RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 NEURL4Q96JN8 1562 aa21.89■■□□□ 1.09
KDM3A-204ENST00000427678 ZFYVE9O95405 1425 aa21.89■■□□□ 1.09
KDM3A-204ENST00000427678 ZNF335Q9H4Z2 1342 aaPredicted RBP21.88■■□□□ 1.09
KDM3A-204ENST00000427678 RPGRIP1LQ68CZ1 1315 aa21.87■■□□□ 1.09
KDM3A-204ENST00000427678 CERKQ8TCT0 537 aa21.87■■□□□ 1.09
KDM3A-204ENST00000427678 SLC26A8Q96RN1 970 aa21.86■■□□□ 1.09
KDM3A-204ENST00000427678 PLEKHG1Q9ULL1 1385 aa21.85■■□□□ 1.09
KDM3A-204ENST00000427678 CLTCL1P53675 1640 aa21.84■■□□□ 1.09
KDM3A-204ENST00000427678 POLR1AO95602 1720 aaPredicted RBP21.84■■□□□ 1.09
KDM3A-204ENST00000427678 VGFO15240 615 aaPredicted RBP21.84■■□□□ 1.09
KDM3A-204ENST00000427678 RGL3Q3MIN7 710 aa21.84■■□□□ 1.09
KDM3A-204ENST00000427678 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
KDM3A-204ENST00000427678 ANKRD30BQ9BXX2 1392 aa21.84■■□□□ 1.09
KDM3A-204ENST00000427678 TBX22Q9Y458 520 aa21.82■■□□□ 1.08
KDM3A-204ENST00000427678 IQGAP1P46940 1657 aa21.81■■□□□ 1.08
KDM3A-204ENST00000427678 KCNA6P17658 529 aa21.77■■□□□ 1.08
KDM3A-204ENST00000427678 LTBP4Q8N2S1 1624 aa21.77■■□□□ 1.07
KDM3A-204ENST00000427678 SPATA31E1Q6ZUB1 1445 aa21.76■■□□□ 1.07
KDM3A-204ENST00000427678 MYO5BQ9ULV0 1848 aa21.76■■□□□ 1.07
KDM3A-204ENST00000427678 PCGF6Q9BYE7 350 aa21.75■■□□□ 1.07
KDM3A-204ENST00000427678 KIF1BO60333 1816 aa21.74■■□□□ 1.07
KDM3A-204ENST00000427678 ADAMTS13Q76LX8 1427 aa21.72■■□□□ 1.07
KDM3A-204ENST00000427678 CPS1P31327 1500 aa21.7■■□□□ 1.07
KDM3A-204ENST00000427678 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.07
KDM3A-204ENST00000427678 FBXO41Q8TF61 875 aa21.7■■□□□ 1.06
KDM3A-204ENST00000427678 PROSER2Q86WR7 435 aaPredicted RBP21.68■■□□□ 1.06
KDM3A-204ENST00000427678 ADGRF5Q8IZF2 1346 aa21.68■■□□□ 1.06
KDM3A-204ENST00000427678 PIK3R4Q99570 1358 aa21.68■■□□□ 1.06
KDM3A-204ENST00000427678 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
KDM3A-204ENST00000427678 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
KDM3A-204ENST00000427678 AMOTL2Q9Y2J4 779 aa21.66■■□□□ 1.06
KDM3A-204ENST00000427678 DCAF11Q8TEB1 546 aa21.65■■□□□ 1.06
KDM3A-204ENST00000427678 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.06
KDM3A-204ENST00000427678 KDM2AQ9Y2K7 1162 aa21.64■■□□□ 1.05
KDM3A-204ENST00000427678 SETBP1Q9Y6X0 1596 aa21.63■■□□□ 1.05
KDM3A-204ENST00000427678 METP08581 1390 aa21.62■■□□□ 1.05
KDM3A-204ENST00000427678 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
KDM3A-204ENST00000427678 ILDR1Q86SU0 546 aaPredicted RBP21.62■■□□□ 1.05
KDM3A-204ENST00000427678 DIP2AQ14689 1571 aa21.61■■□□□ 1.05
KDM3A-204ENST00000427678 UBAP1LF5GYI3 381 aa21.61■■□□□ 1.05
KDM3A-204ENST00000427678 SIN3AQ96ST3 1273 aa21.61■■□□□ 1.05
KDM3A-204ENST00000427678 TOM1O60784 492 aa21.6■■□□□ 1.05
KDM3A-204ENST00000427678 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
KDM3A-204ENST00000427678 TMEM94Q12767 1356 aa21.6■■□□□ 1.05
KDM3A-204ENST00000427678 RBM33Q96EV2 1170 aaKnown RBP21.59■■□□□ 1.05
KDM3A-204ENST00000427678 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
KDM3A-204ENST00000427678 NKTRP30414 1462 aaKnown RBP21.57■■□□□ 1.04
KDM3A-204ENST00000427678 PPLO60437 1756 aa21.56■■□□□ 1.04
KDM3A-204ENST00000427678 PTPRUQ92729 1446 aa21.56■■□□□ 1.04
KDM3A-204ENST00000427678 NRXN3Q9Y4C0 1643 aa21.55■■□□□ 1.04
KDM3A-204ENST00000427678 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
KDM3A-204ENST00000427678 STRCP1A6NGW2 1772 aa21.55■■□□□ 1.04
KDM3A-204ENST00000427678 ALKQ9UM73 1620 aa21.55■■□□□ 1.04
KDM3A-204ENST00000427678 PIK3C2GO75747 1445 aa21.55■■□□□ 1.04
KDM3A-204ENST00000427678 MYOM2P54296 1465 aa21.54■■□□□ 1.04
KDM3A-204ENST00000427678 CFAP70Q5T0N1 1121 aa21.54■■□□□ 1.04
KDM3A-204ENST00000427678 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
KDM3A-204ENST00000427678 NWD1Q149M9 1564 aa21.53■■□□□ 1.04
KDM3A-204ENST00000427678 NRXN1Q9ULB1 1477 aa21.52■■□□□ 1.04
KDM3A-204ENST00000427678 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
KDM3A-204ENST00000427678 NCOA3Q9Y6Q9 1424 aa21.52■■□□□ 1.04
KDM3A-204ENST00000427678 CHD2O14647 1828 aaKnown RBP21.51■■□□□ 1.03
KDM3A-204ENST00000427678 C19orf44Q9H6X5 657 aa21.51■■□□□ 1.03
KDM3A-204ENST00000427678 STK26Q9P289 416 aa21.51■■□□□ 1.03
KDM3A-204ENST00000427678 MSH6P52701 1360 aa21.5■■□□□ 1.03
KDM3A-204ENST00000427678 PIP4K2BP78356 416 aa21.49■■□□□ 1.03
KDM3A-204ENST00000427678 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
KDM3A-204ENST00000427678 IFT172Q9UG01 1749 aa21.47■■□□□ 1.03
KDM3A-204ENST00000427678 LRPPRCP42704 1394 aaKnown RBP21.47■■□□□ 1.03
KDM3A-204ENST00000427678 ABCC11Q96J66 1382 aa21.47■■□□□ 1.03
KDM3A-204ENST00000427678 ATF3P18847 181 aa21.46■■□□□ 1.03
KDM3A-204ENST00000427678 CADPS2Q86UW7 1296 aa21.45■■□□□ 1.02
KDM3A-204ENST00000427678 ROBO2Q9HCK4 1378 aa21.45■■□□□ 1.02
KDM3A-204ENST00000427678 SIRT1Q96EB6 747 aa21.44■■□□□ 1.02
KDM3A-204ENST00000427678 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
KDM3A-204ENST00000427678 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
KDM3A-204ENST00000427678 YTHDC2Q9H6S0 1430 aaKnown RBP21.42■■□□□ 1.02
KDM3A-204ENST00000427678 PRAG1Q86YV5 1406 aa21.41■■□□□ 1.02
KDM3A-204ENST00000427678 CLSPNQ9HAW4 1339 aa21.41■■□□□ 1.02
KDM3A-204ENST00000427678 WAPLQ7Z5K2 1190 aa21.41■■□□□ 1.02
KDM3A-204ENST00000427678 XRN1Q8IZH2 1706 aaKnown RBP21.41■■□□□ 1.02
KDM3A-204ENST00000427678 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
KDM3A-204ENST00000427678 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
KDM3A-204ENST00000427678 TECPR2O15040 1411 aa21.39■■□□□ 1.02
KDM3A-204ENST00000427678 SETD1AO15047 1707 aaKnown RBP21.39■■□□□ 1.01
KDM3A-204ENST00000427678 POGKQ9P215 609 aa21.37■■□□□ 1.01
KDM3A-204ENST00000427678 TRAK1Q9UPV9 953 aa21.37■■□□□ 1.01
KDM3A-204ENST00000427678 NBPF1Q3BBV0 1214 aa21.36■■□□□ 1.01
KDM3A-204ENST00000427678 XIRP1Q702N8 1843 aaKnown RBP21.36■■□□□ 1.01
KDM3A-204ENST00000427678 ASXL1Q8IXJ9 1541 aa21.35■■□□□ 1.01
KDM3A-204ENST00000427678 PRAM1Q96QH2 718 aa21.35■■□□□ 1.01
KDM3A-204ENST00000427678 LAMC1P11047 1609 aa21.35■■□□□ 1.01
KDM3A-204ENST00000427678 FAM135BQ49AJ0 1406 aa21.35■■□□□ 1.01
KDM3A-204ENST00000427678 ADGRL3Q9HAR2 1447 aa21.35■■□□□ 1.01
KDM3A-204ENST00000427678 DCCP43146 1447 aa21.34■■□□□ 1.01
KDM3A-204ENST00000427678 HSPA1LP34931 641 aa21.32■■□□□ 1
KDM3A-204ENST00000427678 TIMELESSQ9UNS1 1208 aa21.32■■□□□ 1
KDM3A-204ENST00000427678 PLEKHH1Q9ULM0 1364 aa21.32■■□□□ 1
KDM3A-204ENST00000427678 ADGRB1O14514 1584 aa21.31■■□□□ 1
KDM3A-204ENST00000427678 SAFB2Q14151 953 aaKnown RBP eCLIP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms