RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 NEUROD1Q13562 356 aa21.21■□□□□ 0.99
SGCE-204ENST00000428696 TMEM131LA2VDJ0 1609 aa21.2■□□□□ 0.98
SGCE-204ENST00000428696 SLC26A8Q96RN1 970 aa21.2■□□□□ 0.98
SGCE-204ENST00000428696 STRCQ7RTU9 1775 aa21.2■□□□□ 0.98
SGCE-204ENST00000428696 SCAF11Q99590 1463 aaKnown RBP21.19■□□□□ 0.98
SGCE-204ENST00000428696 NPHP4O75161 1426 aaPredicted RBP21.18■□□□□ 0.98
SGCE-204ENST00000428696 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
SGCE-204ENST00000428696 SLIT1O75093 1534 aa21.16■□□□□ 0.98
SGCE-204ENST00000428696 ARHGAP23Q9P227 1491 aa21.16■□□□□ 0.98
SGCE-204ENST00000428696 SIN3AQ96ST3 1273 aa21.16■□□□□ 0.98
SGCE-204ENST00000428696 MYO5BQ9ULV0 1848 aa21.15■□□□□ 0.98
SGCE-204ENST00000428696 KDM2AQ9Y2K7 1162 aa21.15■□□□□ 0.98
SGCE-204ENST00000428696 VGFO15240 615 aaPredicted RBP21.14■□□□□ 0.98
SGCE-204ENST00000428696 KIF1BO60333 1816 aa21.14■□□□□ 0.97
SGCE-204ENST00000428696 RPGRIP1LQ68CZ1 1315 aa21.14■□□□□ 0.97
SGCE-204ENST00000428696 KDM5AP29375 1690 aaKnown RBP21.13■□□□□ 0.97
SGCE-204ENST00000428696 ZFYVE9O95405 1425 aa21.12■□□□□ 0.97
SGCE-204ENST00000428696 ZNF335Q9H4Z2 1342 aaPredicted RBP21.11■□□□□ 0.97
SGCE-204ENST00000428696 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
SGCE-204ENST00000428696 DCAF11Q8TEB1 546 aa21.11■□□□□ 0.97
SGCE-204ENST00000428696 POLR1AO95602 1720 aaPredicted RBP21.1■□□□□ 0.97
SGCE-204ENST00000428696 NEURL4Q96JN8 1562 aa21.09■□□□□ 0.97
SGCE-204ENST00000428696 MED14O60244 1454 aa21.08■□□□□ 0.97
SGCE-204ENST00000428696 PLEKHG1Q9ULL1 1385 aa21.08■□□□□ 0.97
SGCE-204ENST00000428696 SPATA31E1Q6ZUB1 1445 aa21.08■□□□□ 0.96
SGCE-204ENST00000428696 ADGRF5Q8IZF2 1346 aa21.06■□□□□ 0.96
SGCE-204ENST00000428696 IQGAP1P46940 1657 aa21.06■□□□□ 0.96
SGCE-204ENST00000428696 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
SGCE-204ENST00000428696 TBX22Q9Y458 520 aa21.04■□□□□ 0.96
SGCE-204ENST00000428696 L3MBTL2Q969R5 705 aa20.99■□□□□ 0.95
SGCE-204ENST00000428696 KCNA6P17658 529 aa20.98■□□□□ 0.95
SGCE-204ENST00000428696 CERKQ8TCT0 537 aa20.97■□□□□ 0.95
SGCE-204ENST00000428696 RBM33Q96EV2 1170 aaKnown RBP20.97■□□□□ 0.95
SGCE-204ENST00000428696 PROSER2Q86WR7 435 aaPredicted RBP20.96■□□□□ 0.95
SGCE-204ENST00000428696 AMOTL2Q9Y2J4 779 aa20.96■□□□□ 0.95
SGCE-204ENST00000428696 ADAMTS13Q76LX8 1427 aa20.96■□□□□ 0.95
SGCE-204ENST00000428696 CFAP70Q5T0N1 1121 aa20.95■□□□□ 0.95
SGCE-204ENST00000428696 TMEM132EQ6IEE7 984 aa20.95■□□□□ 0.95
SGCE-204ENST00000428696 STK26Q9P289 416 aa20.95■□□□□ 0.95
SGCE-204ENST00000428696 METP08581 1390 aa20.94■□□□□ 0.94
SGCE-204ENST00000428696 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
SGCE-204ENST00000428696 PPLO60437 1756 aa20.93■□□□□ 0.94
SGCE-204ENST00000428696 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
SGCE-204ENST00000428696 STAC3Q96MF2 364 aa20.93■□□□□ 0.94
SGCE-204ENST00000428696 C14orf93Q9H972 538 aaKnown RBP20.9■□□□□ 0.94
SGCE-204ENST00000428696 SETBP1Q9Y6X0 1596 aa20.9■□□□□ 0.94
SGCE-204ENST00000428696 ALKQ9UM73 1620 aa20.88■□□□□ 0.93
SGCE-204ENST00000428696 LTBP4Q8N2S1 1624 aa20.87■□□□□ 0.93
SGCE-204ENST00000428696 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
SGCE-204ENST00000428696 MYOM2P54296 1465 aa20.87■□□□□ 0.93
SGCE-204ENST00000428696 PIK3R4Q99570 1358 aa20.87■□□□□ 0.93
SGCE-204ENST00000428696 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
SGCE-204ENST00000428696 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
SGCE-204ENST00000428696 PTPRUQ92729 1446 aa20.85■□□□□ 0.93
SGCE-204ENST00000428696 CLSPNQ9HAW4 1339 aa20.85■□□□□ 0.93
SGCE-204ENST00000428696 IFT172Q9UG01 1749 aa20.85■□□□□ 0.93
SGCE-204ENST00000428696 CPS1P31327 1500 aa20.85■□□□□ 0.93
SGCE-204ENST00000428696 TMEM94Q12767 1356 aa20.83■□□□□ 0.93
SGCE-204ENST00000428696 UBAP1LF5GYI3 381 aa20.82■□□□□ 0.92
SGCE-204ENST00000428696 TRAK1Q9UPV9 953 aa20.82■□□□□ 0.92
SGCE-204ENST00000428696 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
SGCE-204ENST00000428696 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
SGCE-204ENST00000428696 LRRC7Q96NW7 1537 aa20.81■□□□□ 0.92
SGCE-204ENST00000428696 STRCP1A6NGW2 1772 aa20.81■□□□□ 0.92
SGCE-204ENST00000428696 NRXN1Q9ULB1 1477 aa20.8■□□□□ 0.92
SGCE-204ENST00000428696 WAPLQ7Z5K2 1190 aa20.8■□□□□ 0.92
SGCE-204ENST00000428696 PIP4K2BP78356 416 aa20.79■□□□□ 0.92
SGCE-204ENST00000428696 SAFB2Q14151 953 aaKnown RBP eCLIP20.79■□□□□ 0.92
SGCE-204ENST00000428696 NBPF8Q3BBV2 869 aa20.78■□□□□ 0.92
SGCE-204ENST00000428696 POGKQ9P215 609 aa20.78■□□□□ 0.92
SGCE-204ENST00000428696 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
SGCE-204ENST00000428696 CHD2O14647 1828 aaKnown RBP20.78■□□□□ 0.92
SGCE-204ENST00000428696 TOM1O60784 492 aa20.77■□□□□ 0.91
SGCE-204ENST00000428696 LRPPRCP42704 1394 aaKnown RBP20.77■□□□□ 0.91
SGCE-204ENST00000428696 YTHDC2Q9H6S0 1430 aaKnown RBP20.77■□□□□ 0.91
SGCE-204ENST00000428696 NKTRP30414 1462 aaKnown RBP20.76■□□□□ 0.91
SGCE-204ENST00000428696 ROBO2Q9HCK4 1378 aa20.76■□□□□ 0.91
SGCE-204ENST00000428696 MSH6P52701 1360 aa20.75■□□□□ 0.91
SGCE-204ENST00000428696 ATF3P18847 181 aa20.75■□□□□ 0.91
SGCE-204ENST00000428696 PRAM1Q96QH2 718 aa20.75■□□□□ 0.91
SGCE-204ENST00000428696 C19orf44Q9H6X5 657 aa20.74■□□□□ 0.91
SGCE-204ENST00000428696 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
SGCE-204ENST00000428696 ABCC11Q96J66 1382 aa20.73■□□□□ 0.91
SGCE-204ENST00000428696 TIMELESSQ9UNS1 1208 aa20.73■□□□□ 0.91
SGCE-204ENST00000428696 ROCK2O75116 1388 aaKnown RBP20.73■□□□□ 0.91
SGCE-204ENST00000428696 FBXO41Q8TF61 875 aa20.71■□□□□ 0.91
SGCE-204ENST00000428696 SETD1AO15047 1707 aaKnown RBP20.71■□□□□ 0.91
SGCE-204ENST00000428696 ASXL1Q8IXJ9 1541 aa20.71■□□□□ 0.91
SGCE-204ENST00000428696 LAMC1P11047 1609 aa20.7■□□□□ 0.9
SGCE-204ENST00000428696 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.9
SGCE-204ENST00000428696 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
SGCE-204ENST00000428696 XRN1Q8IZH2 1706 aaKnown RBP20.68■□□□□ 0.9
SGCE-204ENST00000428696 CADPS2Q86UW7 1296 aa20.68■□□□□ 0.9
SGCE-204ENST00000428696 IQSEC2Q5JU85 1478 aa20.67■□□□□ 0.9
SGCE-204ENST00000428696 NUTM2FA1L443 756 aa20.67■□□□□ 0.9
SGCE-204ENST00000428696 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
SGCE-204ENST00000428696 SLAIN2Q9P270 581 aa20.67■□□□□ 0.9
SGCE-204ENST00000428696 MINK1Q8N4C8 1332 aaPredicted RBP20.66■□□□□ 0.9
SGCE-204ENST00000428696 PTCH1Q13635 1447 aa20.66■□□□□ 0.9
SGCE-204ENST00000428696 SIRT1Q96EB6 747 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms