RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 IQGAP1P46940 1657 aa15□□□□□ -0.01
TMEM248-202ENST00000413593 SPHKAPQ2M3C7 1700 aa15□□□□□ -0.01
TMEM248-202ENST00000413593 RIMS2Q9UQ26 1411 aa15□□□□□ -0.01
TMEM248-202ENST00000413593 ILDR1Q86SU0 546 aaPredicted RBP14.98□□□□□ -0.01
TMEM248-202ENST00000413593 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
TMEM248-202ENST00000413593 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
TMEM248-202ENST00000413593 CLTCL1P53675 1640 aa14.96□□□□□ -0.01
TMEM248-202ENST00000413593 PPP1R15AO75807 674 aaPredicted RBP14.96□□□□□ -0.01
TMEM248-202ENST00000413593 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.96□□□□□ -0.01
TMEM248-202ENST00000413593 PLEKHG1Q9ULL1 1385 aa14.96□□□□□ -0.02
TMEM248-202ENST00000413593 HRCP23327 699 aa14.95□□□□□ -0.02
TMEM248-202ENST00000413593 IQSEC2Q5JU85 1478 aa14.95□□□□□ -0.02
TMEM248-202ENST00000413593 CPS1P31327 1500 aa14.94□□□□□ -0.02
TMEM248-202ENST00000413593 NUTM2DQ5VT03 806 aaPredicted RBP14.94□□□□□ -0.02
TMEM248-202ENST00000413593 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
TMEM248-202ENST00000413593 ZNF326Q5BKZ1 582 aaKnown RBP14.93□□□□□ -0.02
TMEM248-202ENST00000413593 MYO5BQ9ULV0 1848 aa14.92□□□□□ -0.02
TMEM248-202ENST00000413593 BCANQ96GW7 911 aa14.92□□□□□ -0.02
TMEM248-202ENST00000413593 CCDC144AA2RUR9 1427 aa14.92□□□□□ -0.02
TMEM248-202ENST00000413593 TBX22Q9Y458 520 aa14.89□□□□□ -0.03
TMEM248-202ENST00000413593 ADAMTS13Q76LX8 1427 aa14.89□□□□□ -0.03
TMEM248-202ENST00000413593 NEXMIFQ5QGS0 1516 aa14.88□□□□□ -0.03
TMEM248-202ENST00000413593 KCNA6P17658 529 aa14.88□□□□□ -0.03
TMEM248-202ENST00000413593 LRRC7Q96NW7 1537 aa14.87□□□□□ -0.03
TMEM248-202ENST00000413593 RPGRIP1LQ68CZ1 1315 aa14.87□□□□□ -0.03
TMEM248-202ENST00000413593 STRCP1A6NGW2 1772 aa14.86□□□□□ -0.03
TMEM248-202ENST00000413593 SPATA31E1Q6ZUB1 1445 aa14.86□□□□□ -0.03
TMEM248-202ENST00000413593 DIP2AQ14689 1571 aa14.85□□□□□ -0.03
TMEM248-202ENST00000413593 KIF1BO60333 1816 aa14.85□□□□□ -0.03
TMEM248-202ENST00000413593 ANKRD30BQ9BXX2 1392 aa14.85□□□□□ -0.03
TMEM248-202ENST00000413593 UBAP1LF5GYI3 381 aa14.84□□□□□ -0.03
TMEM248-202ENST00000413593 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
TMEM248-202ENST00000413593 SETBP1Q9Y6X0 1596 aa14.84□□□□□ -0.03
TMEM248-202ENST00000413593 PIK3R4Q99570 1358 aa14.84□□□□□ -0.03
TMEM248-202ENST00000413593 NWD1Q149M9 1564 aa14.83□□□□□ -0.04
TMEM248-202ENST00000413593 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
TMEM248-202ENST00000413593 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
TMEM248-202ENST00000413593 RGL3Q3MIN7 710 aa14.82□□□□□ -0.04
TMEM248-202ENST00000413593 TMEM94Q12767 1356 aa14.82□□□□□ -0.04
TMEM248-202ENST00000413593 TRIM26Q12899 539 aaPredicted RBP14.81□□□□□ -0.04
TMEM248-202ENST00000413593 PROSER2Q86WR7 435 aaPredicted RBP14.81□□□□□ -0.04
TMEM248-202ENST00000413593 TOM1O60784 492 aa14.79□□□□□ -0.04
TMEM248-202ENST00000413593 METP08581 1390 aa14.79□□□□□ -0.04
TMEM248-202ENST00000413593 PTPRUQ92729 1446 aa14.79□□□□□ -0.04
TMEM248-202ENST00000413593 ADGRF5Q8IZF2 1346 aa14.78□□□□□ -0.04
TMEM248-202ENST00000413593 RBM33Q96EV2 1170 aaKnown RBP14.78□□□□□ -0.04
TMEM248-202ENST00000413593 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
TMEM248-202ENST00000413593 PPLO60437 1756 aa14.76□□□□□ -0.05
TMEM248-202ENST00000413593 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
TMEM248-202ENST00000413593 CHD2O14647 1828 aaKnown RBP14.76□□□□□ -0.05
TMEM248-202ENST00000413593 PIP4K2BP78356 416 aa14.74□□□□□ -0.05
TMEM248-202ENST00000413593 NCOA3Q9Y6Q9 1424 aa14.74□□□□□ -0.05
TMEM248-202ENST00000413593 XRN1Q8IZH2 1706 aaKnown RBP14.73□□□□□ -0.05
TMEM248-202ENST00000413593 PIK3C2GO75747 1445 aa14.73□□□□□ -0.05
TMEM248-202ENST00000413593 IFT172Q9UG01 1749 aa14.72□□□□□ -0.05
TMEM248-202ENST00000413593 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
TMEM248-202ENST00000413593 MYOM2P54296 1465 aa14.72□□□□□ -0.05
TMEM248-202ENST00000413593 NRXN1Q9ULB1 1477 aa14.72□□□□□ -0.05
TMEM248-202ENST00000413593 XIRP1Q702N8 1843 aaKnown RBP14.72□□□□□ -0.05
TMEM248-202ENST00000413593 MSH6P52701 1360 aa14.72□□□□□ -0.05
TMEM248-202ENST00000413593 SETD1AO15047 1707 aaKnown RBP14.7□□□□□ -0.06
TMEM248-202ENST00000413593 PRAG1Q86YV5 1406 aa14.7□□□□□ -0.06
TMEM248-202ENST00000413593 C14orf37Q86TY3 774 aa14.7□□□□□ -0.06
TMEM248-202ENST00000413593 DHX57Q6P158 1386 aaKnown RBP14.69□□□□□ -0.06
TMEM248-202ENST00000413593 PTCH1Q13635 1447 aa14.68□□□□□ -0.06
TMEM248-202ENST00000413593 DCAF11Q8TEB1 546 aa14.68□□□□□ -0.06
TMEM248-202ENST00000413593 C19orf44Q9H6X5 657 aa14.68□□□□□ -0.06
TMEM248-202ENST00000413593 C14orf93Q9H972 538 aaKnown RBP14.68□□□□□ -0.06
TMEM248-202ENST00000413593 HSPA1LP34931 641 aa14.67□□□□□ -0.06
TMEM248-202ENST00000413593 STAC3Q96MF2 364 aa14.67□□□□□ -0.06
TMEM248-202ENST00000413593 ROBO2Q9HCK4 1378 aa14.67□□□□□ -0.06
TMEM248-202ENST00000413593 ASXL1Q8IXJ9 1541 aa14.66□□□□□ -0.06
TMEM248-202ENST00000413593 LRPPRCP42704 1394 aaKnown RBP14.66□□□□□ -0.06
TMEM248-202ENST00000413593 CFAP70Q5T0N1 1121 aa14.66□□□□□ -0.06
TMEM248-202ENST00000413593 TMEM132EQ6IEE7 984 aa14.66□□□□□ -0.06
TMEM248-202ENST00000413593 KDM2AQ9Y2K7 1162 aa14.66□□□□□ -0.06
TMEM248-202ENST00000413593 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
TMEM248-202ENST00000413593 CADPS2Q86UW7 1296 aa14.65□□□□□ -0.06
TMEM248-202ENST00000413593 SLAIN2Q9P270 581 aa14.65□□□□□ -0.06
TMEM248-202ENST00000413593 TECPR2O15040 1411 aa14.65□□□□□ -0.06
TMEM248-202ENST00000413593 ADGRL3Q9HAR2 1447 aa14.65□□□□□ -0.06
TMEM248-202ENST00000413593 ABCC11Q96J66 1382 aa14.64□□□□□ -0.07
TMEM248-202ENST00000413593 ATF3P18847 181 aa14.64□□□□□ -0.07
TMEM248-202ENST00000413593 DCCP43146 1447 aa14.64□□□□□ -0.07
TMEM248-202ENST00000413593 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
TMEM248-202ENST00000413593 STK26Q9P289 416 aa14.63□□□□□ -0.07
TMEM248-202ENST00000413593 YTHDC2Q9H6S0 1430 aaKnown RBP14.63□□□□□ -0.07
TMEM248-202ENST00000413593 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.61□□□□□ -0.07
TMEM248-202ENST00000413593 LAMC1P11047 1609 aa14.61□□□□□ -0.07
TMEM248-202ENST00000413593 ADGRB1O14514 1584 aa14.6□□□□□ -0.07
TMEM248-202ENST00000413593 WAPLQ7Z5K2 1190 aa14.59□□□□□ -0.07
TMEM248-202ENST00000413593 SIRT1Q96EB6 747 aa14.59□□□□□ -0.07
TMEM248-202ENST00000413593 PLEKHH1Q9ULM0 1364 aa14.59□□□□□ -0.07
TMEM248-202ENST00000413593 MST1RQ04912 1400 aa14.58□□□□□ -0.07
TMEM248-202ENST00000413593 NEUROD1Q13562 356 aa14.58□□□□□ -0.08
TMEM248-202ENST00000413593 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.08
TMEM248-202ENST00000413593 ROBO1Q9Y6N7 1651 aa14.58□□□□□ -0.08
TMEM248-202ENST00000413593 NALCNQ8IZF0 1738 aa14.58□□□□□ -0.08
TMEM248-202ENST00000413593 KNDC1Q76NI1 1749 aa14.56□□□□□ -0.08
TMEM248-202ENST00000413593 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms