RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 C11orf95C9JLR9 678 aaPredicted RBP20.09■□□□□ 0.81
SEMA4D-204ENST00000420101 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.8
SEMA4D-204ENST00000420101 CCDC7Q96M83 1385 aa20.08■□□□□ 0.8
SEMA4D-204ENST00000420101 FBXO31Q5XUX0 539 aaPredicted RBP20.07■□□□□ 0.8
SEMA4D-204ENST00000420101 SLC52A1Q9NWF4 448 aa20.06■□□□□ 0.8
SEMA4D-204ENST00000420101 NEURL4Q96JN8 1562 aa20.06■□□□□ 0.8
SEMA4D-204ENST00000420101 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
SEMA4D-204ENST00000420101 IDI1Q13907 227 aa20.05■□□□□ 0.8
SEMA4D-204ENST00000420101 SIGLEC1Q9BZZ2 1709 aa20.05■□□□□ 0.8
SEMA4D-204ENST00000420101 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
SEMA4D-204ENST00000420101 ADGRB3O60242 1522 aa20.04■□□□□ 0.8
SEMA4D-204ENST00000420101 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
SEMA4D-204ENST00000420101 MADDQ8WXG6 1647 aa20.04■□□□□ 0.8
SEMA4D-204ENST00000420101 ADGRF5Q8IZF2 1346 aa20.03■□□□□ 0.8
SEMA4D-204ENST00000420101 MROH2AA6NES4 1674 aa20.03■□□□□ 0.8
SEMA4D-204ENST00000420101 CLTCQ00610 1675 aaKnown RBP20.03■□□□□ 0.8
SEMA4D-204ENST00000420101 SYNMO15061 1565 aa20.03■□□□□ 0.8
SEMA4D-204ENST00000420101 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
SEMA4D-204ENST00000420101 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.8
SEMA4D-204ENST00000420101 MYOM2P54296 1465 aa20.01■□□□□ 0.79
SEMA4D-204ENST00000420101 PREX1Q8TCU6 1659 aa20.01■□□□□ 0.79
SEMA4D-204ENST00000420101 NUTM2DQ5VT03 806 aaPredicted RBP20■□□□□ 0.79
SEMA4D-204ENST00000420101 ERVK-7P63135 1459 aa20■□□□□ 0.79
SEMA4D-204ENST00000420101 CFAP70Q5T0N1 1121 aa19.99■□□□□ 0.79
SEMA4D-204ENST00000420101 PRKCSHP14314 528 aaPredicted RBP19.97■□□□□ 0.79
SEMA4D-204ENST00000420101 DEKP35659 375 aaKnown RBP19.97■□□□□ 0.79
SEMA4D-204ENST00000420101 ZMYM3Q14202 1370 aa19.97■□□□□ 0.79
SEMA4D-204ENST00000420101 PIK3C2BO00750 1634 aa19.97■□□□□ 0.79
SEMA4D-204ENST00000420101 VGFO15240 615 aaPredicted RBP19.97■□□□□ 0.79
SEMA4D-204ENST00000420101 LAMC1P11047 1609 aa19.96■□□□□ 0.79
SEMA4D-204ENST00000420101 IFT172Q9UG01 1749 aa19.93■□□□□ 0.78
SEMA4D-204ENST00000420101 TMF1P82094 1093 aa19.92■□□□□ 0.78
SEMA4D-204ENST00000420101 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
SEMA4D-204ENST00000420101 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
SEMA4D-204ENST00000420101 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
SEMA4D-204ENST00000420101 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
SEMA4D-204ENST00000420101 POLR1AO95602 1720 aaPredicted RBP19.91■□□□□ 0.78
SEMA4D-204ENST00000420101 PPLO60437 1756 aa19.9■□□□□ 0.78
SEMA4D-204ENST00000420101 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
SEMA4D-204ENST00000420101 SPATA31D1Q6ZQQ2 1576 aa19.89■□□□□ 0.77
SEMA4D-204ENST00000420101 KIAA1210Q9ULL0 1709 aa19.89■□□□□ 0.77
SEMA4D-204ENST00000420101 PIK3C2GO75747 1445 aa19.88■□□□□ 0.77
SEMA4D-204ENST00000420101 C14orf93Q9H972 538 aaKnown RBP19.88■□□□□ 0.77
SEMA4D-204ENST00000420101 NEXMIFQ5QGS0 1516 aa19.88■□□□□ 0.77
SEMA4D-204ENST00000420101 HNRNPUQ00839 825 aaKnown RBP eCLIP19.88■□□□□ 0.77
SEMA4D-204ENST00000420101 TESK2Q96S53 571 aa19.88■□□□□ 0.77
SEMA4D-204ENST00000420101 NOP58Q9Y2X3 529 aaKnown RBP19.88■□□□□ 0.77
SEMA4D-204ENST00000420101 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
SEMA4D-204ENST00000420101 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
SEMA4D-204ENST00000420101 TNRQ92752 1358 aa19.86■□□□□ 0.77
SEMA4D-204ENST00000420101 TMEM132EQ6IEE7 984 aa19.86■□□□□ 0.77
SEMA4D-204ENST00000420101 CEBPAP49715 358 aaPredicted RBP19.85■□□□□ 0.77
SEMA4D-204ENST00000420101 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
SEMA4D-204ENST00000420101 DISP3Q9P2K9 1392 aa19.84■□□□□ 0.77
SEMA4D-204ENST00000420101 IQGAP1P46940 1657 aa19.84■□□□□ 0.77
SEMA4D-204ENST00000420101 MYO5BQ9ULV0 1848 aa19.82■□□□□ 0.76
SEMA4D-204ENST00000420101 CDCA8Q53HL2 280 aa19.82■□□□□ 0.76
SEMA4D-204ENST00000420101 ZFYVE9O95405 1425 aa19.81■□□□□ 0.76
SEMA4D-204ENST00000420101 A2ML1A8K2U0 1454 aa19.81■□□□□ 0.76
SEMA4D-204ENST00000420101 SETBP1Q9Y6X0 1596 aa19.8■□□□□ 0.76
SEMA4D-204ENST00000420101 SLC24A1O60721 1099 aa19.8■□□□□ 0.76
SEMA4D-204ENST00000420101 RIMS2Q9UQ26 1411 aa19.79■□□□□ 0.76
SEMA4D-204ENST00000420101 HDGFP51858 240 aaKnown RBP19.79■□□□□ 0.76
SEMA4D-204ENST00000420101 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
SEMA4D-204ENST00000420101 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
SEMA4D-204ENST00000420101 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
SEMA4D-204ENST00000420101 STK26Q9P289 416 aa19.78■□□□□ 0.76
SEMA4D-204ENST00000420101 ZBED9Q6R2W3 1325 aa19.78■□□□□ 0.76
SEMA4D-204ENST00000420101 FER1L4A9Z1Z3 1794 aa19.75■□□□□ 0.75
SEMA4D-204ENST00000420101 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
SEMA4D-204ENST00000420101 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
SEMA4D-204ENST00000420101 PANK3Q9H999 370 aa19.72■□□□□ 0.75
SEMA4D-204ENST00000420101 ANP32AP39687 249 aaKnown RBP19.72■□□□□ 0.75
SEMA4D-204ENST00000420101 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
SEMA4D-204ENST00000420101 NLRP1Q9C000 1473 aa19.7■□□□□ 0.74
SEMA4D-204ENST00000420101 IPO9Q96P70 1041 aaKnown RBP19.69■□□□□ 0.74
SEMA4D-204ENST00000420101 C3P01024 1663 aa19.69■□□□□ 0.74
SEMA4D-204ENST00000420101 POGKQ9P215 609 aa19.69■□□□□ 0.74
SEMA4D-204ENST00000420101 MRS2Q9HD23 443 aa19.68■□□□□ 0.74
SEMA4D-204ENST00000420101 ALKQ9UM73 1620 aa19.68■□□□□ 0.74
SEMA4D-204ENST00000420101 TMEM2Q9UHN6 1383 aa19.67■□□□□ 0.74
SEMA4D-204ENST00000420101 USP35Q9P2H5 1018 aa19.67■□□□□ 0.74
SEMA4D-204ENST00000420101 EID1Q9Y6B2 187 aa19.67■□□□□ 0.74
SEMA4D-204ENST00000420101 SBNO2Q9Y2G9 1366 aa19.66■□□□□ 0.74
SEMA4D-204ENST00000420101 YTHDC2Q9H6S0 1430 aaKnown RBP19.66■□□□□ 0.74
SEMA4D-204ENST00000420101 MYO3AQ8NEV4 1616 aa19.66■□□□□ 0.74
SEMA4D-204ENST00000420101 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
SEMA4D-204ENST00000420101 TXNDC2Q86VQ3 553 aa19.65■□□□□ 0.74
SEMA4D-204ENST00000420101 KNSTRNQ9Y448 316 aa19.65■□□□□ 0.74
SEMA4D-204ENST00000420101 EVC2Q86UK5 1308 aa19.64■□□□□ 0.74
SEMA4D-204ENST00000420101 KDM5AP29375 1690 aaKnown RBP19.64■□□□□ 0.73
SEMA4D-204ENST00000420101 IRX6P78412 446 aaPredicted RBP19.64■□□□□ 0.73
SEMA4D-204ENST00000420101 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
SEMA4D-204ENST00000420101 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
SEMA4D-204ENST00000420101 UBR1Q8IWV7 1749 aa19.64■□□□□ 0.73
SEMA4D-204ENST00000420101 ASXL1Q8IXJ9 1541 aa19.64■□□□□ 0.73
SEMA4D-204ENST00000420101 SMG6Q86US8 1419 aaKnown RBP19.63■□□□□ 0.73
SEMA4D-204ENST00000420101 QRICH2Q9H0J4 1663 aa19.63■□□□□ 0.73
SEMA4D-204ENST00000420101 RALBP1Q15311 655 aa19.63■□□□□ 0.73
SEMA4D-204ENST00000420101 THEMISQ8N1K5 641 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms