RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
RAB28P1-201ENST00000411517 BCORL1Q5H9F3 1711 aa9.11□□□□□ -0.95
RAB28P1-201ENST00000411517 ANO8Q9HCE9 1232 aaPredicted RBP9.1□□□□□ -0.95
RAB28P1-201ENST00000411517 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
RAB28P1-201ENST00000411517 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
RAB28P1-201ENST00000411517 CUL7Q14999 1698 aa9.08□□□□□ -0.96
RAB28P1-201ENST00000411517 MFSD10Q14728 455 aa9.08□□□□□ -0.96
RAB28P1-201ENST00000411517 SLC4A5Q9BY07 1137 aa9.08□□□□□ -0.96
RAB28P1-201ENST00000411517 EMILIN3Q9NT22 766 aa9.08□□□□□ -0.96
RAB28P1-201ENST00000411517 CADPS2Q86UW7 1296 aa9.07□□□□□ -0.96
RAB28P1-201ENST00000411517 WNT2BQ93097 391 aa9.07□□□□□ -0.96
RAB28P1-201ENST00000411517 RIMS1Q86UR5 1692 aaKnown RBP9.07□□□□□ -0.96
RAB28P1-201ENST00000411517 NBPF3Q9H094 633 aa9.06□□□□□ -0.96
RAB28P1-201ENST00000411517 BHMG1C9JSJ3 638 aaPredicted RBP9.05□□□□□ -0.96
RAB28P1-201ENST00000411517 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
RAB28P1-201ENST00000411517 YEATS2Q9ULM3 1422 aa9.05□□□□□ -0.96
RAB28P1-201ENST00000411517 PCDHGA10Q9Y5H3 936 aa9.04□□□□□ -0.96
RAB28P1-201ENST00000411517 CFAP43Q8NDM7 1665 aa9.04□□□□□ -0.96
RAB28P1-201ENST00000411517 ERICH3Q5RHP9 1530 aa9.03□□□□□ -0.96
RAB28P1-201ENST00000411517 MAGI3Q5TCQ9 1506 aa9.03□□□□□ -0.96
RAB28P1-201ENST00000411517 STRCQ7RTU9 1775 aa9.03□□□□□ -0.96
RAB28P1-201ENST00000411517 LTBP4Q8N2S1 1624 aa9.02□□□□□ -0.96
RAB28P1-201ENST00000411517 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
RAB28P1-201ENST00000411517 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.97
RAB28P1-201ENST00000411517 UHRF1BP1LA0JNW5 1464 aa9.02□□□□□ -0.97
RAB28P1-201ENST00000411517 PPP1R3GB7ZBB8 358 aa9.01□□□□□ -0.97
RAB28P1-201ENST00000411517 PTPRGP23470 1445 aa9.01□□□□□ -0.97
RAB28P1-201ENST00000411517 DPYSL4O14531 572 aa8.99□□□□□ -0.97
RAB28P1-201ENST00000411517 COL9A1P20849 921 aa8.99□□□□□ -0.97
RAB28P1-201ENST00000411517 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
RAB28P1-201ENST00000411517 PREX1Q8TCU6 1659 aa8.99□□□□□ -0.97
RAB28P1-201ENST00000411517 ARAP3Q8WWN8 1544 aa8.99□□□□□ -0.97
RAB28P1-201ENST00000411517 PHF14O94880 888 aa8.98□□□□□ -0.97
RAB28P1-201ENST00000411517 ANKK1Q8NFD2 765 aa8.98□□□□□ -0.97
RAB28P1-201ENST00000411517 PTPRTO14522 1441 aa8.97□□□□□ -0.97
RAB28P1-201ENST00000411517 KDM5BQ9UGL1 1544 aa8.97□□□□□ -0.97
RAB28P1-201ENST00000411517 RBM33Q96EV2 1170 aaKnown RBP8.97□□□□□ -0.97
RAB28P1-201ENST00000411517 RABGEF1Q9UJ41 708 aa8.97□□□□□ -0.97
RAB28P1-201ENST00000411517 ARID4BQ4LE39 1312 aaPredicted RBP8.96□□□□□ -0.98
RAB28P1-201ENST00000411517 CD109Q6YHK3 1445 aa8.96□□□□□ -0.98
RAB28P1-201ENST00000411517 ZCCHC11Q5TAX3 1644 aaKnown RBP8.95□□□□□ -0.98
RAB28P1-201ENST00000411517 UBAP1LF5GYI3 381 aa8.95□□□□□ -0.98
RAB28P1-201ENST00000411517 WDR7Q9Y4E6 1490 aa8.95□□□□□ -0.98
RAB28P1-201ENST00000411517 SRCAPQ6ZRS2 3230 aa8.94□□□□□ -0.98
RAB28P1-201ENST00000411517 BCAMP50895 628 aa8.94□□□□□ -0.98
RAB28P1-201ENST00000411517 DDX12PQ92771 950 aa8.94□□□□□ -0.98
RAB28P1-201ENST00000411517 EPAS1Q99814 870 aa8.94□□□□□ -0.98
RAB28P1-201ENST00000411517 KIAA1468Q9P260 1216 aa8.94□□□□□ -0.98
RAB28P1-201ENST00000411517 C6orf132Q5T0Z8 1188 aa8.93□□□□□ -0.98
RAB28P1-201ENST00000411517 SEPT9Q9UHD8 586 aaPredicted RBP8.93□□□□□ -0.98
RAB28P1-201ENST00000411517 TNIKQ9UKE5 1360 aa8.93□□□□□ -0.98
RAB28P1-201ENST00000411517 UACAQ9BZF9 1416 aa8.93□□□□□ -0.98
RAB28P1-201ENST00000411517 TTC37Q6PGP7 1564 aa8.92□□□□□ -0.98
RAB28P1-201ENST00000411517 WRNQ14191 1432 aaPredicted RBP eCLIP8.92□□□□□ -0.98
RAB28P1-201ENST00000411517 CAMK2BQ13554 666 aa8.92□□□□□ -0.98
RAB28P1-201ENST00000411517 BBXQ8WY36 941 aaPredicted RBP8.92□□□□□ -0.98
RAB28P1-201ENST00000411517 IRX2Q9BZI1 471 aaPredicted RBP8.91□□□□□ -0.98
RAB28P1-201ENST00000411517 A0A0G2JS52 829 aa8.9□□□□□ -0.98
RAB28P1-201ENST00000411517 HSPA1LP34931 641 aa8.9□□□□□ -0.98
RAB28P1-201ENST00000411517 FER1L4A9Z1Z3 1794 aa8.9□□□□□ -0.98
RAB28P1-201ENST00000411517 ARHGEF40Q8TER5 1519 aa8.9□□□□□ -0.99
RAB28P1-201ENST00000411517 CARMIL2Q6F5E8 1435 aa8.89□□□□□ -0.99
RAB28P1-201ENST00000411517 POGZQ7Z3K3 1410 aa8.89□□□□□ -0.99
RAB28P1-201ENST00000411517 TTBK1Q5TCY1 1321 aaPredicted RBP8.89□□□□□ -0.99
RAB28P1-201ENST00000411517 NBR1Q14596 966 aa8.89□□□□□ -0.99
RAB28P1-201ENST00000411517 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
RAB28P1-201ENST00000411517 LAPTM4BQ86VI4 370 aa8.89□□□□□ -0.99
RAB28P1-201ENST00000411517 ZFRQ96KR1 1074 aaKnown RBP8.89□□□□□ -0.99
RAB28P1-201ENST00000411517 PHLDB1Q86UU1 1377 aa8.88□□□□□ -0.99
RAB28P1-201ENST00000411517 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
RAB28P1-201ENST00000411517 MAP3K7O43318 606 aa8.88□□□□□ -0.99
RAB28P1-201ENST00000411517 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
RAB28P1-201ENST00000411517 FANCAO15360 1455 aa8.87□□□□□ -0.99
RAB28P1-201ENST00000411517 SETD1BQ9UPS6 1966 aaKnown RBP8.86□□□□□ -0.99
RAB28P1-201ENST00000411517 SPRYD3Q8NCJ5 442 aa8.86□□□□□ -0.99
RAB28P1-201ENST00000411517 WBP1LQ9NX94 342 aa8.86□□□□□ -0.99
RAB28P1-201ENST00000411517 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
RAB28P1-201ENST00000411517 UHRF1BP1Q6BDS2 1440 aa8.86□□□□□ -0.99
RAB28P1-201ENST00000411517 RGS20O76081 388 aa8.85□□□□□ -0.99
RAB28P1-201ENST00000411517 TSR1Q2NL82 804 aaKnown RBP8.85□□□□□ -0.99
RAB28P1-201ENST00000411517 FRMPD1Q5SYB0 1578 aa8.85□□□□□ -0.99
RAB28P1-201ENST00000411517 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
RAB28P1-201ENST00000411517 FAM98CQ17RN3 349 aaKnown RBP8.84□□□□□ -0.99
RAB28P1-201ENST00000411517 EN1Q05925 392 aaPredicted RBP8.83□□□□□ -1
RAB28P1-201ENST00000411517 LRCH3Q96II8 777 aa8.83□□□□□ -1
RAB28P1-201ENST00000411517 CFAP44Q96MT7 982 aa8.83□□□□□ -1
RAB28P1-201ENST00000411517 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
RAB28P1-201ENST00000411517 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
RAB28P1-201ENST00000411517 RAPGEF3O95398 923 aa8.82□□□□□ -1
RAB28P1-201ENST00000411517 PDIA6Q15084 440 aa8.82□□□□□ -1
RAB28P1-201ENST00000411517 PACS2Q86VP3 889 aa8.82□□□□□ -1
RAB28P1-201ENST00000411517 GRXCR2A6NFK2 248 aa8.81□□□□□ -1
RAB28P1-201ENST00000411517 ITGBL1O95965 494 aaPredicted RBP8.81□□□□□ -1
RAB28P1-201ENST00000411517 WDR70Q9NW82 654 aa8.81□□□□□ -1
RAB28P1-201ENST00000411517 RGS17Q9UGC6 210 aaPredicted RBP8.81□□□□□ -1
RAB28P1-201ENST00000411517 SPDYE16A6NNV3 312 aaPredicted RBP8.8□□□□□ -1
RAB28P1-201ENST00000411517 NYAP1Q6ZVC0 841 aa8.8□□□□□ -1
RAB28P1-201ENST00000411517 PAXIP1Q6ZW49 1069 aaPredicted RBP8.8□□□□□ -1
RAB28P1-201ENST00000411517 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
RAB28P1-201ENST00000411517 TSKSQ9UJT2 592 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms