RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 NEUROD1Q13562 356 aa16.92■□□□□ 0.3
APTX-208ENST00000436040 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
APTX-208ENST00000436040 CHGAP10645 457 aaKnown RBP16.91■□□□□ 0.3
APTX-208ENST00000436040 NPHP4O75161 1426 aaPredicted RBP16.91■□□□□ 0.3
APTX-208ENST00000436040 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
APTX-208ENST00000436040 CCDC144AA2RUR9 1427 aa16.9■□□□□ 0.3
APTX-208ENST00000436040 LTKP29376 864 aa16.89■□□□□ 0.3
APTX-208ENST00000436040 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.3
APTX-208ENST00000436040 RIMS2Q9UQ26 1411 aa16.89■□□□□ 0.3
APTX-208ENST00000436040 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
APTX-208ENST00000436040 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
APTX-208ENST00000436040 HDGFP51858 240 aaKnown RBP16.87■□□□□ 0.29
APTX-208ENST00000436040 DHX57Q6P158 1386 aaKnown RBP16.86■□□□□ 0.29
APTX-208ENST00000436040 NEXMIFQ5QGS0 1516 aa16.85■□□□□ 0.29
APTX-208ENST00000436040 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.85■□□□□ 0.29
APTX-208ENST00000436040 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
APTX-208ENST00000436040 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
APTX-208ENST00000436040 PPLO60437 1756 aa16.83■□□□□ 0.29
APTX-208ENST00000436040 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.29
APTX-208ENST00000436040 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
APTX-208ENST00000436040 PPP1R15AO75807 674 aaPredicted RBP16.82■□□□□ 0.28
APTX-208ENST00000436040 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
APTX-208ENST00000436040 RPGRIP1LQ68CZ1 1315 aa16.81■□□□□ 0.28
APTX-208ENST00000436040 LTBP4Q8N2S1 1624 aa16.8■□□□□ 0.28
APTX-208ENST00000436040 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
APTX-208ENST00000436040 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
APTX-208ENST00000436040 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
APTX-208ENST00000436040 NUTM2DQ5VT03 806 aaPredicted RBP16.78■□□□□ 0.28
APTX-208ENST00000436040 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
APTX-208ENST00000436040 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
APTX-208ENST00000436040 STRCP1A6NGW2 1772 aa16.76■□□□□ 0.27
APTX-208ENST00000436040 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
APTX-208ENST00000436040 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
APTX-208ENST00000436040 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
APTX-208ENST00000436040 BCANQ96GW7 911 aa16.75■□□□□ 0.27
APTX-208ENST00000436040 CPS1P31327 1500 aa16.75■□□□□ 0.27
APTX-208ENST00000436040 SLC26A8Q96RN1 970 aa16.74■□□□□ 0.27
APTX-208ENST00000436040 SENP3Q9H4L4 574 aaPredicted RBP16.73■□□□□ 0.27
APTX-208ENST00000436040 TBX22Q9Y458 520 aa16.73■□□□□ 0.27
APTX-208ENST00000436040 NWD1Q149M9 1564 aa16.73■□□□□ 0.27
APTX-208ENST00000436040 CHD2O14647 1828 aaKnown RBP16.73■□□□□ 0.27
APTX-208ENST00000436040 MYOM2P54296 1465 aa16.72■□□□□ 0.27
APTX-208ENST00000436040 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
APTX-208ENST00000436040 PIK3R4Q99570 1358 aa16.7■□□□□ 0.26
APTX-208ENST00000436040 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
APTX-208ENST00000436040 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
APTX-208ENST00000436040 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
APTX-208ENST00000436040 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
APTX-208ENST00000436040 KCNA6P17658 529 aa16.68■□□□□ 0.26
APTX-208ENST00000436040 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
APTX-208ENST00000436040 NKTRP30414 1462 aaKnown RBP16.68■□□□□ 0.26
APTX-208ENST00000436040 PIK3C2GO75747 1445 aa16.67■□□□□ 0.26
APTX-208ENST00000436040 ZNF316A6NFI3 1004 aaPredicted RBP16.66■□□□□ 0.26
APTX-208ENST00000436040 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
APTX-208ENST00000436040 LAMC1P11047 1609 aa16.66■□□□□ 0.26
APTX-208ENST00000436040 LRRC7Q96NW7 1537 aa16.66■□□□□ 0.26
APTX-208ENST00000436040 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
APTX-208ENST00000436040 XIRP1Q702N8 1843 aaKnown RBP16.65■□□□□ 0.26
APTX-208ENST00000436040 METP08581 1390 aa16.64■□□□□ 0.26
APTX-208ENST00000436040 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
APTX-208ENST00000436040 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
APTX-208ENST00000436040 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
APTX-208ENST00000436040 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
APTX-208ENST00000436040 AMOTL2Q9Y2J4 779 aa16.6■□□□□ 0.25
APTX-208ENST00000436040 C14orf93Q9H972 538 aaKnown RBP16.59■□□□□ 0.25
APTX-208ENST00000436040 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
APTX-208ENST00000436040 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
APTX-208ENST00000436040 PROSER2Q86WR7 435 aaPredicted RBP16.58■□□□□ 0.24
APTX-208ENST00000436040 KNDC1Q76NI1 1749 aa16.58■□□□□ 0.24
APTX-208ENST00000436040 KIAA1210Q9ULL0 1709 aa16.57■□□□□ 0.24
APTX-208ENST00000436040 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
APTX-208ENST00000436040 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
APTX-208ENST00000436040 NCOA3Q9Y6Q9 1424 aa16.57■□□□□ 0.24
APTX-208ENST00000436040 PTCH1Q13635 1447 aa16.56■□□□□ 0.24
APTX-208ENST00000436040 CFAP70Q5T0N1 1121 aa16.55■□□□□ 0.24
APTX-208ENST00000436040 FBXO41Q8TF61 875 aa16.55■□□□□ 0.24
APTX-208ENST00000436040 LRPPRCP42704 1394 aaKnown RBP16.55■□□□□ 0.24
APTX-208ENST00000436040 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
APTX-208ENST00000436040 TECPR2O15040 1411 aa16.54■□□□□ 0.24
APTX-208ENST00000436040 YTHDC2Q9H6S0 1430 aaKnown RBP16.53■□□□□ 0.24
APTX-208ENST00000436040 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
APTX-208ENST00000436040 TMEM132EQ6IEE7 984 aa16.52■□□□□ 0.24
APTX-208ENST00000436040 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
APTX-208ENST00000436040 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
APTX-208ENST00000436040 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
APTX-208ENST00000436040 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
APTX-208ENST00000436040 MSH6P52701 1360 aa16.5■□□□□ 0.23
APTX-208ENST00000436040 NALCNQ8IZF0 1738 aa16.5■□□□□ 0.23
APTX-208ENST00000436040 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
APTX-208ENST00000436040 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
APTX-208ENST00000436040 DLC1Q96QB1 1528 aa16.49■□□□□ 0.23
APTX-208ENST00000436040 TOM1O60784 492 aa16.49■□□□□ 0.23
APTX-208ENST00000436040 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
APTX-208ENST00000436040 STK26Q9P289 416 aa16.48■□□□□ 0.23
APTX-208ENST00000436040 DCCP43146 1447 aa16.47■□□□□ 0.23
APTX-208ENST00000436040 FAM135BQ49AJ0 1406 aa16.47■□□□□ 0.23
APTX-208ENST00000436040 SIRT1Q96EB6 747 aa16.47■□□□□ 0.23
APTX-208ENST00000436040 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
APTX-208ENST00000436040 C14orf37Q86TY3 774 aa16.47■□□□□ 0.23
APTX-208ENST00000436040 C19orf44Q9H6X5 657 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms