RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 KDM5AP29375 1690 aaKnown RBP14.3□□□□□ -0.12
DDB1-202ENST00000414411 ADGRB3O60242 1522 aa14.3□□□□□ -0.12
DDB1-202ENST00000414411 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
DDB1-202ENST00000414411 MYO5BQ9ULV0 1848 aa14.29□□□□□ -0.12
DDB1-202ENST00000414411 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
DDB1-202ENST00000414411 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
DDB1-202ENST00000414411 CHGAP10645 457 aaKnown RBP14.28□□□□□ -0.12
DDB1-202ENST00000414411 L3MBTL2Q969R5 705 aa14.28□□□□□ -0.12
DDB1-202ENST00000414411 CEP170BQ9Y4F5 1589 aaPredicted RBP14.27□□□□□ -0.12
DDB1-202ENST00000414411 ZNF142P52746 1687 aaPredicted RBP14.27□□□□□ -0.13
DDB1-202ENST00000414411 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
DDB1-202ENST00000414411 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
DDB1-202ENST00000414411 UHRF1BP1Q6BDS2 1440 aa14.26□□□□□ -0.13
DDB1-202ENST00000414411 RPGRIP1LQ68CZ1 1315 aa14.26□□□□□ -0.13
DDB1-202ENST00000414411 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
DDB1-202ENST00000414411 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
DDB1-202ENST00000414411 ZNF326Q5BKZ1 582 aaKnown RBP14.24□□□□□ -0.13
DDB1-202ENST00000414411 TMEM2Q9UHN6 1383 aa14.24□□□□□ -0.13
DDB1-202ENST00000414411 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
DDB1-202ENST00000414411 STAC3Q96MF2 364 aa14.23□□□□□ -0.13
DDB1-202ENST00000414411 ZFYVE9O95405 1425 aa14.22□□□□□ -0.13
DDB1-202ENST00000414411 ARHGAP23Q9P227 1491 aa14.22□□□□□ -0.13
DDB1-202ENST00000414411 IFT172Q9UG01 1749 aa14.22□□□□□ -0.13
DDB1-202ENST00000414411 SLIT1O75093 1534 aa14.22□□□□□ -0.13
DDB1-202ENST00000414411 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
DDB1-202ENST00000414411 PPP1R15AO75807 674 aaPredicted RBP14.22□□□□□ -0.13
DDB1-202ENST00000414411 PPLO60437 1756 aa14.22□□□□□ -0.13
DDB1-202ENST00000414411 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
DDB1-202ENST00000414411 RIMS2Q9UQ26 1411 aa14.21□□□□□ -0.14
DDB1-202ENST00000414411 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
DDB1-202ENST00000414411 VGFO15240 615 aaPredicted RBP14.19□□□□□ -0.14
DDB1-202ENST00000414411 LTKP29376 864 aa14.19□□□□□ -0.14
DDB1-202ENST00000414411 HDGFP51858 240 aaKnown RBP14.19□□□□□ -0.14
DDB1-202ENST00000414411 MYOM2P54296 1465 aa14.19□□□□□ -0.14
DDB1-202ENST00000414411 NUTM2DQ5VT03 806 aaPredicted RBP14.19□□□□□ -0.14
DDB1-202ENST00000414411 ADGRF5Q8IZF2 1346 aa14.19□□□□□ -0.14
DDB1-202ENST00000414411 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.19□□□□□ -0.14
DDB1-202ENST00000414411 NRXN1Q9ULB1 1477 aa14.18□□□□□ -0.14
DDB1-202ENST00000414411 TXNDC2Q86VQ3 553 aa14.17□□□□□ -0.14
DDB1-202ENST00000414411 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
DDB1-202ENST00000414411 NBPF8Q3BBV2 869 aa14.17□□□□□ -0.14
DDB1-202ENST00000414411 EID1Q9Y6B2 187 aa14.16□□□□□ -0.14
DDB1-202ENST00000414411 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
DDB1-202ENST00000414411 HSPA2P54652 639 aa14.15□□□□□ -0.14
DDB1-202ENST00000414411 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
DDB1-202ENST00000414411 SCAF11Q99590 1463 aaKnown RBP14.14□□□□□ -0.15
DDB1-202ENST00000414411 PIK3C2GO75747 1445 aa14.14□□□□□ -0.15
DDB1-202ENST00000414411 PLEKHG1Q9ULL1 1385 aa14.13□□□□□ -0.15
DDB1-202ENST00000414411 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
DDB1-202ENST00000414411 MED14O60244 1454 aa14.12□□□□□ -0.15
DDB1-202ENST00000414411 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
DDB1-202ENST00000414411 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
DDB1-202ENST00000414411 NRXN3Q9Y4C0 1643 aa14.1□□□□□ -0.15
DDB1-202ENST00000414411 SETBP1Q9Y6X0 1596 aa14.1□□□□□ -0.15
DDB1-202ENST00000414411 CENPBP07199 599 aaPredicted RBP14.1□□□□□ -0.15
DDB1-202ENST00000414411 CFAP70Q5T0N1 1121 aa14.1□□□□□ -0.15
DDB1-202ENST00000414411 STRCQ7RTU9 1775 aa14.1□□□□□ -0.15
DDB1-202ENST00000414411 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
DDB1-202ENST00000414411 POLR1AO95602 1720 aaPredicted RBP14.09□□□□□ -0.15
DDB1-202ENST00000414411 ADAMTS13Q76LX8 1427 aa14.09□□□□□ -0.15
DDB1-202ENST00000414411 KIAA1210Q9ULL0 1709 aa14.09□□□□□ -0.15
DDB1-202ENST00000414411 MIER1Q8N108 512 aa14.09□□□□□ -0.15
DDB1-202ENST00000414411 TRPM1Q7Z4N2 1603 aa14.08□□□□□ -0.15
DDB1-202ENST00000414411 NBPF1Q3BBV0 1214 aa14.08□□□□□ -0.16
DDB1-202ENST00000414411 ALKQ9UM73 1620 aa14.08□□□□□ -0.16
DDB1-202ENST00000414411 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
DDB1-202ENST00000414411 TBX22Q9Y458 520 aa14.07□□□□□ -0.16
DDB1-202ENST00000414411 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
DDB1-202ENST00000414411 RALGAPBQ86X10 1494 aa14.07□□□□□ -0.16
DDB1-202ENST00000414411 SETD1AO15047 1707 aaKnown RBP14.06□□□□□ -0.16
DDB1-202ENST00000414411 GPRASP1Q5JY77 1395 aa14.06□□□□□ -0.16
DDB1-202ENST00000414411 SLC26A8Q96RN1 970 aa14.06□□□□□ -0.16
DDB1-202ENST00000414411 LAMC1P11047 1609 aa14.06□□□□□ -0.16
DDB1-202ENST00000414411 ADGRB1O14514 1584 aa14.05□□□□□ -0.16
DDB1-202ENST00000414411 BCANQ96GW7 911 aa14.05□□□□□ -0.16
DDB1-202ENST00000414411 TMEM132EQ6IEE7 984 aa14.04□□□□□ -0.16
DDB1-202ENST00000414411 METP08581 1390 aa14.04□□□□□ -0.16
DDB1-202ENST00000414411 ROCK2O75116 1388 aaKnown RBP14.03□□□□□ -0.16
DDB1-202ENST00000414411 ASXL1Q8IXJ9 1541 aa14.03□□□□□ -0.16
DDB1-202ENST00000414411 DIP2AQ14689 1571 aa14.03□□□□□ -0.16
DDB1-202ENST00000414411 CARD11Q9BXL7 1154 aa14.01□□□□□ -0.17
DDB1-202ENST00000414411 PIK3R4Q99570 1358 aa14□□□□□ -0.17
DDB1-202ENST00000414411 PTPRUQ92729 1446 aa13.99□□□□□ -0.17
DDB1-202ENST00000414411 YTHDC2Q9H6S0 1430 aaKnown RBP13.99□□□□□ -0.17
DDB1-202ENST00000414411 LRPPRCP42704 1394 aaKnown RBP13.98□□□□□ -0.17
DDB1-202ENST00000414411 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
DDB1-202ENST00000414411 CHD2O14647 1828 aaKnown RBP13.98□□□□□ -0.17
DDB1-202ENST00000414411 AMOTL2Q9Y2J4 779 aa13.97□□□□□ -0.17
DDB1-202ENST00000414411 TECPR2O15040 1411 aa13.97□□□□□ -0.17
DDB1-202ENST00000414411 STK26Q9P289 416 aa13.96□□□□□ -0.17
DDB1-202ENST00000414411 KCNA6P17658 529 aa13.96□□□□□ -0.18
DDB1-202ENST00000414411 SIRT1Q96EB6 747 aa13.96□□□□□ -0.18
DDB1-202ENST00000414411 TRAK1Q9UPV9 953 aa13.96□□□□□ -0.18
DDB1-202ENST00000414411 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
DDB1-202ENST00000414411 USP47Q96K76 1375 aa13.95□□□□□ -0.18
DDB1-202ENST00000414411 XRN1Q8IZH2 1706 aaKnown RBP13.94□□□□□ -0.18
DDB1-202ENST00000414411 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
DDB1-202ENST00000414411 EIF4G2P78344 907 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDB1-202ENST00000414411 DLC1Q96QB1 1528 aa13.94□□□□□ -0.18
DDB1-202ENST00000414411 PRKCSHP14314 528 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms