RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 IQGAP1P46940 1657 aa25.76■■□□□ 1.71
CTDSP1-203ENST00000431127 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.75■■□□□ 1.71
CTDSP1-203ENST00000431127 RIMS2Q9UQ26 1411 aa25.73■■□□□ 1.71
CTDSP1-203ENST00000431127 ZFYVE9O95405 1425 aa25.72■■□□□ 1.71
CTDSP1-203ENST00000431127 DISP3Q9P2K9 1392 aa25.72■■□□□ 1.71
CTDSP1-203ENST00000431127 PPP1R15AO75807 674 aaPredicted RBP25.72■■□□□ 1.71
CTDSP1-203ENST00000431127 FOXD1Q16676 465 aa25.71■■□□□ 1.71
CTDSP1-203ENST00000431127 MYO5BQ9ULV0 1848 aa25.69■■□□□ 1.7
CTDSP1-203ENST00000431127 CLTCL1P53675 1640 aa25.69■■□□□ 1.7
CTDSP1-203ENST00000431127 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
CTDSP1-203ENST00000431127 BCANQ96GW7 911 aa25.67■■□□□ 1.7
CTDSP1-203ENST00000431127 PLEKHG1Q9ULL1 1385 aa25.67■■□□□ 1.7
CTDSP1-203ENST00000431127 CCDC144AA2RUR9 1427 aa25.64■■□□□ 1.7
CTDSP1-203ENST00000431127 CPS1P31327 1500 aa25.63■■□□□ 1.69
CTDSP1-203ENST00000431127 ILDR2Q71H61 639 aa25.63■■□□□ 1.69
CTDSP1-203ENST00000431127 TOM1O60784 492 aa25.62■■□□□ 1.69
CTDSP1-203ENST00000431127 SLC26A8Q96RN1 970 aa25.62■■□□□ 1.69
CTDSP1-203ENST00000431127 KIF1BO60333 1816 aa25.61■■□□□ 1.69
CTDSP1-203ENST00000431127 NUTM2DQ5VT03 806 aaPredicted RBP25.61■■□□□ 1.69
CTDSP1-203ENST00000431127 RPGRIP1LQ68CZ1 1315 aa25.59■■□□□ 1.69
CTDSP1-203ENST00000431127 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
CTDSP1-203ENST00000431127 TBX22Q9Y458 520 aa25.57■■□□□ 1.68
CTDSP1-203ENST00000431127 PIP4K2BP78356 416 aa25.56■■□□□ 1.68
CTDSP1-203ENST00000431127 VGFO15240 615 aaPredicted RBP25.54■■□□□ 1.68
CTDSP1-203ENST00000431127 KCNA6P17658 529 aa25.54■■□□□ 1.68
CTDSP1-203ENST00000431127 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
CTDSP1-203ENST00000431127 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
CTDSP1-203ENST00000431127 NEXMIFQ5QGS0 1516 aa25.53■■□□□ 1.68
CTDSP1-203ENST00000431127 HSPA1LP34931 641 aa25.51■■□□□ 1.67
CTDSP1-203ENST00000431127 ANKRD30BQ9BXX2 1392 aa25.51■■□□□ 1.67
CTDSP1-203ENST00000431127 ADAMTS13Q76LX8 1427 aa25.51■■□□□ 1.67
CTDSP1-203ENST00000431127 DIP2AQ14689 1571 aa25.5■■□□□ 1.67
CTDSP1-203ENST00000431127 SPATA31E1Q6ZUB1 1445 aa25.5■■□□□ 1.67
CTDSP1-203ENST00000431127 PIK3R4Q99570 1358 aa25.48■■□□□ 1.67
CTDSP1-203ENST00000431127 SOCS7O14512 581 aa25.48■■□□□ 1.67
CTDSP1-203ENST00000431127 RGL3Q3MIN7 710 aa25.48■■□□□ 1.67
CTDSP1-203ENST00000431127 STRCP1A6NGW2 1772 aa25.48■■□□□ 1.67
CTDSP1-203ENST00000431127 LRRC7Q96NW7 1537 aa25.47■■□□□ 1.67
CTDSP1-203ENST00000431127 SETBP1Q9Y6X0 1596 aa25.47■■□□□ 1.67
CTDSP1-203ENST00000431127 NKTRP30414 1462 aaKnown RBP25.43■■□□□ 1.66
CTDSP1-203ENST00000431127 NWD1Q149M9 1564 aa25.43■■□□□ 1.66
CTDSP1-203ENST00000431127 PROSER2Q86WR7 435 aaPredicted RBP25.42■■□□□ 1.66
CTDSP1-203ENST00000431127 PPLO60437 1756 aa25.41■■□□□ 1.66
CTDSP1-203ENST00000431127 NRXN3Q9Y4C0 1643 aa25.4■■□□□ 1.66
CTDSP1-203ENST00000431127 CHD2O14647 1828 aaKnown RBP25.39■■□□□ 1.65
CTDSP1-203ENST00000431127 TMEM94Q12767 1356 aa25.38■■□□□ 1.65
CTDSP1-203ENST00000431127 AMOTL2Q9Y2J4 779 aa25.37■■□□□ 1.65
CTDSP1-203ENST00000431127 ALKQ9UM73 1620 aa25.37■■□□□ 1.65
CTDSP1-203ENST00000431127 METP08581 1390 aa25.36■■□□□ 1.65
CTDSP1-203ENST00000431127 ADGRF5Q8IZF2 1346 aa25.36■■□□□ 1.65
CTDSP1-203ENST00000431127 PTPRUQ92729 1446 aa25.33■■□□□ 1.65
CTDSP1-203ENST00000431127 NCOA3Q9Y6Q9 1424 aa25.32■■□□□ 1.64
CTDSP1-203ENST00000431127 IFT172Q9UG01 1749 aa25.32■■□□□ 1.64
CTDSP1-203ENST00000431127 STAC3Q96MF2 364 aa25.31■■□□□ 1.64
CTDSP1-203ENST00000431127 RBM33Q96EV2 1170 aaKnown RBP25.3■■□□□ 1.64
CTDSP1-203ENST00000431127 MYOM2P54296 1465 aa25.29■■□□□ 1.64
CTDSP1-203ENST00000431127 PIK3C2GO75747 1445 aa25.29■■□□□ 1.64
CTDSP1-203ENST00000431127 MSH6P52701 1360 aa25.28■■□□□ 1.64
CTDSP1-203ENST00000431127 XIRP1Q702N8 1843 aaKnown RBP25.28■■□□□ 1.64
CTDSP1-203ENST00000431127 C14orf37Q86TY3 774 aa25.26■■□□□ 1.63
CTDSP1-203ENST00000431127 DCAF11Q8TEB1 546 aa25.26■■□□□ 1.63
CTDSP1-203ENST00000431127 NRXN1Q9ULB1 1477 aa25.26■■□□□ 1.63
CTDSP1-203ENST00000431127 XRN1Q8IZH2 1706 aaKnown RBP25.26■■□□□ 1.63
CTDSP1-203ENST00000431127 SETD1AO15047 1707 aaKnown RBP25.24■■□□□ 1.63
CTDSP1-203ENST00000431127 DHX57Q6P158 1386 aaKnown RBP25.24■■□□□ 1.63
CTDSP1-203ENST00000431127 C19orf44Q9H6X5 657 aa25.23■■□□□ 1.63
CTDSP1-203ENST00000431127 C14orf93Q9H972 538 aaKnown RBP25.23■■□□□ 1.63
CTDSP1-203ENST00000431127 KDM2AQ9Y2K7 1162 aa25.22■■□□□ 1.63
CTDSP1-203ENST00000431127 MED1Q15648 1581 aaPredicted RBP25.21■■□□□ 1.63
CTDSP1-203ENST00000431127 PRAG1Q86YV5 1406 aa25.2■■□□□ 1.63
CTDSP1-203ENST00000431127 PTCH1Q13635 1447 aa25.2■■□□□ 1.62
CTDSP1-203ENST00000431127 CADPS2Q86UW7 1296 aa25.18■■□□□ 1.62
CTDSP1-203ENST00000431127 FAM135BQ49AJ0 1406 aa25.18■■□□□ 1.62
CTDSP1-203ENST00000431127 ATF3P18847 181 aa25.17■■□□□ 1.62
CTDSP1-203ENST00000431127 CFAP70Q5T0N1 1121 aa25.17■■□□□ 1.62
CTDSP1-203ENST00000431127 LRPPRCP42704 1394 aaKnown RBP25.17■■□□□ 1.62
CTDSP1-203ENST00000431127 TMEM132EQ6IEE7 984 aa25.16■■□□□ 1.62
CTDSP1-203ENST00000431127 ROBO2Q9HCK4 1378 aa25.16■■□□□ 1.62
CTDSP1-203ENST00000431127 LAMC1P11047 1609 aa25.15■■□□□ 1.62
CTDSP1-203ENST00000431127 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
CTDSP1-203ENST00000431127 SLAIN2Q9P270 581 aa25.15■■□□□ 1.62
CTDSP1-203ENST00000431127 ABCC11Q96J66 1382 aa25.15■■□□□ 1.62
CTDSP1-203ENST00000431127 STK26Q9P289 416 aa25.14■■□□□ 1.62
CTDSP1-203ENST00000431127 DCCP43146 1447 aa25.13■■□□□ 1.61
CTDSP1-203ENST00000431127 SIN3AQ96ST3 1273 aa25.13■■□□□ 1.61
CTDSP1-203ENST00000431127 PCGF6Q9BYE7 350 aa25.13■■□□□ 1.61
CTDSP1-203ENST00000431127 TECPR2O15040 1411 aa25.12■■□□□ 1.61
CTDSP1-203ENST00000431127 YTHDC2Q9H6S0 1430 aaKnown RBP25.12■■□□□ 1.61
CTDSP1-203ENST00000431127 ADGRL3Q9HAR2 1447 aa25.12■■□□□ 1.61
CTDSP1-203ENST00000431127 NEUROD1Q13562 356 aa25.11■■□□□ 1.61
CTDSP1-203ENST00000431127 ASXL1Q8IXJ9 1541 aa25.11■■□□□ 1.61
CTDSP1-203ENST00000431127 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.09■■□□□ 1.61
CTDSP1-203ENST00000431127 SIRT1Q96EB6 747 aa25.09■■□□□ 1.61
CTDSP1-203ENST00000431127 L3MBTL2Q969R5 705 aa25.07■■□□□ 1.6
CTDSP1-203ENST00000431127 KNDC1Q76NI1 1749 aa25.04■■□□□ 1.6
CTDSP1-203ENST00000431127 ADGRB1O14514 1584 aa25.03■■□□□ 1.6
CTDSP1-203ENST00000431127 WAPLQ7Z5K2 1190 aa25.03■■□□□ 1.6
CTDSP1-203ENST00000431127 RGS17Q9UGC6 210 aaPredicted RBP25.02■■□□□ 1.6
CTDSP1-203ENST00000431127 NALCNQ8IZF0 1738 aa25.01■■□□□ 1.59
CTDSP1-203ENST00000431127 ROBO1Q9Y6N7 1651 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms