RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 IQGAP1P46940 1657 aa21.68■■□□□ 1.06
CHD1-202ENST00000414220 FBXO41Q8TF61 875 aa21.67■■□□□ 1.06
CHD1-202ENST00000414220 FOXD1Q16676 465 aa21.66■■□□□ 1.06
CHD1-202ENST00000414220 CCDC144AA2RUR9 1427 aa21.64■■□□□ 1.06
CHD1-202ENST00000414220 ZFYVE9O95405 1425 aa21.63■■□□□ 1.05
CHD1-202ENST00000414220 PLEKHG1Q9ULL1 1385 aa21.63■■□□□ 1.05
CHD1-202ENST00000414220 LTBP4Q8N2S1 1624 aa21.62■■□□□ 1.05
CHD1-202ENST00000414220 NUTM2DQ5VT03 806 aaPredicted RBP21.62■■□□□ 1.05
CHD1-202ENST00000414220 SLC26A8Q96RN1 970 aa21.62■■□□□ 1.05
CHD1-202ENST00000414220 RPGRIP1LQ68CZ1 1315 aa21.61■■□□□ 1.05
CHD1-202ENST00000414220 CPS1P31327 1500 aa21.61■■□□□ 1.05
CHD1-202ENST00000414220 IQSEC2Q5JU85 1478 aa21.6■■□□□ 1.05
CHD1-202ENST00000414220 TRIM26Q12899 539 aaPredicted RBP21.6■■□□□ 1.05
CHD1-202ENST00000414220 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
CHD1-202ENST00000414220 VGFO15240 615 aaPredicted RBP21.59■■□□□ 1.05
CHD1-202ENST00000414220 ILDR1Q86SU0 546 aaPredicted RBP21.58■■□□□ 1.05
CHD1-202ENST00000414220 TBX22Q9Y458 520 aa21.58■■□□□ 1.05
CHD1-202ENST00000414220 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
CHD1-202ENST00000414220 KIF1BO60333 1816 aa21.57■■□□□ 1.04
CHD1-202ENST00000414220 MYO5BQ9ULV0 1848 aa21.57■■□□□ 1.04
CHD1-202ENST00000414220 KCNA6P17658 529 aa21.56■■□□□ 1.04
CHD1-202ENST00000414220 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
CHD1-202ENST00000414220 TOM1O60784 492 aa21.51■■□□□ 1.03
CHD1-202ENST00000414220 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
CHD1-202ENST00000414220 UBAP1LF5GYI3 381 aa21.5■■□□□ 1.03
CHD1-202ENST00000414220 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
CHD1-202ENST00000414220 DIP2AQ14689 1571 aa21.48■■□□□ 1.03
CHD1-202ENST00000414220 ANKRD30BQ9BXX2 1392 aa21.47■■□□□ 1.03
CHD1-202ENST00000414220 ADAMTS13Q76LX8 1427 aa21.46■■□□□ 1.03
CHD1-202ENST00000414220 NEXMIFQ5QGS0 1516 aa21.46■■□□□ 1.03
CHD1-202ENST00000414220 LRRC7Q96NW7 1537 aa21.45■■□□□ 1.02
CHD1-202ENST00000414220 SPATA31E1Q6ZUB1 1445 aa21.44■■□□□ 1.02
CHD1-202ENST00000414220 NKTRP30414 1462 aaKnown RBP21.43■■□□□ 1.02
CHD1-202ENST00000414220 AMOTL2Q9Y2J4 779 aa21.42■■□□□ 1.02
CHD1-202ENST00000414220 SETBP1Q9Y6X0 1596 aa21.42■■□□□ 1.02
CHD1-202ENST00000414220 TMEM94Q12767 1356 aa21.4■■□□□ 1.02
CHD1-202ENST00000414220 SCAF1Q9H7N4 1312 aaKnown RBP21.4■■□□□ 1.02
CHD1-202ENST00000414220 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
CHD1-202ENST00000414220 STAC3Q96MF2 364 aa21.4■■□□□ 1.02
CHD1-202ENST00000414220 NWD1Q149M9 1564 aa21.38■■□□□ 1.01
CHD1-202ENST00000414220 STRCP1A6NGW2 1772 aa21.38■■□□□ 1.01
CHD1-202ENST00000414220 NCOA3Q9Y6Q9 1424 aa21.37■■□□□ 1.01
CHD1-202ENST00000414220 ADGRF5Q8IZF2 1346 aa21.36■■□□□ 1.01
CHD1-202ENST00000414220 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
CHD1-202ENST00000414220 MSH6P52701 1360 aa21.36■■□□□ 1.01
CHD1-202ENST00000414220 CHD2O14647 1828 aaKnown RBP21.35■■□□□ 1.01
CHD1-202ENST00000414220 PPLO60437 1756 aa21.35■■□□□ 1.01
CHD1-202ENST00000414220 METP08581 1390 aa21.35■■□□□ 1.01
CHD1-202ENST00000414220 DCAF11Q8TEB1 546 aa21.33■■□□□ 1.01
CHD1-202ENST00000414220 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1.01
CHD1-202ENST00000414220 NRXN3Q9Y4C0 1643 aa21.32■■□□□ 1
CHD1-202ENST00000414220 ALKQ9UM73 1620 aa21.31■■□□□ 1
CHD1-202ENST00000414220 KDM2AQ9Y2K7 1162 aa21.31■■□□□ 1
CHD1-202ENST00000414220 PTPRUQ92729 1446 aa21.3■■□□□ 1
CHD1-202ENST00000414220 ATF3P18847 181 aa21.3■■□□□ 1
CHD1-202ENST00000414220 C19orf44Q9H6X5 657 aa21.3■■□□□ 1
CHD1-202ENST00000414220 MYOM2P54296 1465 aa21.29■■□□□ 1
CHD1-202ENST00000414220 CADPS2Q86UW7 1296 aa21.28■■□□□ 1
CHD1-202ENST00000414220 C14orf93Q9H972 538 aaKnown RBP21.28■■□□□ 1
CHD1-202ENST00000414220 PIK3C2GO75747 1445 aa21.28■■□□□ 1
CHD1-202ENST00000414220 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
CHD1-202ENST00000414220 DHX57Q6P158 1386 aaKnown RBP21.24■□□□□ 0.99
CHD1-202ENST00000414220 STK26Q9P289 416 aa21.24■□□□□ 0.99
CHD1-202ENST00000414220 NEUROD1Q13562 356 aa21.23■□□□□ 0.99
CHD1-202ENST00000414220 CFAP70Q5T0N1 1121 aa21.23■□□□□ 0.99
CHD1-202ENST00000414220 SLAIN2Q9P270 581 aa21.23■□□□□ 0.99
CHD1-202ENST00000414220 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
CHD1-202ENST00000414220 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
CHD1-202ENST00000414220 XRN1Q8IZH2 1706 aaKnown RBP21.22■□□□□ 0.99
CHD1-202ENST00000414220 TMEM132EQ6IEE7 984 aa21.22■□□□□ 0.99
CHD1-202ENST00000414220 PCGF6Q9BYE7 350 aa21.22■□□□□ 0.99
CHD1-202ENST00000414220 LRPPRCP42704 1394 aaKnown RBP21.22■□□□□ 0.99
CHD1-202ENST00000414220 XIRP1Q702N8 1843 aaKnown RBP21.2■□□□□ 0.98
CHD1-202ENST00000414220 SIN3AQ96ST3 1273 aa21.2■□□□□ 0.98
CHD1-202ENST00000414220 ABCC11Q96J66 1382 aa21.2■□□□□ 0.98
CHD1-202ENST00000414220 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
CHD1-202ENST00000414220 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
CHD1-202ENST00000414220 ROBO2Q9HCK4 1378 aa21.18■□□□□ 0.98
CHD1-202ENST00000414220 DCCP43146 1447 aa21.18■□□□□ 0.98
CHD1-202ENST00000414220 PRAG1Q86YV5 1406 aa21.18■□□□□ 0.98
CHD1-202ENST00000414220 LAMC1P11047 1609 aa21.18■□□□□ 0.98
CHD1-202ENST00000414220 HSPA1LP34931 641 aa21.17■□□□□ 0.98
CHD1-202ENST00000414220 YTHDC2Q9H6S0 1430 aaKnown RBP21.17■□□□□ 0.98
CHD1-202ENST00000414220 SETD1AO15047 1707 aaKnown RBP21.17■□□□□ 0.98
CHD1-202ENST00000414220 ADGRL3Q9HAR2 1447 aa21.16■□□□□ 0.98
CHD1-202ENST00000414220 TECPR2O15040 1411 aa21.14■□□□□ 0.98
CHD1-202ENST00000414220 L3MBTL2Q969R5 705 aa21.14■□□□□ 0.97
CHD1-202ENST00000414220 POGKQ9P215 609 aa21.14■□□□□ 0.97
CHD1-202ENST00000414220 WAPLQ7Z5K2 1190 aa21.12■□□□□ 0.97
CHD1-202ENST00000414220 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
CHD1-202ENST00000414220 TRAK1Q9UPV9 953 aa21.1■□□□□ 0.97
CHD1-202ENST00000414220 TONSLQ96HA7 1378 aa21.1■□□□□ 0.97
CHD1-202ENST00000414220 PRAM1Q96QH2 718 aa21.08■□□□□ 0.97
CHD1-202ENST00000414220 ASXL1Q8IXJ9 1541 aa21.08■□□□□ 0.96
CHD1-202ENST00000414220 KNDC1Q76NI1 1749 aa21.06■□□□□ 0.96
CHD1-202ENST00000414220 ROBO1Q9Y6N7 1651 aa21.05■□□□□ 0.96
CHD1-202ENST00000414220 MST1RQ04912 1400 aa21.04■□□□□ 0.96
CHD1-202ENST00000414220 BRINP3Q76B58 766 aa21.04■□□□□ 0.96
CHD1-202ENST00000414220 DLC1Q96QB1 1528 aa21.04■□□□□ 0.96
CHD1-202ENST00000414220 ADGRB1O14514 1584 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms