RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 PIK3C2BO00750 1634 aa20.89■□□□□ 0.93
SF1-209ENST00000433274 SCAF11Q99590 1463 aaKnown RBP20.88■□□□□ 0.93
SF1-209ENST00000433274 DISP3Q9P2K9 1392 aa20.88■□□□□ 0.93
SF1-209ENST00000433274 IDI1Q13907 227 aa20.88■□□□□ 0.93
SF1-209ENST00000433274 IQGAP1P46940 1657 aa20.88■□□□□ 0.93
SF1-209ENST00000433274 KIAA1210Q9ULL0 1709 aa20.87■□□□□ 0.93
SF1-209ENST00000433274 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
SF1-209ENST00000433274 CNGB1Q14028 1251 aaPredicted RBP20.87■□□□□ 0.93
SF1-209ENST00000433274 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
SF1-209ENST00000433274 TMF1P82094 1093 aa20.86■□□□□ 0.93
SF1-209ENST00000433274 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
SF1-209ENST00000433274 RPGRIP1LQ68CZ1 1315 aa20.86■□□□□ 0.93
SF1-209ENST00000433274 SLC52A1Q9NWF4 448 aa20.86■□□□□ 0.93
SF1-209ENST00000433274 PREX1Q8TCU6 1659 aa20.85■□□□□ 0.93
SF1-209ENST00000433274 PPLO60437 1756 aa20.85■□□□□ 0.93
SF1-209ENST00000433274 GTF3C3Q9Y5Q9 886 aa20.83■□□□□ 0.92
SF1-209ENST00000433274 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
SF1-209ENST00000433274 CLTCQ00610 1675 aaKnown RBP20.82■□□□□ 0.92
SF1-209ENST00000433274 CCDC184Q52MB2 194 aa20.82■□□□□ 0.92
SF1-209ENST00000433274 EIF3AQ14152 1382 aaKnown RBP20.81■□□□□ 0.92
SF1-209ENST00000433274 ERVK-7P63135 1459 aa20.81■□□□□ 0.92
SF1-209ENST00000433274 PIK3C2GO75747 1445 aa20.81■□□□□ 0.92
SF1-209ENST00000433274 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
SF1-209ENST00000433274 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
SF1-209ENST00000433274 VGFO15240 615 aaPredicted RBP20.78■□□□□ 0.92
SF1-209ENST00000433274 C14orf93Q9H972 538 aaKnown RBP20.78■□□□□ 0.92
SF1-209ENST00000433274 ESF1Q9H501 851 aaKnown RBP20.77■□□□□ 0.92
SF1-209ENST00000433274 MRS2Q9HD23 443 aa20.77■□□□□ 0.92
SF1-209ENST00000433274 TMEM131LA2VDJ0 1609 aa20.75■□□□□ 0.91
SF1-209ENST00000433274 SETBP1Q9Y6X0 1596 aa20.75■□□□□ 0.91
SF1-209ENST00000433274 TMEM132EQ6IEE7 984 aa20.73■□□□□ 0.91
SF1-209ENST00000433274 STAG3Q9UJ98 1225 aa20.73■□□□□ 0.91
SF1-209ENST00000433274 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
SF1-209ENST00000433274 CDCA8Q53HL2 280 aa20.72■□□□□ 0.91
SF1-209ENST00000433274 TRAK1Q9UPV9 953 aa20.72■□□□□ 0.91
SF1-209ENST00000433274 SENP3Q9H4L4 574 aaPredicted RBP20.71■□□□□ 0.91
SF1-209ENST00000433274 PANK3Q9H999 370 aa20.71■□□□□ 0.91
SF1-209ENST00000433274 ADGRB1O14514 1584 aa20.71■□□□□ 0.91
SF1-209ENST00000433274 SPATA31D1Q6ZQQ2 1576 aa20.71■□□□□ 0.91
SF1-209ENST00000433274 ZMYM3Q14202 1370 aa20.71■□□□□ 0.91
SF1-209ENST00000433274 PER1O15534 1290 aaPredicted RBP20.7■□□□□ 0.9
SF1-209ENST00000433274 FAM9BQ8IZU0 186 aa20.7■□□□□ 0.9
SF1-209ENST00000433274 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
SF1-209ENST00000433274 HNRNPUQ00839 825 aaKnown RBP eCLIP20.68■□□□□ 0.9
SF1-209ENST00000433274 CENPJQ9HC77 1338 aaPredicted RBP20.68■□□□□ 0.9
SF1-209ENST00000433274 RALBP1Q15311 655 aa20.66■□□□□ 0.9
SF1-209ENST00000433274 SLC24A1O60721 1099 aa20.66■□□□□ 0.9
SF1-209ENST00000433274 KTN1Q86UP2 1357 aaKnown RBP20.66■□□□□ 0.9
SF1-209ENST00000433274 MYO3AQ8NEV4 1616 aa20.65■□□□□ 0.9
SF1-209ENST00000433274 A2ML1A8K2U0 1454 aa20.63■□□□□ 0.89
SF1-209ENST00000433274 MYBBP1AQ9BQG0 1328 aaKnown RBP20.63■□□□□ 0.89
SF1-209ENST00000433274 SBNO2Q9Y2G9 1366 aa20.63■□□□□ 0.89
SF1-209ENST00000433274 CC2D1BQ5T0F9 858 aaKnown RBP20.62■□□□□ 0.89
SF1-209ENST00000433274 KDM5AP29375 1690 aaKnown RBP20.62■□□□□ 0.89
SF1-209ENST00000433274 TMC1Q8TDI8 760 aa20.61■□□□□ 0.89
SF1-209ENST00000433274 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
SF1-209ENST00000433274 MYOM1P52179 1685 aa20.59■□□□□ 0.89
SF1-209ENST00000433274 QRICH2Q9H0J4 1663 aa20.59■□□□□ 0.89
SF1-209ENST00000433274 STK26Q9P289 416 aa20.59■□□□□ 0.89
SF1-209ENST00000433274 KNSTRNQ9Y448 316 aa20.59■□□□□ 0.89
SF1-209ENST00000433274 TNRQ92752 1358 aa20.58■□□□□ 0.89
SF1-209ENST00000433274 RIMS2Q9UQ26 1411 aa20.58■□□□□ 0.89
SF1-209ENST00000433274 ASXL1Q8IXJ9 1541 aa20.58■□□□□ 0.88
SF1-209ENST00000433274 BRD4O60885 1362 aaPredicted RBP20.56■□□□□ 0.88
SF1-209ENST00000433274 ARHGEF28Q8N1W1 1705 aaKnown RBP20.55■□□□□ 0.88
SF1-209ENST00000433274 SAFB2Q14151 953 aaKnown RBP eCLIP20.54■□□□□ 0.88
SF1-209ENST00000433274 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
SF1-209ENST00000433274 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
SF1-209ENST00000433274 ALKQ9UM73 1620 aa20.54■□□□□ 0.88
SF1-209ENST00000433274 CEBPAP49715 358 aaPredicted RBP20.54■□□□□ 0.88
SF1-209ENST00000433274 DNAJC5Q9H3Z4 198 aa20.54■□□□□ 0.88
SF1-209ENST00000433274 YTHDC2Q9H6S0 1430 aaKnown RBP20.52■□□□□ 0.88
SF1-209ENST00000433274 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.87
SF1-209ENST00000433274 PLPPR3Q6T4P5 718 aa20.5■□□□□ 0.87
SF1-209ENST00000433274 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.5■□□□□ 0.87
SF1-209ENST00000433274 EVC2Q86UK5 1308 aa20.5■□□□□ 0.87
SF1-209ENST00000433274 PRAM1Q96QH2 718 aa20.48■□□□□ 0.87
SF1-209ENST00000433274 PTPRMP28827 1452 aa20.48■□□□□ 0.87
SF1-209ENST00000433274 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
SF1-209ENST00000433274 PELP1Q8IZL8 1130 aaKnown RBP20.47■□□□□ 0.87
SF1-209ENST00000433274 CARD14Q9BXL6 1004 aa20.47■□□□□ 0.87
SF1-209ENST00000433274 POGKQ9P215 609 aa20.47■□□□□ 0.87
SF1-209ENST00000433274 ZBED9Q6R2W3 1325 aa20.47■□□□□ 0.87
SF1-209ENST00000433274 SLC12A5Q9H2X9 1139 aa20.47■□□□□ 0.87
SF1-209ENST00000433274 HDGFP51858 240 aaKnown RBP20.45■□□□□ 0.87
SF1-209ENST00000433274 FER1L4A9Z1Z3 1794 aa20.45■□□□□ 0.86
SF1-209ENST00000433274 UBR1Q8IWV7 1749 aa20.44■□□□□ 0.86
SF1-209ENST00000433274 CABP2Q9NPB3 220 aa20.44■□□□□ 0.86
SF1-209ENST00000433274 MINK1Q8N4C8 1332 aaPredicted RBP20.44■□□□□ 0.86
SF1-209ENST00000433274 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
SF1-209ENST00000433274 TMEM2Q9UHN6 1383 aa20.44■□□□□ 0.86
SF1-209ENST00000433274 C3P01024 1663 aa20.44■□□□□ 0.86
SF1-209ENST00000433274 NPC1L1Q9UHC9 1359 aa20.44■□□□□ 0.86
SF1-209ENST00000433274 NLRP1Q9C000 1473 aa20.43■□□□□ 0.86
SF1-209ENST00000433274 BCANQ96GW7 911 aa20.43■□□□□ 0.86
SF1-209ENST00000433274 PPP2R1AP30153 589 aa20.42■□□□□ 0.86
SF1-209ENST00000433274 PUS7Q96PZ0 661 aaKnown RBP20.42■□□□□ 0.86
SF1-209ENST00000433274 SENP3-EIF4A1A0A087X0R7 540 aa20.42■□□□□ 0.86
SF1-209ENST00000433274 SETD1AO15047 1707 aaKnown RBP20.42■□□□□ 0.86
SF1-209ENST00000433274 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms