RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 CERKQ8TCT0 537 aa13.03□□□□□ -0.32
HERPUD2-206ENST00000438224 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
HERPUD2-206ENST00000438224 MED14O60244 1454 aa13.03□□□□□ -0.32
HERPUD2-206ENST00000438224 SLIT1O75093 1534 aa13.03□□□□□ -0.32
HERPUD2-206ENST00000438224 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
HERPUD2-206ENST00000438224 ADGRB3O60242 1522 aa13.02□□□□□ -0.33
HERPUD2-206ENST00000438224 THEMISQ8N1K5 641 aaPredicted RBP13.01□□□□□ -0.33
HERPUD2-206ENST00000438224 FBXO41Q8TF61 875 aa13.01□□□□□ -0.33
HERPUD2-206ENST00000438224 SPHKAPQ2M3C7 1700 aa13□□□□□ -0.33
HERPUD2-206ENST00000438224 NPHP4O75161 1426 aaPredicted RBP13□□□□□ -0.33
HERPUD2-206ENST00000438224 IDI1Q13907 227 aa13□□□□□ -0.33
HERPUD2-206ENST00000438224 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
HERPUD2-206ENST00000438224 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
HERPUD2-206ENST00000438224 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
HERPUD2-206ENST00000438224 NUP155O75694 1391 aa12.99□□□□□ -0.33
HERPUD2-206ENST00000438224 LTKP29376 864 aa12.98□□□□□ -0.33
HERPUD2-206ENST00000438224 ANKLE2Q86XL3 938 aa12.98□□□□□ -0.33
HERPUD2-206ENST00000438224 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
HERPUD2-206ENST00000438224 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
HERPUD2-206ENST00000438224 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
HERPUD2-206ENST00000438224 CLTCL1P53675 1640 aa12.93□□□□□ -0.34
HERPUD2-206ENST00000438224 SLC52A1Q9NWF4 448 aa12.93□□□□□ -0.34
HERPUD2-206ENST00000438224 ZFYVE9O95405 1425 aa12.93□□□□□ -0.34
HERPUD2-206ENST00000438224 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
HERPUD2-206ENST00000438224 CPS1P31327 1500 aa12.91□□□□□ -0.34
HERPUD2-206ENST00000438224 TRPM2O94759 1503 aa12.9□□□□□ -0.34
HERPUD2-206ENST00000438224 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
HERPUD2-206ENST00000438224 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
HERPUD2-206ENST00000438224 KIF1BO60333 1816 aa12.9□□□□□ -0.34
HERPUD2-206ENST00000438224 RIMS2Q9UQ26 1411 aa12.89□□□□□ -0.35
HERPUD2-206ENST00000438224 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
HERPUD2-206ENST00000438224 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
HERPUD2-206ENST00000438224 EID1Q9Y6B2 187 aa12.87□□□□□ -0.35
HERPUD2-206ENST00000438224 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
HERPUD2-206ENST00000438224 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
HERPUD2-206ENST00000438224 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
HERPUD2-206ENST00000438224 TRIM52Q96A61 297 aa12.85□□□□□ -0.35
HERPUD2-206ENST00000438224 BCANQ96GW7 911 aa12.85□□□□□ -0.35
HERPUD2-206ENST00000438224 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
HERPUD2-206ENST00000438224 HAP1P54257 671 aaPredicted RBP12.84□□□□□ -0.35
HERPUD2-206ENST00000438224 NUTM2DQ5VT03 806 aaPredicted RBP12.84□□□□□ -0.35
HERPUD2-206ENST00000438224 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
HERPUD2-206ENST00000438224 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.35
HERPUD2-206ENST00000438224 ADAMTS13Q76LX8 1427 aa12.83□□□□□ -0.36
HERPUD2-206ENST00000438224 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
HERPUD2-206ENST00000438224 PPLO60437 1756 aa12.81□□□□□ -0.36
HERPUD2-206ENST00000438224 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
HERPUD2-206ENST00000438224 DIP2AQ14689 1571 aa12.81□□□□□ -0.36
HERPUD2-206ENST00000438224 SETD1AO15047 1707 aaKnown RBP12.8□□□□□ -0.36
HERPUD2-206ENST00000438224 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
HERPUD2-206ENST00000438224 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
HERPUD2-206ENST00000438224 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
HERPUD2-206ENST00000438224 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
HERPUD2-206ENST00000438224 PPP1R15AO75807 674 aaPredicted RBP12.78□□□□□ -0.36
HERPUD2-206ENST00000438224 KCNA6P17658 529 aa12.78□□□□□ -0.36
HERPUD2-206ENST00000438224 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
HERPUD2-206ENST00000438224 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
HERPUD2-206ENST00000438224 XRN1Q8IZH2 1706 aaKnown RBP12.78□□□□□ -0.36
HERPUD2-206ENST00000438224 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.77□□□□□ -0.37
HERPUD2-206ENST00000438224 MPHOSPH9Q99550 1183 aa12.77□□□□□ -0.37
HERPUD2-206ENST00000438224 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
HERPUD2-206ENST00000438224 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
HERPUD2-206ENST00000438224 TMEM94Q12767 1356 aa12.76□□□□□ -0.37
HERPUD2-206ENST00000438224 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
HERPUD2-206ENST00000438224 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
HERPUD2-206ENST00000438224 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
HERPUD2-206ENST00000438224 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
HERPUD2-206ENST00000438224 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
HERPUD2-206ENST00000438224 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
HERPUD2-206ENST00000438224 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
HERPUD2-206ENST00000438224 METP08581 1390 aa12.72□□□□□ -0.37
HERPUD2-206ENST00000438224 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
HERPUD2-206ENST00000438224 TOM1O60784 492 aa12.72□□□□□ -0.37
HERPUD2-206ENST00000438224 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
HERPUD2-206ENST00000438224 PIK3R4Q99570 1358 aa12.71□□□□□ -0.37
HERPUD2-206ENST00000438224 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.37
HERPUD2-206ENST00000438224 HSPA1LP34931 641 aa12.7□□□□□ -0.38
HERPUD2-206ENST00000438224 ROBO1Q9Y6N7 1651 aa12.7□□□□□ -0.38
HERPUD2-206ENST00000438224 NALCNQ8IZF0 1738 aa12.69□□□□□ -0.38
HERPUD2-206ENST00000438224 ASXL1Q8IXJ9 1541 aa12.68□□□□□ -0.38
HERPUD2-206ENST00000438224 VSIG10Q8N0Z9 540 aa12.67□□□□□ -0.38
HERPUD2-206ENST00000438224 AMOTL2Q9Y2J4 779 aa12.67□□□□□ -0.38
HERPUD2-206ENST00000438224 ANKRD30BQ9BXX2 1392 aa12.67□□□□□ -0.38
HERPUD2-206ENST00000438224 RPGRIP1LQ68CZ1 1315 aa12.66□□□□□ -0.38
HERPUD2-206ENST00000438224 ADGRF5Q8IZF2 1346 aa12.66□□□□□ -0.38
HERPUD2-206ENST00000438224 RGL3Q3MIN7 710 aa12.66□□□□□ -0.38
HERPUD2-206ENST00000438224 ACIN1Q9UKV3 1341 aaKnown RBP12.65□□□□□ -0.38
HERPUD2-206ENST00000438224 SAMD1Q6SPF0 538 aaPredicted RBP12.65□□□□□ -0.38
HERPUD2-206ENST00000438224 MSH6P52701 1360 aa12.65□□□□□ -0.38
HERPUD2-206ENST00000438224 NCOA3Q9Y6Q9 1424 aa12.64□□□□□ -0.39
HERPUD2-206ENST00000438224 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
HERPUD2-206ENST00000438224 HRCP23327 699 aa12.64□□□□□ -0.39
HERPUD2-206ENST00000438224 PIK3C2GO75747 1445 aa12.63□□□□□ -0.39
HERPUD2-206ENST00000438224 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
HERPUD2-206ENST00000438224 PRAG1Q86YV5 1406 aa12.63□□□□□ -0.39
HERPUD2-206ENST00000438224 NRXN1Q9ULB1 1477 aa12.63□□□□□ -0.39
HERPUD2-206ENST00000438224 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
HERPUD2-206ENST00000438224 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
HERPUD2-206ENST00000438224 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
HERPUD2-206ENST00000438224 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms