RNA–Protein interactions for RNA: ENST00000410583.1

RN7SKP240-201, Transcript of RNA, 7SK small nuclear pseudogene 240, humanhuman

BASIC

Gene RN7SKP240, Length 375 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP240-201ENST00000410583 A2MP01023 1474 aa10.47□□□□□ -0.73
RN7SKP240-201ENST00000410583 CCDC18Q5T9S5 1454 aa10.47□□□□□ -0.73
RN7SKP240-201ENST00000410583 SHANK2Q9UPX8 1470 aa10.47□□□□□ -0.73
RN7SKP240-201ENST00000410583 PKD2Q13563 968 aa10.46□□□□□ -0.73
RN7SKP240-201ENST00000410583 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.73
RN7SKP240-201ENST00000410583 TRIM35Q9UPQ4 493 aa10.46□□□□□ -0.73
RN7SKP240-201ENST00000410583 DEPDC5O75140 1603 aa10.46□□□□□ -0.74
RN7SKP240-201ENST00000410583 XIRP1Q702N8 1843 aaKnown RBP10.45□□□□□ -0.74
RN7SKP240-201ENST00000410583 ZC3H13Q5T200 1668 aaKnown RBP10.45□□□□□ -0.74
RN7SKP240-201ENST00000410583 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
RN7SKP240-201ENST00000410583 PCDHB13Q9Y5F0 798 aa10.43□□□□□ -0.74
RN7SKP240-201ENST00000410583 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
RN7SKP240-201ENST00000410583 IER5LQ5T953 404 aa10.41□□□□□ -0.74
RN7SKP240-201ENST00000410583 TIAM1Q13009 1591 aa10.4□□□□□ -0.74
RN7SKP240-201ENST00000410583 FAM135AQ9P2D6 1515 aa10.4□□□□□ -0.74
RN7SKP240-201ENST00000410583 PZPP20742 1482 aa10.4□□□□□ -0.74
RN7SKP240-201ENST00000410583 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 LRRC7Q96NW7 1537 aa10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 GPATCH8Q9UKJ3 1502 aaKnown RBP10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 FYCO1Q9BQS8 1478 aa10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 TOM1O60784 492 aa10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 SLAIN1Q8ND83 568 aa10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 CASKIN1Q8WXD9 1431 aa10.39□□□□□ -0.75
RN7SKP240-201ENST00000410583 SPAG9O60271 1321 aaKnown RBP10.38□□□□□ -0.75
RN7SKP240-201ENST00000410583 MED14O60244 1454 aa10.38□□□□□ -0.75
RN7SKP240-201ENST00000410583 PLEKHH2Q8IVE3 1493 aa10.38□□□□□ -0.75
RN7SKP240-201ENST00000410583 SGIP1Q9BQI5 828 aa10.38□□□□□ -0.75
RN7SKP240-201ENST00000410583 NPHP4O75161 1426 aaPredicted RBP10.38□□□□□ -0.75
RN7SKP240-201ENST00000410583 TNRQ92752 1358 aa10.38□□□□□ -0.75
RN7SKP240-201ENST00000410583 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
RN7SKP240-201ENST00000410583 UBR1Q8IWV7 1749 aa10.37□□□□□ -0.75
RN7SKP240-201ENST00000410583 CEP152O94986 1710 aa10.36□□□□□ -0.75
RN7SKP240-201ENST00000410583 ST18O60284 1047 aa10.36□□□□□ -0.75
RN7SKP240-201ENST00000410583 ZNF777Q9ULD5 760 aaPredicted RBP10.36□□□□□ -0.75
RN7SKP240-201ENST00000410583 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.36□□□□□ -0.75
RN7SKP240-201ENST00000410583 NUBP1P53384 320 aa10.35□□□□□ -0.75
RN7SKP240-201ENST00000410583 GGT6Q6P531 493 aa10.35□□□□□ -0.75
RN7SKP240-201ENST00000410583 NLRP1Q9C000 1473 aa10.35□□□□□ -0.75
RN7SKP240-201ENST00000410583 ROBO1Q9Y6N7 1651 aa10.34□□□□□ -0.75
RN7SKP240-201ENST00000410583 KIAA1107Q9UPP5 1409 aa10.34□□□□□ -0.75
RN7SKP240-201ENST00000410583 TMEM106CQ9BVX2 250 aa10.34□□□□□ -0.75
RN7SKP240-201ENST00000410583 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
RN7SKP240-201ENST00000410583 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.76
RN7SKP240-201ENST00000410583 PLCG2P16885 1265 aa10.32□□□□□ -0.76
RN7SKP240-201ENST00000410583 MROH1Q8NDA8 1641 aa10.32□□□□□ -0.76
RN7SKP240-201ENST00000410583 EHBP1L1Q8N3D4 1523 aa10.32□□□□□ -0.76
RN7SKP240-201ENST00000410583 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
RN7SKP240-201ENST00000410583 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
RN7SKP240-201ENST00000410583 ABCC3O15438 1527 aa10.3□□□□□ -0.76
RN7SKP240-201ENST00000410583 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
RN7SKP240-201ENST00000410583 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
RN7SKP240-201ENST00000410583 MMRN1Q13201 1228 aa10.3□□□□□ -0.76
RN7SKP240-201ENST00000410583 PHLPP1O60346 1717 aa10.3□□□□□ -0.76
RN7SKP240-201ENST00000410583 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
RN7SKP240-201ENST00000410583 FBXO31Q5XUX0 539 aaPredicted RBP10.29□□□□□ -0.76
RN7SKP240-201ENST00000410583 ERVK-7P63135 1459 aa10.29□□□□□ -0.76
RN7SKP240-201ENST00000410583 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
RN7SKP240-201ENST00000410583 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
RN7SKP240-201ENST00000410583 IRX5P78411 483 aaPredicted RBP10.28□□□□□ -0.76
RN7SKP240-201ENST00000410583 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
RN7SKP240-201ENST00000410583 ZBTB47Q9UFB7 747 aaPredicted RBP10.28□□□□□ -0.76
RN7SKP240-201ENST00000410583 CAMSAP2Q08AD1 1489 aa10.28□□□□□ -0.76
RN7SKP240-201ENST00000410583 RTEL1-TNFRSF6BF6WH68 1400 aa10.27□□□□□ -0.77
RN7SKP240-201ENST00000410583 MIA2Q96PC5 1412 aa10.27□□□□□ -0.77
RN7SKP240-201ENST00000410583 SCAF11Q99590 1463 aaKnown RBP10.27□□□□□ -0.77
RN7SKP240-201ENST00000410583 PIK3C2BO00750 1634 aa10.26□□□□□ -0.77
RN7SKP240-201ENST00000410583 POTEAQ6S8J7 498 aa10.26□□□□□ -0.77
RN7SKP240-201ENST00000410583 ANKLE2Q86XL3 938 aa10.26□□□□□ -0.77
RN7SKP240-201ENST00000410583 CFAP65Q6ZU64 1925 aaKnown RBP10.26□□□□□ -0.77
RN7SKP240-201ENST00000410583 NWD1Q149M9 1564 aa10.26□□□□□ -0.77
RN7SKP240-201ENST00000410583 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
RN7SKP240-201ENST00000410583 NCOA2Q15596 1464 aa10.25□□□□□ -0.77
RN7SKP240-201ENST00000410583 SLIT1O75093 1534 aa10.25□□□□□ -0.77
RN7SKP240-201ENST00000410583 CFDP1Q9UEE9 299 aaPredicted RBP10.25□□□□□ -0.77
RN7SKP240-201ENST00000410583 ARHGEF5Q12774 1597 aa10.25□□□□□ -0.77
RN7SKP240-201ENST00000410583 COL16A1Q07092 1604 aaPredicted RBP10.25□□□□□ -0.77
RN7SKP240-201ENST00000410583 ARHGAP23Q9P227 1491 aa10.24□□□□□ -0.77
RN7SKP240-201ENST00000410583 SPNS2Q8IVW8 549 aa10.24□□□□□ -0.77
RN7SKP240-201ENST00000410583 LRRC9Q6ZRR7 1453 aa10.23□□□□□ -0.77
RN7SKP240-201ENST00000410583 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
RN7SKP240-201ENST00000410583 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
RN7SKP240-201ENST00000410583 LRP6O75581 1613 aa10.22□□□□□ -0.77
RN7SKP240-201ENST00000410583 KIF3BO15066 747 aa10.22□□□□□ -0.77
RN7SKP240-201ENST00000410583 MTUS2Q5JR59 1369 aa10.22□□□□□ -0.77
RN7SKP240-201ENST00000410583 PRDM15P57071 1507 aaPredicted RBP10.22□□□□□ -0.77
RN7SKP240-201ENST00000410583 KDM5AP29375 1690 aaKnown RBP10.22□□□□□ -0.77
RN7SKP240-201ENST00000410583 SHPRHQ149N8 1683 aa10.22□□□□□ -0.77
RN7SKP240-201ENST00000410583 THEMISQ8N1K5 641 aaPredicted RBP10.21□□□□□ -0.77
RN7SKP240-201ENST00000410583 FAM135BQ49AJ0 1406 aa10.21□□□□□ -0.78
RN7SKP240-201ENST00000410583 CROCC2H7BZ55 1655 aa10.21□□□□□ -0.78
RN7SKP240-201ENST00000410583 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
RN7SKP240-201ENST00000410583 WASHC2CQ9Y4E1 1318 aa10.19□□□□□ -0.78
RN7SKP240-201ENST00000410583 PYGBP11216 843 aa10.19□□□□□ -0.78
RN7SKP240-201ENST00000410583 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
RN7SKP240-201ENST00000410583 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
RN7SKP240-201ENST00000410583 NKTRP30414 1462 aaKnown RBP10.18□□□□□ -0.78
RN7SKP240-201ENST00000410583 TMEM94Q12767 1356 aa10.17□□□□□ -0.78
RN7SKP240-201ENST00000410583 MYO5BQ9ULV0 1848 aa10.17□□□□□ -0.78
RN7SKP240-201ENST00000410583 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms