RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 CC2D1BQ5T0F9 858 aaKnown RBP7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 TRMT2AQ8IZ69 625 aaKnown RBP7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 GBP4Q96PP9 640 aa7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 COL17A1Q9UMD9 1497 aaPredicted RBP7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 HS1BP3Q53T59 392 aa7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 RIPK4P57078 832 aa7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 HSCBQ8IWL3 235 aa7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 KIAA0586Q9BVV6 1533 aa7.37□□□□□ -1.23
R3HDM1-202ENST00000409478 UTP14CQ5TAP6 766 aaKnown RBP7.36□□□□□ -1.23
R3HDM1-202ENST00000409478 TOPBP1Q92547 1522 aa7.36□□□□□ -1.23
R3HDM1-202ENST00000409478 CIZ1Q9ULV3 898 aaPredicted RBP7.36□□□□□ -1.23
R3HDM1-202ENST00000409478 ADGRL2O95490 1459 aa7.36□□□□□ -1.23
R3HDM1-202ENST00000409478 RAD54L2Q9Y4B4 1467 aa7.36□□□□□ -1.23
R3HDM1-202ENST00000409478 TDRD9Q8NDG6 1382 aaKnown RBP7.36□□□□□ -1.23
R3HDM1-202ENST00000409478 CAMSAP2Q08AD1 1489 aa7.36□□□□□ -1.23
R3HDM1-202ENST00000409478 NGEFQ8N5V2 710 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 FAM13BQ9NYF5 915 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 CEP170Q5SW79 1584 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 POLA1P09884 1462 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 E9PSI1 815 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 DYNC1I1O14576 645 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 CHMP7Q8WUX9 453 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 NCOA3Q9Y6Q9 1424 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 IBTKQ9P2D0 1353 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 PLXNC1O60486 1568 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 NASPP49321 788 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 SPRYD3Q8NCJ5 442 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 CSPP1Q1MSJ5 1256 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 C22orf23Q9BZE7 217 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 LAMC1P11047 1609 aa7.35□□□□□ -1.23
R3HDM1-202ENST00000409478 CDK13Q14004 1512 aaKnown RBP7.34□□□□□ -1.23
R3HDM1-202ENST00000409478 CANXP27824 592 aaKnown RBP7.34□□□□□ -1.23
R3HDM1-202ENST00000409478 GAS2L3Q86XJ1 694 aa7.34□□□□□ -1.23
R3HDM1-202ENST00000409478 ZNF692Q9BU19 519 aaPredicted RBP7.34□□□□□ -1.23
R3HDM1-202ENST00000409478 PANK3Q9H999 370 aa7.34□□□□□ -1.23
R3HDM1-202ENST00000409478 TRPM1Q7Z4N2 1603 aa7.34□□□□□ -1.24
R3HDM1-202ENST00000409478 WDR62O43379 1518 aa7.34□□□□□ -1.24
R3HDM1-202ENST00000409478 ZNF500O60304 480 aaPredicted RBP7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 DDIT3P35638 169 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 TNNT2P45379 298 aaPredicted RBP7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 ABCC2Q92887 1545 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 GPRASP1Q5JY77 1395 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 BCAR3O75815 825 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 R3HCC1Q9Y3T6 440 aaKnown RBP7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 KDM5DQ9BY66 1539 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 UQCRHLA0A096LP55 91 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 UQCRHP07919 91 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 KDM2AQ9Y2K7 1162 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 RTEL1-TNFRSF6BF6WH68 1400 aa7.33□□□□□ -1.24
R3HDM1-202ENST00000409478 GOLGA6L22H0YM25 854 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 DMTNQ08495 405 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 RWDD1Q9H446 243 aaPredicted RBP7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 PRAG1Q86YV5 1406 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 MCM5P33992 734 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 TNPO1Q92973 898 aaKnown RBP7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 SNX21Q969T3 373 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 NOL7Q9UMY1 257 aaKnown RBP7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 TMF1P82094 1093 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 PDE4CQ08493 712 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 SMC5Q8IY18 1101 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 PIK3C2GO75747 1445 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 ERBINQ96RT1 1412 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 PRDM15P57071 1507 aaPredicted RBP7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 PPP2R1AP30153 589 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 RAB3GAP1Q15042 981 aa7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 EIF4G3O43432 1585 aaKnown RBP7.32□□□□□ -1.24
R3HDM1-202ENST00000409478 CROCC2H7BZ55 1655 aa7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 ANKRD50Q9ULJ7 1429 aa7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 URB2Q14146 1524 aaKnown RBP7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 CCDC94Q9BW85 323 aaPredicted RBP7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 PDZRN3Q9UPQ7 1066 aa7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 COG6Q9Y2V7 657 aa7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 DISP3Q9P2K9 1392 aa7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 ITSN2Q9NZM3 1697 aa7.31□□□□□ -1.24
R3HDM1-202ENST00000409478 ZNF644Q9H582 1327 aaPredicted RBP7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 NUP155O75694 1391 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 MFAP1P55081 439 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 SASS6Q6UVJ0 657 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 KNSTRNQ9Y448 316 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 KIF20AO95235 890 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 KLHL40Q2TBA0 621 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 PANK1Q8TE04 598 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 TESK2Q96S53 571 aa7.3□□□□□ -1.24
R3HDM1-202ENST00000409478 EIF2AK4Q9P2K8 1649 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-202ENST00000409478 HSP90AB1P08238 724 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-202ENST00000409478 RBM25P49756 843 aaKnown RBP7.29□□□□□ -1.24
R3HDM1-202ENST00000409478 CLEC17AQ6ZS10 378 aa7.29□□□□□ -1.24
R3HDM1-202ENST00000409478 ZHX1Q9UKY1 873 aaPredicted RBP7.29□□□□□ -1.24
R3HDM1-202ENST00000409478 ZNF445P59923 1031 aa7.28□□□□□ -1.24
R3HDM1-202ENST00000409478 SPINK5Q9NQ38 1064 aaPredicted RBP7.28□□□□□ -1.24
R3HDM1-202ENST00000409478 ARHGAP31Q2M1Z3 1444 aa7.28□□□□□ -1.24
R3HDM1-202ENST00000409478 ABCC10Q5T3U5 1492 aa7.28□□□□□ -1.24
R3HDM1-202ENST00000409478 ZKSCAN5Q9Y2L8 839 aa7.28□□□□□ -1.24
R3HDM1-202ENST00000409478 PDLIM2Q96JY6 352 aa7.28□□□□□ -1.24
R3HDM1-202ENST00000409478 IQGAP2Q13576 1575 aa7.27□□□□□ -1.24
R3HDM1-202ENST00000409478 PTPRGP23470 1445 aa7.27□□□□□ -1.24
R3HDM1-202ENST00000409478 LETM1O95202 739 aaPredicted RBP7.27□□□□□ -1.24
R3HDM1-202ENST00000409478 PCDHB15Q9Y5E8 787 aa7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms