RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 EIF2S2P20042 333 aaKnown RBP21.41■■□□□ 1.02
SYNGAP1-202ENST00000418600 PRAM1Q96QH2 718 aa21.41■■□□□ 1.02
SYNGAP1-202ENST00000418600 VPS37DQ86XT2 251 aa21.41■■□□□ 1.02
SYNGAP1-202ENST00000418600 KIF14Q15058 1648 aa21.41■■□□□ 1.02
SYNGAP1-202ENST00000418600 XPCQ01831 940 aaPredicted RBP21.39■■□□□ 1.02
SYNGAP1-202ENST00000418600 BECN1Q14457 450 aa21.39■■□□□ 1.02
SYNGAP1-202ENST00000418600 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
SYNGAP1-202ENST00000418600 AMOTL1Q8IY63 956 aa21.38■■□□□ 1.01
SYNGAP1-202ENST00000418600 DIAPH1O60610 1272 aaKnown RBP21.38■■□□□ 1.01
SYNGAP1-202ENST00000418600 MCCP23508 829 aa21.38■■□□□ 1.01
SYNGAP1-202ENST00000418600 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
SYNGAP1-202ENST00000418600 GOLGA6L22H0YM25 854 aa21.37■■□□□ 1.01
SYNGAP1-202ENST00000418600 PANK3Q9H999 370 aa21.37■■□□□ 1.01
SYNGAP1-202ENST00000418600 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
SYNGAP1-202ENST00000418600 DDX54Q8TDD1 881 aaKnown RBP21.37■■□□□ 1.01
SYNGAP1-202ENST00000418600 DDRGK1Q96HY6 314 aa21.37■■□□□ 1.01
SYNGAP1-202ENST00000418600 GNL2Q13823 731 aaKnown RBP21.36■■□□□ 1.01
SYNGAP1-202ENST00000418600 LRRC9Q6ZRR7 1453 aa21.36■■□□□ 1.01
SYNGAP1-202ENST00000418600 DDX58O95786 925 aaKnown RBP21.35■■□□□ 1.01
SYNGAP1-202ENST00000418600 ARHGEF11O15085 1522 aa21.35■■□□□ 1.01
SYNGAP1-202ENST00000418600 LRPPRCP42704 1394 aaKnown RBP21.35■■□□□ 1.01
SYNGAP1-202ENST00000418600 KIAA1211Q6ZU35 1233 aa21.35■■□□□ 1.01
SYNGAP1-202ENST00000418600 ASXL2Q76L83 1435 aa21.34■■□□□ 1.01
SYNGAP1-202ENST00000418600 FANCAO15360 1455 aa21.34■■□□□ 1.01
SYNGAP1-202ENST00000418600 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1.01
SYNGAP1-202ENST00000418600 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
SYNGAP1-202ENST00000418600 HMMRO75330 724 aa21.32■■□□□ 1
SYNGAP1-202ENST00000418600 MSH6P52701 1360 aa21.32■■□□□ 1
SYNGAP1-202ENST00000418600 NCBP3Q53F19 620 aaKnown RBP21.32■■□□□ 1
SYNGAP1-202ENST00000418600 KIF6Q6ZMV9 814 aa21.32■■□□□ 1
SYNGAP1-202ENST00000418600 TPRNQ4KMQ1 711 aa21.32■■□□□ 1
SYNGAP1-202ENST00000418600 RPGRIP1LQ68CZ1 1315 aa21.31■■□□□ 1
SYNGAP1-202ENST00000418600 MIER1Q8N108 512 aa21.3■■□□□ 1
SYNGAP1-202ENST00000418600 CDK13Q14004 1512 aaKnown RBP21.3■■□□□ 1
SYNGAP1-202ENST00000418600 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
SYNGAP1-202ENST00000418600 TOMM22Q9NS69 142 aa21.3■■□□□ 1
SYNGAP1-202ENST00000418600 SPG7Q9UQ90 795 aa21.3■■□□□ 1
SYNGAP1-202ENST00000418600 ERBINQ96RT1 1412 aa21.3■■□□□ 1
SYNGAP1-202ENST00000418600 CDK19Q9BWU1 502 aa21.29■■□□□ 1
SYNGAP1-202ENST00000418600 RAD21O60216 631 aa21.28■■□□□ 1
SYNGAP1-202ENST00000418600 LMTK3Q96Q04 1460 aa21.28■■□□□ 1
SYNGAP1-202ENST00000418600 HSP90B1P14625 803 aaKnown RBP21.27■■□□□ 1
SYNGAP1-202ENST00000418600 VPS53Q5VIR6 699 aa21.27■■□□□ 1
SYNGAP1-202ENST00000418600 ZNF692Q9BU19 519 aaPredicted RBP21.27■■□□□ 1
SYNGAP1-202ENST00000418600 CABP4P57796 275 aa21.27■■□□□ 1
SYNGAP1-202ENST00000418600 CFAP44Q96MT7 982 aa21.26■□□□□ 0.99
SYNGAP1-202ENST00000418600 CFAP70Q5T0N1 1121 aa21.26■□□□□ 0.99
SYNGAP1-202ENST00000418600 FAM135AQ9P2D6 1515 aa21.26■□□□□ 0.99
SYNGAP1-202ENST00000418600 TNRQ92752 1358 aa21.25■□□□□ 0.99
SYNGAP1-202ENST00000418600 NECTIN2Q92692 538 aa21.25■□□□□ 0.99
SYNGAP1-202ENST00000418600 C9orf78Q9NZ63 289 aaPredicted RBP21.25■□□□□ 0.99
SYNGAP1-202ENST00000418600 FAM177BA6PVY3 158 aa21.25■□□□□ 0.99
SYNGAP1-202ENST00000418600 CCDC141Q6ZP82 1450 aa21.24■□□□□ 0.99
SYNGAP1-202ENST00000418600 RRP7AQ9Y3A4 280 aaKnown RBP21.24■□□□□ 0.99
SYNGAP1-202ENST00000418600 HSPA2P54652 639 aa21.23■□□□□ 0.99
SYNGAP1-202ENST00000418600 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
SYNGAP1-202ENST00000418600 GGNBP2Q9H3C7 697 aa21.23■□□□□ 0.99
SYNGAP1-202ENST00000418600 RGS3P49796 1198 aa21.23■□□□□ 0.99
SYNGAP1-202ENST00000418600 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
SYNGAP1-202ENST00000418600 USP47Q96K76 1375 aa21.22■□□□□ 0.99
SYNGAP1-202ENST00000418600 ZC3H6P61129 1189 aaKnown RBP21.22■□□□□ 0.99
SYNGAP1-202ENST00000418600 CADPS2Q86UW7 1296 aa21.21■□□□□ 0.99
SYNGAP1-202ENST00000418600 FBXO31Q5XUX0 539 aaPredicted RBP21.21■□□□□ 0.99
SYNGAP1-202ENST00000418600 TSPYL4Q9UJ04 414 aa21.21■□□□□ 0.99
SYNGAP1-202ENST00000418600 KIF21AQ7Z4S6 1674 aa21.2■□□□□ 0.98
SYNGAP1-202ENST00000418600 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
SYNGAP1-202ENST00000418600 AMOTL2Q9Y2J4 779 aa21.2■□□□□ 0.98
SYNGAP1-202ENST00000418600 TRIM44Q96DX7 344 aaPredicted RBP21.19■□□□□ 0.98
SYNGAP1-202ENST00000418600 ELL2O00472 640 aaPredicted RBP21.19■□□□□ 0.98
SYNGAP1-202ENST00000418600 HFM1A2PYH4 1435 aa21.18■□□□□ 0.98
SYNGAP1-202ENST00000418600 HMOX1P09601 288 aa21.17■□□□□ 0.98
SYNGAP1-202ENST00000418600 AIMP1Q12904 312 aaKnown RBP21.17■□□□□ 0.98
SYNGAP1-202ENST00000418600 WDR7Q9Y4E6 1490 aa21.17■□□□□ 0.98
SYNGAP1-202ENST00000418600 ROCK1Q13464 1354 aa21.17■□□□□ 0.98
SYNGAP1-202ENST00000418600 KCNH5Q8NCM2 988 aa21.17■□□□□ 0.98
SYNGAP1-202ENST00000418600 HSP90AB1P08238 724 aaKnown RBP21.17■□□□□ 0.98
SYNGAP1-202ENST00000418600 TRIM6-TRIM34B2RNG4 842 aa21.16■□□□□ 0.98
SYNGAP1-202ENST00000418600 C8orf37Q96NL8 207 aa21.16■□□□□ 0.98
SYNGAP1-202ENST00000418600 CCAR1Q8IX12 1150 aaKnown RBP21.16■□□□□ 0.98
SYNGAP1-202ENST00000418600 TCEAL9Q9UHQ7 104 aa21.16■□□□□ 0.98
SYNGAP1-202ENST00000418600 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
SYNGAP1-202ENST00000418600 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
SYNGAP1-202ENST00000418600 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
SYNGAP1-202ENST00000418600 MARCH6O60337 910 aa21.14■□□□□ 0.97
SYNGAP1-202ENST00000418600 LRRFIP1Q32MZ4 808 aaKnown RBP21.13■□□□□ 0.97
SYNGAP1-202ENST00000418600 NCKAP5LQ9HCH0 1330 aa21.13■□□□□ 0.97
SYNGAP1-202ENST00000418600 CABP1Q9NZU7 370 aa21.13■□□□□ 0.97
SYNGAP1-202ENST00000418600 RIPK4P57078 832 aa21.12■□□□□ 0.97
SYNGAP1-202ENST00000418600 PRXQ9BXM0 1461 aa21.12■□□□□ 0.97
SYNGAP1-202ENST00000418600 DAPK1P53355 1430 aa21.11■□□□□ 0.97
SYNGAP1-202ENST00000418600 UHRF1BP1Q6BDS2 1440 aa21.11■□□□□ 0.97
SYNGAP1-202ENST00000418600 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
SYNGAP1-202ENST00000418600 PHF8Q9UPP1 1060 aa21.11■□□□□ 0.97
SYNGAP1-202ENST00000418600 PAXIP1Q6ZW49 1069 aaPredicted RBP21.1■□□□□ 0.97
SYNGAP1-202ENST00000418600 RWDD1Q9H446 243 aaPredicted RBP21.1■□□□□ 0.97
SYNGAP1-202ENST00000418600 MYBBP1AQ9BQG0 1328 aaKnown RBP21.1■□□□□ 0.97
SYNGAP1-202ENST00000418600 GOLGA6L6A8MZA4 724 aa21.1■□□□□ 0.97
SYNGAP1-202ENST00000418600 NBR1Q14596 966 aa21.1■□□□□ 0.97
SYNGAP1-202ENST00000418600 KRT28Q7Z3Y7 464 aa21.1■□□□□ 0.97
SYNGAP1-202ENST00000418600 WDR62O43379 1518 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms