RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF622Q969S3 477 aaKnown RBP eCLIP18.87■□□□□ 0.614e-9■■■■■ 36.8
CHD1-202ENST00000414220 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.57■□□□□ 0.243e-7■■■■■ 35.2
CHD1-202ENST00000414220 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.228e-7■■■■■ 29.8
CHD1-202ENST00000414220 TARDBPQ13148 414 aaKnown RBP eCLIP14.51□□□□□ -0.093e-8■■■■■ 28.2
CHD1-202ENST00000414220 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.82■□□□□ 0.764e-8■■■□□ 18.7
CHD1-202ENST00000414220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.042e-10■■■□□ 15.7
CHD1-202ENST00000414220 PUM1Q14671 1186 aaKnown RBP eCLIP14.93□□□□□ -0.029e-8■■□□□ 13
Retrieved 7 of 7 RNA–protein pairs in 11.5 ms