RNA–Protein interactions for RNA: ENST00000433298.5

LRCH3-205, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-205ENST00000433298 MSH6P52701 1360 aa12.2□□□□□ -0.46
LRCH3-205ENST00000433298 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
LRCH3-205ENST00000433298 EID1Q9Y6B2 187 aa12.2□□□□□ -0.46
LRCH3-205ENST00000433298 NCOA2Q15596 1464 aa12.2□□□□□ -0.46
LRCH3-205ENST00000433298 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
LRCH3-205ENST00000433298 KCNA6P17658 529 aa12.18□□□□□ -0.46
LRCH3-205ENST00000433298 BCANQ96GW7 911 aa12.18□□□□□ -0.46
LRCH3-205ENST00000433298 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
LRCH3-205ENST00000433298 CDK12Q9NYV4 1490 aaPredicted RBP12.17□□□□□ -0.46
LRCH3-205ENST00000433298 C8orf37Q96NL8 207 aa12.17□□□□□ -0.46
LRCH3-205ENST00000433298 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
LRCH3-205ENST00000433298 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
LRCH3-205ENST00000433298 MBD5Q9P267 1494 aa12.15□□□□□ -0.46
LRCH3-205ENST00000433298 TIAM1Q13009 1591 aa12.15□□□□□ -0.46
LRCH3-205ENST00000433298 C14orf37Q86TY3 774 aa12.15□□□□□ -0.46
LRCH3-205ENST00000433298 ABCC3O15438 1527 aa12.15□□□□□ -0.46
LRCH3-205ENST00000433298 PRDM15P57071 1507 aaPredicted RBP12.15□□□□□ -0.46
LRCH3-205ENST00000433298 ARHGAP23Q9P227 1491 aa12.14□□□□□ -0.47
LRCH3-205ENST00000433298 RTEL1-TNFRSF6BF6WH68 1400 aa12.14□□□□□ -0.47
LRCH3-205ENST00000433298 SLIT1O75093 1534 aa12.14□□□□□ -0.47
LRCH3-205ENST00000433298 CEP152O94986 1710 aa12.14□□□□□ -0.47
LRCH3-205ENST00000433298 SHPRHQ149N8 1683 aa12.13□□□□□ -0.47
LRCH3-205ENST00000433298 FGD6Q6ZV73 1430 aa12.13□□□□□ -0.47
LRCH3-205ENST00000433298 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
LRCH3-205ENST00000433298 ATAD2Q6PL18 1390 aa12.12□□□□□ -0.47
LRCH3-205ENST00000433298 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
LRCH3-205ENST00000433298 PIK3C2BO00750 1634 aa12.11□□□□□ -0.47
LRCH3-205ENST00000433298 TMEM2Q9UHN6 1383 aa12.1□□□□□ -0.47
LRCH3-205ENST00000433298 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
LRCH3-205ENST00000433298 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
LRCH3-205ENST00000433298 MTUS2Q5JR59 1369 aa12.09□□□□□ -0.47
LRCH3-205ENST00000433298 ADAMTS2O95450 1211 aa12.08□□□□□ -0.48
LRCH3-205ENST00000433298 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.48
LRCH3-205ENST00000433298 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.48
LRCH3-205ENST00000433298 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
LRCH3-205ENST00000433298 AHDC1Q5TGY3 1603 aaPredicted RBP12.07□□□□□ -0.48
LRCH3-205ENST00000433298 NGLY1Q96IV0 654 aa12.06□□□□□ -0.48
LRCH3-205ENST00000433298 TET3O43151 1660 aa12.06□□□□□ -0.48
LRCH3-205ENST00000433298 DIP2AQ14689 1571 aa12.05□□□□□ -0.48
LRCH3-205ENST00000433298 ATF3P18847 181 aa12.05□□□□□ -0.48
LRCH3-205ENST00000433298 DDX17Q92841 729 aaKnown RBP12.05□□□□□ -0.48
LRCH3-205ENST00000433298 CAMSAP2Q08AD1 1489 aa12.04□□□□□ -0.48
LRCH3-205ENST00000433298 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
LRCH3-205ENST00000433298 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
LRCH3-205ENST00000433298 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
LRCH3-205ENST00000433298 BRINP3Q76B58 766 aa12.04□□□□□ -0.48
LRCH3-205ENST00000433298 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
LRCH3-205ENST00000433298 MAST1Q9Y2H9 1570 aa12.04□□□□□ -0.48
LRCH3-205ENST00000433298 EFCAB6Q5THR3 1501 aa12.03□□□□□ -0.48
LRCH3-205ENST00000433298 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
LRCH3-205ENST00000433298 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
LRCH3-205ENST00000433298 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
LRCH3-205ENST00000433298 MROH1Q8NDA8 1641 aa12.03□□□□□ -0.48
LRCH3-205ENST00000433298 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.03□□□□□ -0.48
LRCH3-205ENST00000433298 IDI1Q13907 227 aa12.02□□□□□ -0.49
LRCH3-205ENST00000433298 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
LRCH3-205ENST00000433298 CADPS2Q86UW7 1296 aa12.01□□□□□ -0.49
LRCH3-205ENST00000433298 USP21Q9UK80 565 aa12.01□□□□□ -0.49
LRCH3-205ENST00000433298 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
LRCH3-205ENST00000433298 PPP1R15AO75807 674 aaPredicted RBP11.99□□□□□ -0.49
LRCH3-205ENST00000433298 YY1P25490 414 aa11.98□□□□□ -0.49
LRCH3-205ENST00000433298 C19orf44Q9H6X5 657 aa11.98□□□□□ -0.49
LRCH3-205ENST00000433298 EP400Q96L91 3159 aa11.98□□□□□ -0.49
LRCH3-205ENST00000433298 LRP5O75197 1615 aa11.97□□□□□ -0.49
LRCH3-205ENST00000433298 ASXL1Q8IXJ9 1541 aa11.97□□□□□ -0.49
LRCH3-205ENST00000433298 PNPLA6Q8IY17 1366 aa11.97□□□□□ -0.49
LRCH3-205ENST00000433298 TRPC5Q9UL62 973 aaPredicted RBP11.97□□□□□ -0.49
LRCH3-205ENST00000433298 LRRC59Q96AG4 307 aaKnown RBP11.96□□□□□ -0.49
LRCH3-205ENST00000433298 EIF2AK4Q9P2K8 1649 aaKnown RBP11.96□□□□□ -0.5
LRCH3-205ENST00000433298 EHBP1L1Q8N3D4 1523 aa11.96□□□□□ -0.5
LRCH3-205ENST00000433298 SETD5Q9C0A6 1442 aa11.95□□□□□ -0.5
LRCH3-205ENST00000433298 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
LRCH3-205ENST00000433298 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
LRCH3-205ENST00000433298 CCDC125Q86Z20 511 aa11.95□□□□□ -0.5
LRCH3-205ENST00000433298 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
LRCH3-205ENST00000433298 ADGRB3O60242 1522 aa11.93□□□□□ -0.5
LRCH3-205ENST00000433298 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
LRCH3-205ENST00000433298 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
LRCH3-205ENST00000433298 MYO5BQ9ULV0 1848 aa11.93□□□□□ -0.5
LRCH3-205ENST00000433298 HRCP23327 699 aa11.92□□□□□ -0.5
LRCH3-205ENST00000433298 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
LRCH3-205ENST00000433298 ATRNO75882 1429 aa11.92□□□□□ -0.5
LRCH3-205ENST00000433298 CEP162Q5TB80 1403 aa11.92□□□□□ -0.5
LRCH3-205ENST00000433298 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
LRCH3-205ENST00000433298 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
LRCH3-205ENST00000433298 PLEKHG1Q9ULL1 1385 aa11.91□□□□□ -0.5
LRCH3-205ENST00000433298 BLMP54132 1417 aaPredicted RBP11.9□□□□□ -0.5
LRCH3-205ENST00000433298 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
LRCH3-205ENST00000433298 RRP7BPQ9NSQ0 103 aa11.9□□□□□ -0.5
LRCH3-205ENST00000433298 RIMS2Q9UQ26 1411 aa11.9□□□□□ -0.5
LRCH3-205ENST00000433298 NCOA3Q9Y6Q9 1424 aa11.9□□□□□ -0.5
LRCH3-205ENST00000433298 PITPNM1O00562 1244 aa11.89□□□□□ -0.51
LRCH3-205ENST00000433298 AMOTL2Q9Y2J4 779 aa11.89□□□□□ -0.51
LRCH3-205ENST00000433298 MST1RQ04912 1400 aa11.88□□□□□ -0.51
LRCH3-205ENST00000433298 DUOX2Q9NRD8 1548 aa11.88□□□□□ -0.51
LRCH3-205ENST00000433298 TBX22Q9Y458 520 aa11.88□□□□□ -0.51
LRCH3-205ENST00000433298 ZFYVE9O95405 1425 aa11.87□□□□□ -0.51
LRCH3-205ENST00000433298 KANK1Q14678 1352 aa11.87□□□□□ -0.51
LRCH3-205ENST00000433298 FNBP4Q8N3X1 1017 aaPredicted RBP11.86□□□□□ -0.51
LRCH3-205ENST00000433298 GJD4Q96KN9 370 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms