1462 aaKnown RBP28.28■■■□□ 2.12
SEMA3B-206ENST00000439487 PIK3C2GO75747 1445 aa28.28■■■□□ 2.12
SEMA3B-206ENST00000439487 NRXN1Q9ULB1 1477 aa28.27■■■□□ 2.12
SEMA3B-206ENST00000439487 RBM33Q96EV2 1170 aaKnown RBP28.27■■■□□ 2.12
SEMA3B-206ENST00000439487 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.12
SEMA3B-206ENST00000439487 TMEM94Q12767 1356 aa28.24■■■□□ 2.11
SEMA3B-206ENST00000439487 CFAP70Q5T0N1 1121 aa28.2■■■□□ 2.1
SEMA3B-206ENST00000439487 STAC3Q96MF2 364 aa28.2■■■□□ 2.1
SEMA3B-206ENST00000439487 C14orf93Q9H972 538 aaKnown RBP28.2■■■□□ 2.1
SEMA3B-206ENST00000439487 LAMC1P11047 1609 aa28.19■■■□□ 2.1
SEMA3B-206ENST00000439487 UBAP1LF5GYI3 381 aa28.19■■■□□ 2.1
SEMA3B-206ENST00000439487 ASXL1Q8IXJ9 1541 aa28.18■■■□□ 2.1
SEMA3B-206ENST00000439487 TMEM132EQ6IEE7 984 aa28.18■■■□□ 2.1
SEMA3B-206ENST00000439487 L3MBTL2Q969R5 705 aa28.17■■■□□ 2.1
SEMA3B-206ENST00000439487 STK26Q9P289 416 aa28.13■■■□□ 2.09
SEMA3B-206ENST00000439487 TOM1O60784 492 aa28.12■■■□□ 2.09
SEMA3B-206ENST00000439487 KNDC1Q76NI1 1749 aa28.1■■■□□ 2.09
SEMA3B-206ENST00000439487 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
SEMA3B-206ENST00000439487 LRPPRCP42704 1394 aaKnown RBP28.1■■■□□ 2.09
SEMA3B-206ENST00000439487 ROBO2Q9HCK4 1378 aa28.1■■■□□ 2.09
SEMA3B-206ENST00000439487 NCOA3Q9Y6Q9 1424 aa28.09■■■□□ 2.09
SEMA3B-206ENST00000439487 MSH6P52701 1360 aa28.09■■■□□ 2.09
SEMA3B-206ENST00000439487 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.09■■■□□ 2.09
SEMA3B-206ENST00000439487 PTCH1Q13635 1447 aa28.09■■■□□ 2.09
SEMA3B-206ENST00000439487 YTHDC2Q9H6S0 1430 aaKnown RBP28.09■■■□□ 2.09
SEMA3B-206ENST00000439487 PRAG1Q86YV5 1406 aa28.07■■■□□ 2.08
SEMA3B-206ENST00000439487 KIAA1210Q9ULL0 1709 aa28.06■■■□□ 2.08
SEMA3B-206ENST00000439487 ADGRB1O14514 1584 aa28.06■■■□□ 2.08
SEMA3B-206ENST00000439487 PIP4K2BP78356 416 aa28.05■■■□□ 2.08
SEMA3B-206ENST00000439487 ABCC11Q96J66 1382 aa28.05■■■□□ 2.08
SEMA3B-206ENST00000439487 NALCNQ8IZF0 1738 aa28.04■■■□□ 2.08
SEMA3B-206ENST00000439487 TECPR2O15040 1411 aa28.04■■■□□ 2.08
SEMA3B-206ENST00000439487 TONSLQ96HA7 1378 aa28.04■■■□□ 2.08
SEMA3B-206ENST00000439487 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
SEMA3B-206ENST00000439487 C19orf44Q9H6X5 657 aa28.02■■■□□ 2.08
SEMA3B-206ENST00000439487 WAPLQ7Z5K2 1190 aa28.01■■■□□ 2.07
SEMA3B-206ENST00000439487 CCER1Q8TC90 406 aaPredicted RBP28.01■■■□□ 2.07
SEMA3B-206ENST00000439487 ADGRL3Q9HAR2 1447 aa27.99■■■□□ 2.07
SEMA3B-206ENST00000439487 CLSPNQ9HAW4 1339 aa27.98■■■□□ 2.07
SEMA3B-206ENST00000439487 NBPF1Q3BBV0 1214 aa27.98■■■□□ 2.07
SEMA3B-206ENST00000439487 PLEKHH1Q9ULM0 1364 aa27.98■■■□□ 2.07
SEMA3B-206ENST00000439487 ATF3P18847 181 aa27.97■■■□□ 2.07
SEMA3B-206ENST00000439487 TRAK1Q9UPV9 953 aa27.97■■■□□ 2.07
SEMA3B-206ENST00000439487 TRPM1Q7Z4N2 1603 aa27.96■■■□□ 2.07
SEMA3B-206ENST00000439487 CADPS2Q86UW7 1296 aa27.95■■■□□ 2.06
SEMA3B-206ENST00000439487 SIRT1Q96EB6 747 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms