RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-202ENST00000412686 TMEM2Q9UHN6 1383 aa11.46□□□□□ -0.57
CPSF4-202ENST00000412686 LTKP29376 864 aa11.46□□□□□ -0.57
CPSF4-202ENST00000412686 IQGAP1P46940 1657 aa11.45□□□□□ -0.58
CPSF4-202ENST00000412686 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
CPSF4-202ENST00000412686 ANKLE2Q86XL3 938 aa11.44□□□□□ -0.58
CPSF4-202ENST00000412686 KIF1BO60333 1816 aa11.44□□□□□ -0.58
CPSF4-202ENST00000412686 NPHP4O75161 1426 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-202ENST00000412686 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-202ENST00000412686 TXNDC2Q86VQ3 553 aa11.43□□□□□ -0.58
CPSF4-202ENST00000412686 MED14O60244 1454 aa11.43□□□□□ -0.58
CPSF4-202ENST00000412686 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
CPSF4-202ENST00000412686 RIMS2Q9UQ26 1411 aa11.43□□□□□ -0.58
CPSF4-202ENST00000412686 HRCP23327 699 aa11.41□□□□□ -0.58
CPSF4-202ENST00000412686 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-202ENST00000412686 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
CPSF4-202ENST00000412686 CCDC144AA2RUR9 1427 aa11.4□□□□□ -0.58
CPSF4-202ENST00000412686 NEXMIFQ5QGS0 1516 aa11.4□□□□□ -0.59
CPSF4-202ENST00000412686 ACIN1Q9UKV3 1341 aaKnown RBP11.39□□□□□ -0.59
CPSF4-202ENST00000412686 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
CPSF4-202ENST00000412686 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
CPSF4-202ENST00000412686 STRCP1A6NGW2 1772 aa11.39□□□□□ -0.59
CPSF4-202ENST00000412686 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
CPSF4-202ENST00000412686 ANKRD30BQ9BXX2 1392 aa11.38□□□□□ -0.59
CPSF4-202ENST00000412686 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
CPSF4-202ENST00000412686 PPP1R15AO75807 674 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-202ENST00000412686 SLC26A8Q96RN1 970 aa11.37□□□□□ -0.59
CPSF4-202ENST00000412686 NRXN3Q9Y4C0 1643 aa11.37□□□□□ -0.59
CPSF4-202ENST00000412686 PPLO60437 1756 aa11.36□□□□□ -0.59
CPSF4-202ENST00000412686 IFT172Q9UG01 1749 aa11.36□□□□□ -0.59
CPSF4-202ENST00000412686 RGL3Q3MIN7 710 aa11.36□□□□□ -0.59
CPSF4-202ENST00000412686 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
CPSF4-202ENST00000412686 BCANQ96GW7 911 aa11.35□□□□□ -0.59
CPSF4-202ENST00000412686 PLEKHG1Q9ULL1 1385 aa11.35□□□□□ -0.59
CPSF4-202ENST00000412686 ADAMTS13Q76LX8 1427 aa11.35□□□□□ -0.59
CPSF4-202ENST00000412686 DHX57Q6P158 1386 aaKnown RBP11.34□□□□□ -0.59
CPSF4-202ENST00000412686 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.33□□□□□ -0.6
CPSF4-202ENST00000412686 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
CPSF4-202ENST00000412686 HDGFP51858 240 aaKnown RBP11.32□□□□□ -0.6
CPSF4-202ENST00000412686 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
CPSF4-202ENST00000412686 CERKQ8TCT0 537 aa11.31□□□□□ -0.6
CPSF4-202ENST00000412686 ADGRF5Q8IZF2 1346 aa11.31□□□□□ -0.6
CPSF4-202ENST00000412686 NWD1Q149M9 1564 aa11.3□□□□□ -0.6
CPSF4-202ENST00000412686 CPS1P31327 1500 aa11.3□□□□□ -0.6
CPSF4-202ENST00000412686 DIP2AQ14689 1571 aa11.29□□□□□ -0.6
CPSF4-202ENST00000412686 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
CPSF4-202ENST00000412686 CHD2O14647 1828 aaKnown RBP11.29□□□□□ -0.6
CPSF4-202ENST00000412686 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
CPSF4-202ENST00000412686 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
CPSF4-202ENST00000412686 METP08581 1390 aa11.28□□□□□ -0.6
CPSF4-202ENST00000412686 ALKQ9UM73 1620 aa11.28□□□□□ -0.6
CPSF4-202ENST00000412686 PTPRUQ92729 1446 aa11.28□□□□□ -0.6
CPSF4-202ENST00000412686 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
CPSF4-202ENST00000412686 TBX22Q9Y458 520 aa11.28□□□□□ -0.6
CPSF4-202ENST00000412686 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
CPSF4-202ENST00000412686 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
CPSF4-202ENST00000412686 XRN1Q8IZH2 1706 aaKnown RBP11.26□□□□□ -0.61
CPSF4-202ENST00000412686 MYOM2P54296 1465 aa11.26□□□□□ -0.61
CPSF4-202ENST00000412686 ASXL1Q8IXJ9 1541 aa11.26□□□□□ -0.61
CPSF4-202ENST00000412686 KCNA6P17658 529 aa11.26□□□□□ -0.61
CPSF4-202ENST00000412686 PIK3C2GO75747 1445 aa11.26□□□□□ -0.61
CPSF4-202ENST00000412686 NEUROD1Q13562 356 aa11.25□□□□□ -0.61
CPSF4-202ENST00000412686 KDM2AQ9Y2K7 1162 aa11.25□□□□□ -0.61
CPSF4-202ENST00000412686 NKTRP30414 1462 aaKnown RBP11.25□□□□□ -0.61
CPSF4-202ENST00000412686 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
CPSF4-202ENST00000412686 DCAF11Q8TEB1 546 aa11.24□□□□□ -0.61
CPSF4-202ENST00000412686 IQSEC2Q5JU85 1478 aa11.24□□□□□ -0.61
CPSF4-202ENST00000412686 AMOTL2Q9Y2J4 779 aa11.23□□□□□ -0.61
CPSF4-202ENST00000412686 TMEM94Q12767 1356 aa11.23□□□□□ -0.61
CPSF4-202ENST00000412686 PIK3R4Q99570 1358 aa11.23□□□□□ -0.61
CPSF4-202ENST00000412686 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
CPSF4-202ENST00000412686 TMEM132EQ6IEE7 984 aa11.22□□□□□ -0.61
CPSF4-202ENST00000412686 PROSER2Q86WR7 435 aaPredicted RBP11.22□□□□□ -0.61
CPSF4-202ENST00000412686 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
CPSF4-202ENST00000412686 LAMC1P11047 1609 aa11.2□□□□□ -0.62
CPSF4-202ENST00000412686 FBXO41Q8TF61 875 aa11.2□□□□□ -0.62
CPSF4-202ENST00000412686 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
CPSF4-202ENST00000412686 UBAP1LF5GYI3 381 aa11.19□□□□□ -0.62
CPSF4-202ENST00000412686 C14orf93Q9H972 538 aaKnown RBP11.19□□□□□ -0.62
CPSF4-202ENST00000412686 KNDC1Q76NI1 1749 aa11.18□□□□□ -0.62
CPSF4-202ENST00000412686 NALCNQ8IZF0 1738 aa11.18□□□□□ -0.62
CPSF4-202ENST00000412686 ROBO2Q9HCK4 1378 aa11.18□□□□□ -0.62
CPSF4-202ENST00000412686 STK26Q9P289 416 aa11.18□□□□□ -0.62
CPSF4-202ENST00000412686 ADGRB1O14514 1584 aa11.18□□□□□ -0.62
CPSF4-202ENST00000412686 PRAG1Q86YV5 1406 aa11.18□□□□□ -0.62
CPSF4-202ENST00000412686 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-202ENST00000412686 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
CPSF4-202ENST00000412686 YTHDC2Q9H6S0 1430 aaKnown RBP11.17□□□□□ -0.62
CPSF4-202ENST00000412686 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
CPSF4-202ENST00000412686 PLEKHH1Q9ULM0 1364 aa11.16□□□□□ -0.62
CPSF4-202ENST00000412686 C14orf37Q86TY3 774 aa11.16□□□□□ -0.62
CPSF4-202ENST00000412686 PIP4K2BP78356 416 aa11.15□□□□□ -0.62
CPSF4-202ENST00000412686 TECPR2O15040 1411 aa11.15□□□□□ -0.62
CPSF4-202ENST00000412686 MSH6P52701 1360 aa11.15□□□□□ -0.63
CPSF4-202ENST00000412686 NBPF1Q3BBV0 1214 aa11.14□□□□□ -0.63
CPSF4-202ENST00000412686 WAPLQ7Z5K2 1190 aa11.14□□□□□ -0.63
CPSF4-202ENST00000412686 KIAA1210Q9ULL0 1709 aa11.14□□□□□ -0.63
CPSF4-202ENST00000412686 TONSLQ96HA7 1378 aa11.14□□□□□ -0.63
CPSF4-202ENST00000412686 TRPM1Q7Z4N2 1603 aa11.13□□□□□ -0.63
CPSF4-202ENST00000412686 ADGRL3Q9HAR2 1447 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms