RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 ZNF454Q8N9F8 522 aa9.96□□□□□ -0.82
TVP23C-202ENST00000419890 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
TVP23C-202ENST00000419890 KCNH8Q96L42 1107 aa9.96□□□□□ -0.82
TVP23C-202ENST00000419890 TSHZ2Q9NRE2 1034 aa9.96□□□□□ -0.82
TVP23C-202ENST00000419890 RANGAP1P46060 587 aaPredicted RBP9.95□□□□□ -0.82
TVP23C-202ENST00000419890 FOSBP53539 338 aa9.95□□□□□ -0.82
TVP23C-202ENST00000419890 PTPN5P54829 565 aa9.95□□□□□ -0.82
TVP23C-202ENST00000419890 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
TVP23C-202ENST00000419890 CTTNBP2Q8WZ74 1663 aa9.94□□□□□ -0.82
TVP23C-202ENST00000419890 SETD5Q9C0A6 1442 aa9.94□□□□□ -0.82
TVP23C-202ENST00000419890 DISP1Q96F81 1524 aa9.93□□□□□ -0.82
TVP23C-202ENST00000419890 UGGT2Q9NYU1 1516 aa9.93□□□□□ -0.82
TVP23C-202ENST00000419890 THSD4Q6ZMP0 1018 aa9.93□□□□□ -0.82
TVP23C-202ENST00000419890 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
TVP23C-202ENST00000419890 ZBED2Q9BTP6 218 aa9.93□□□□□ -0.82
TVP23C-202ENST00000419890 EFCAB5A4FU69 1503 aa9.92□□□□□ -0.82
TVP23C-202ENST00000419890 LRRC9Q6ZRR7 1453 aa9.92□□□□□ -0.82
TVP23C-202ENST00000419890 RAB3GAP2Q9H2M9 1393 aa9.92□□□□□ -0.82
TVP23C-202ENST00000419890 CCER2I3L3R5 266 aa9.92□□□□□ -0.82
TVP23C-202ENST00000419890 CHGAP10645 457 aaKnown RBP9.92□□□□□ -0.82
TVP23C-202ENST00000419890 PPP1R15BQ5SWA1 713 aa9.92□□□□□ -0.82
TVP23C-202ENST00000419890 ANO8Q9HCE9 1232 aaPredicted RBP9.92□□□□□ -0.82
TVP23C-202ENST00000419890 NCKAP5LQ9HCH0 1330 aa9.91□□□□□ -0.82
TVP23C-202ENST00000419890 ADCY10Q96PN6 1610 aa9.9□□□□□ -0.82
TVP23C-202ENST00000419890 KANK4Q5T7N3 995 aaPredicted RBP9.9□□□□□ -0.82
TVP23C-202ENST00000419890 KIAA0556O60303 1618 aa9.89□□□□□ -0.83
TVP23C-202ENST00000419890 RGS20O76081 388 aa9.89□□□□□ -0.83
TVP23C-202ENST00000419890 PTPREP23469 700 aa9.89□□□□□ -0.83
TVP23C-202ENST00000419890 FYCO1Q9BQS8 1478 aa9.89□□□□□ -0.83
TVP23C-202ENST00000419890 UACAQ9BZF9 1416 aa9.89□□□□□ -0.83
TVP23C-202ENST00000419890 FAM69CQ0P6D2 419 aa9.88□□□□□ -0.83
TVP23C-202ENST00000419890 PCF11O94913 1555 aaKnown RBP9.87□□□□□ -0.83
TVP23C-202ENST00000419890 A0A0G2JS52 829 aa9.86□□□□□ -0.83
TVP23C-202ENST00000419890 WNT2BQ93097 391 aa9.86□□□□□ -0.83
TVP23C-202ENST00000419890 ADAM33Q9BZ11 813 aa9.86□□□□□ -0.83
TVP23C-202ENST00000419890 ABCC2Q92887 1545 aa9.86□□□□□ -0.83
TVP23C-202ENST00000419890 UHRF1BP1LA0JNW5 1464 aa9.85□□□□□ -0.83
TVP23C-202ENST00000419890 EVI5O60447 810 aa9.85□□□□□ -0.83
TVP23C-202ENST00000419890 NEFLP07196 543 aa9.84□□□□□ -0.83
TVP23C-202ENST00000419890 MRPL50Q8N5N7 158 aaKnown RBP9.84□□□□□ -0.83
TVP23C-202ENST00000419890 ZDHHC16Q969W1 377 aa9.84□□□□□ -0.83
TVP23C-202ENST00000419890 PLB1Q6P1J6 1458 aa9.84□□□□□ -0.83
TVP23C-202ENST00000419890 ARID3CA6NKF2 412 aa9.83□□□□□ -0.84
TVP23C-202ENST00000419890 PPP1R15AO75807 674 aaPredicted RBP9.83□□□□□ -0.84
TVP23C-202ENST00000419890 PDE4AP27815 886 aa9.83□□□□□ -0.84
TVP23C-202ENST00000419890 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
TVP23C-202ENST00000419890 RYDENQ9NUL5 291 aaKnown RBP9.82□□□□□ -0.84
TVP23C-202ENST00000419890 ABCC10Q5T3U5 1492 aa9.82□□□□□ -0.84
TVP23C-202ENST00000419890 CASKIN1Q8WXD9 1431 aa9.82□□□□□ -0.84
TVP23C-202ENST00000419890 PHLDB1Q86UU1 1377 aa9.81□□□□□ -0.84
TVP23C-202ENST00000419890 KIF13AQ9H1H9 1805 aa9.81□□□□□ -0.84
TVP23C-202ENST00000419890 KDM5BQ9UGL1 1544 aa9.81□□□□□ -0.84
TVP23C-202ENST00000419890 ASXL2Q76L83 1435 aa9.81□□□□□ -0.84
TVP23C-202ENST00000419890 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
TVP23C-202ENST00000419890 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
TVP23C-202ENST00000419890 FHOD3Q2V2M9 1422 aa9.8□□□□□ -0.84
TVP23C-202ENST00000419890 ABCA8O94911 1581 aa9.8□□□□□ -0.84
TVP23C-202ENST00000419890 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
TVP23C-202ENST00000419890 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
TVP23C-202ENST00000419890 ZCCHC11Q5TAX3 1644 aaKnown RBP9.78□□□□□ -0.84
TVP23C-202ENST00000419890 MFSD10Q14728 455 aa9.78□□□□□ -0.84
TVP23C-202ENST00000419890 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
TVP23C-202ENST00000419890 HFM1A2PYH4 1435 aa9.78□□□□□ -0.84
TVP23C-202ENST00000419890 AKNAQ7Z591 1439 aa9.78□□□□□ -0.84
TVP23C-202ENST00000419890 FANCIQ9NVI1 1328 aa9.78□□□□□ -0.84
TVP23C-202ENST00000419890 HECW1Q76N89 1606 aa9.78□□□□□ -0.84
TVP23C-202ENST00000419890 PTPN23Q9H3S7 1636 aa9.78□□□□□ -0.84
TVP23C-202ENST00000419890 DIP2BQ9P265 1576 aa9.77□□□□□ -0.85
TVP23C-202ENST00000419890 FMN1Q68DA7 1419 aa9.77□□□□□ -0.85
TVP23C-202ENST00000419890 ANP32CO43423 234 aa9.77□□□□□ -0.85
TVP23C-202ENST00000419890 GTPBP6O43824 516 aaPredicted RBP9.77□□□□□ -0.85
TVP23C-202ENST00000419890 EMILIN3Q9NT22 766 aa9.77□□□□□ -0.85
TVP23C-202ENST00000419890 PCDHGA10Q9Y5H3 936 aa9.77□□□□□ -0.85
TVP23C-202ENST00000419890 GCC2Q8IWJ2 1684 aa9.77□□□□□ -0.85
TVP23C-202ENST00000419890 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
TVP23C-202ENST00000419890 FGD6Q6ZV73 1430 aa9.76□□□□□ -0.85
TVP23C-202ENST00000419890 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
TVP23C-202ENST00000419890 PROX2Q3B8N5 592 aa9.76□□□□□ -0.85
TVP23C-202ENST00000419890 DDX27Q96GQ7 796 aaKnown RBP9.76□□□□□ -0.85
TVP23C-202ENST00000419890 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
TVP23C-202ENST00000419890 RABGEF1Q9UJ41 708 aa9.76□□□□□ -0.85
TVP23C-202ENST00000419890 ATP10BO94823 1461 aa9.76□□□□□ -0.85
TVP23C-202ENST00000419890 CCDC18Q5T9S5 1454 aa9.76□□□□□ -0.85
TVP23C-202ENST00000419890 ITGBL1O95965 494 aaPredicted RBP9.75□□□□□ -0.85
TVP23C-202ENST00000419890 COL9A1P20849 921 aa9.75□□□□□ -0.85
TVP23C-202ENST00000419890 POLR1AO95602 1720 aaPredicted RBP9.75□□□□□ -0.85
TVP23C-202ENST00000419890 EHBP1L1Q8N3D4 1523 aa9.75□□□□□ -0.85
TVP23C-202ENST00000419890 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
TVP23C-202ENST00000419890 NCOA2Q15596 1464 aa9.74□□□□□ -0.85
TVP23C-202ENST00000419890 EPRSP07814 1512 aaKnown RBP9.74□□□□□ -0.85
TVP23C-202ENST00000419890 BCL11AQ9H165 835 aa9.74□□□□□ -0.85
TVP23C-202ENST00000419890 RBM19Q9Y4C8 960 aaKnown RBP9.74□□□□□ -0.85
TVP23C-202ENST00000419890 SUPT6HQ7KZ85 1726 aaKnown RBP9.73□□□□□ -0.85
TVP23C-202ENST00000419890 WDR7Q9Y4E6 1490 aa9.73□□□□□ -0.85
TVP23C-202ENST00000419890 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
TVP23C-202ENST00000419890 TONSLQ96HA7 1378 aa9.73□□□□□ -0.85
TVP23C-202ENST00000419890 GLI2P10070 1586 aa9.72□□□□□ -0.85
TVP23C-202ENST00000419890 PLEKHD1A6NEE1 506 aa9.72□□□□□ -0.85
TVP23C-202ENST00000419890 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
TVP23C-202ENST00000419890 NUP153P49790 1475 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms