RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ANKRD30AQ9BXX3 1397 aa6.63□□□□□ -1.35
RIF1-203ENST00000428287 ARHGAP31Q2M1Z3 1444 aa6.62□□□□□ -1.35
RIF1-203ENST00000428287 PPRC1Q5VV67 1664 aaKnown RBP6.62□□□□□ -1.35
RIF1-203ENST00000428287 CGNL1Q0VF96 1302 aa6.62□□□□□ -1.35
RIF1-203ENST00000428287 NUP160Q12769 1436 aa6.62□□□□□ -1.35
RIF1-203ENST00000428287 TROQ12816 1431 aaPredicted RBP6.62□□□□□ -1.35
RIF1-203ENST00000428287 MYH6P13533 1939 aa6.62□□□□□ -1.35
RIF1-203ENST00000428287 ANKRD50Q9ULJ7 1429 aa6.62□□□□□ -1.35
RIF1-203ENST00000428287 URB2Q14146 1524 aaKnown RBP6.62□□□□□ -1.35
RIF1-203ENST00000428287 SETD1BQ9UPS6 1966 aaKnown RBP6.62□□□□□ -1.35
RIF1-203ENST00000428287 MRE11P49959 708 aa6.62□□□□□ -1.35
RIF1-203ENST00000428287 PHF23Q9BUL5 403 aaPredicted RBP6.62□□□□□ -1.35
RIF1-203ENST00000428287 KDM5AP29375 1690 aaKnown RBP6.61□□□□□ -1.35
RIF1-203ENST00000428287 KIAA0556O60303 1618 aa6.61□□□□□ -1.35
RIF1-203ENST00000428287 DDIT3P35638 169 aa6.61□□□□□ -1.35
RIF1-203ENST00000428287 MAP7D2Q96T17 732 aa6.61□□□□□ -1.35
RIF1-203ENST00000428287 PRDM4Q9UKN5 801 aa6.61□□□□□ -1.35
RIF1-203ENST00000428287 KANK1Q14678 1352 aa6.61□□□□□ -1.35
RIF1-203ENST00000428287 ADAMTS12P58397 1594 aa6.61□□□□□ -1.35
RIF1-203ENST00000428287 NEURL4Q96JN8 1562 aa6.61□□□□□ -1.35
RIF1-203ENST00000428287 DAXXQ9UER7 740 aaPredicted RBP6.61□□□□□ -1.35
RIF1-203ENST00000428287 CALD1Q05682 793 aaKnown RBP6.6□□□□□ -1.35
RIF1-203ENST00000428287 MYH15Q9Y2K3 1946 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 BECN1Q14457 450 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 HS1BP3Q53T59 392 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 VSIG10Q8N0Z9 540 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 AMER1Q5JTC6 1135 aaPredicted RBP6.6□□□□□ -1.35
RIF1-203ENST00000428287 NCBP3Q53F19 620 aaKnown RBP6.6□□□□□ -1.35
RIF1-203ENST00000428287 ERBB4Q15303 1308 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 CCDC141Q6ZP82 1450 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 SLC4A3P48751 1232 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 PPP1R9BQ96SB3 815 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 PANK2Q9BZ23 570 aa6.6□□□□□ -1.35
RIF1-203ENST00000428287 ZNF692Q9BU19 519 aaPredicted RBP6.59□□□□□ -1.35
RIF1-203ENST00000428287 DISP1Q96F81 1524 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 GRIN2AQ12879 1464 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 PLIN1O60240 522 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 MAGI2Q86UL8 1455 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 SLFN5Q08AF3 891 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.59□□□□□ -1.35
RIF1-203ENST00000428287 PLA2R1Q13018 1463 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 TSPOAP1O95153 1857 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 SEC24BO95487 1268 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 TBC1D2Q9BYX2 928 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 CHIC2Q9UKJ5 165 aa6.59□□□□□ -1.35
RIF1-203ENST00000428287 MYO3AQ8NEV4 1616 aa6.59□□□□□ -1.36
RIF1-203ENST00000428287 TPM2P07951 284 aa6.59□□□□□ -1.36
RIF1-203ENST00000428287 SKAP1Q86WV1 359 aa6.59□□□□□ -1.36
RIF1-203ENST00000428287 ASXL1Q8IXJ9 1541 aa6.58□□□□□ -1.36
RIF1-203ENST00000428287 ABCA8O94911 1581 aa6.58□□□□□ -1.36
RIF1-203ENST00000428287 MAST1Q9Y2H9 1570 aa6.58□□□□□ -1.36
RIF1-203ENST00000428287 ANKRD26Q9UPS8 1709 aa6.58□□□□□ -1.36
RIF1-203ENST00000428287 HSP90AA1P07900 732 aaKnown RBP6.58□□□□□ -1.36
RIF1-203ENST00000428287 ATP1B4Q9UN42 357 aaPredicted RBP6.58□□□□□ -1.36
RIF1-203ENST00000428287 GOLGA2Q08379 1002 aa6.57□□□□□ -1.36
RIF1-203ENST00000428287 CARD11Q9BXL7 1154 aa6.57□□□□□ -1.36
RIF1-203ENST00000428287 CIZ1Q9ULV3 898 aaPredicted RBP6.57□□□□□ -1.36
RIF1-203ENST00000428287 PREX2Q70Z35 1606 aa6.57□□□□□ -1.36
RIF1-203ENST00000428287 ABCA6Q8N139 1617 aa6.57□□□□□ -1.36
RIF1-203ENST00000428287 MADDQ8WXG6 1647 aa6.57□□□□□ -1.36
RIF1-203ENST00000428287 A2MP01023 1474 aa6.57□□□□□ -1.36
RIF1-203ENST00000428287 FAM135AQ9P2D6 1515 aa6.57□□□□□ -1.36
RIF1-203ENST00000428287 ZC3H13Q5T200 1668 aaKnown RBP6.56□□□□□ -1.36
RIF1-203ENST00000428287 MTERF4Q7Z6M4 381 aaKnown RBP6.56□□□□□ -1.36
RIF1-203ENST00000428287 CHD2O14647 1828 aaKnown RBP6.56□□□□□ -1.36
RIF1-203ENST00000428287 PDLIM2Q96JY6 352 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 PKD2Q13563 968 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 REREQ9P2R6 1566 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 SBNO2Q9Y2G9 1366 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 TRAK2O60296 914 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 CHMP5Q9NZZ3 219 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 USP32Q8NFA0 1604 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 ZNF644Q9H582 1327 aaPredicted RBP6.56□□□□□ -1.36
RIF1-203ENST00000428287 ADAMTS8Q9UP79 889 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 CLTCL1P53675 1640 aa6.56□□□□□ -1.36
RIF1-203ENST00000428287 GOLGA6L3A6NEY3 463 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 YEATS2Q9ULM3 1422 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 SLC24A1O60721 1099 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 STAC3Q96MF2 364 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 ADGRB2O60241 1585 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 MYH11P35749 1972 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 OFD1O75665 1012 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 TTC37Q6PGP7 1564 aa6.55□□□□□ -1.36
RIF1-203ENST00000428287 C9orf84Q5VXU9 1444 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 SNX21Q969T3 373 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 GRPEL1Q9HAV7 217 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 MYH13Q9UKX3 1938 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 CLUAP1Q96AJ1 413 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 ADGRL1O94910 1474 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 DEPDC5O75140 1603 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 N4BP2Q86UW6 1770 aaPredicted RBP6.54□□□□□ -1.36
RIF1-203ENST00000428287 ZNF500O60304 480 aaPredicted RBP6.54□□□□□ -1.36
RIF1-203ENST00000428287 RBM25P49756 843 aaKnown RBP6.54□□□□□ -1.36
RIF1-203ENST00000428287 RIPK4P57078 832 aa6.54□□□□□ -1.36
RIF1-203ENST00000428287 IGHDP01880 384 aa6.53□□□□□ -1.36
RIF1-203ENST00000428287 ZSCAN30Q86W11 494 aa6.53□□□□□ -1.36
RIF1-203ENST00000428287 NUP155O75694 1391 aa6.53□□□□□ -1.36
RIF1-203ENST00000428287 TDRD9Q8NDG6 1382 aaKnown RBP6.53□□□□□ -1.36
RIF1-203ENST00000428287 ERBINQ96RT1 1412 aa6.53□□□□□ -1.36
RIF1-203ENST00000428287 GAS2L3Q86XJ1 694 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms