RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 ZNF335Q9H4Z2 1342 aaPredicted RBP30.75■■■□□ 2.51
C4orf48-201ENST00000409248 HDGFP51858 240 aaKnown RBP30.75■■■□□ 2.51
C4orf48-201ENST00000409248 CERKQ8TCT0 537 aa30.73■■■□□ 2.51
C4orf48-201ENST00000409248 HRCP23327 699 aa30.72■■■□□ 2.51
C4orf48-201ENST00000409248 PPP1R15AO75807 674 aaPredicted RBP30.71■■■□□ 2.51
C4orf48-201ENST00000409248 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.71■■■□□ 2.51
C4orf48-201ENST00000409248 CPS1P31327 1500 aa30.7■■■□□ 2.51
C4orf48-201ENST00000409248 IQSEC2Q5JU85 1478 aa30.69■■■□□ 2.5
C4orf48-201ENST00000409248 FOXD1Q16676 465 aa30.68■■■□□ 2.5
C4orf48-201ENST00000409248 PLEKHG1Q9ULL1 1385 aa30.67■■■□□ 2.5
C4orf48-201ENST00000409248 CCDC144AA2RUR9 1427 aa30.67■■■□□ 2.5
C4orf48-201ENST00000409248 ZNF326Q5BKZ1 582 aaKnown RBP30.64■■■□□ 2.5
C4orf48-201ENST00000409248 NEXMIFQ5QGS0 1516 aa30.62■■■□□ 2.49
C4orf48-201ENST00000409248 BCANQ96GW7 911 aa30.61■■■□□ 2.49
C4orf48-201ENST00000409248 DIP2AQ14689 1571 aa30.61■■■□□ 2.49
C4orf48-201ENST00000409248 STRCP1A6NGW2 1772 aa30.59■■■□□ 2.49
C4orf48-201ENST00000409248 FBXO41Q8TF61 875 aa30.58■■■□□ 2.49
C4orf48-201ENST00000409248 NUTM2DQ5VT03 806 aaPredicted RBP30.55■■■□□ 2.48
C4orf48-201ENST00000409248 SLC26A8Q96RN1 970 aa30.55■■■□□ 2.48
C4orf48-201ENST00000409248 SETBP1Q9Y6X0 1596 aa30.54■■■□□ 2.48
C4orf48-201ENST00000409248 PPLO60437 1756 aa30.54■■■□□ 2.48
C4orf48-201ENST00000409248 NWD1Q149M9 1564 aa30.53■■■□□ 2.48
C4orf48-201ENST00000409248 RPGRIP1LQ68CZ1 1315 aa30.51■■■□□ 2.48
C4orf48-201ENST00000409248 SPATA31E1Q6ZUB1 1445 aa30.5■■■□□ 2.47
C4orf48-201ENST00000409248 ADAMTS13Q76LX8 1427 aa30.5■■■□□ 2.47
C4orf48-201ENST00000409248 NRXN3Q9Y4C0 1643 aa30.5■■■□□ 2.47
C4orf48-201ENST00000409248 ILDR1Q86SU0 546 aaPredicted RBP30.49■■■□□ 2.47
C4orf48-201ENST00000409248 SENP3Q9H4L4 574 aaPredicted RBP30.48■■■□□ 2.47
C4orf48-201ENST00000409248 TBX22Q9Y458 520 aa30.48■■■□□ 2.47
C4orf48-201ENST00000409248 NKTRP30414 1462 aaKnown RBP30.48■■■□□ 2.47
C4orf48-201ENST00000409248 LRRC7Q96NW7 1537 aa30.47■■■□□ 2.47
C4orf48-201ENST00000409248 CHD2O14647 1828 aaKnown RBP30.47■■■□□ 2.47
C4orf48-201ENST00000409248 ANKRD30BQ9BXX2 1392 aa30.46■■■□□ 2.47
C4orf48-201ENST00000409248 IFT172Q9UG01 1749 aa30.46■■■□□ 2.47
C4orf48-201ENST00000409248 PIK3R4Q99570 1358 aa30.45■■■□□ 2.47
C4orf48-201ENST00000409248 VGFO15240 615 aaPredicted RBP30.45■■■□□ 2.47
C4orf48-201ENST00000409248 KCNA6P17658 529 aa30.45■■■□□ 2.47
C4orf48-201ENST00000409248 RGL3Q3MIN7 710 aa30.38■■■□□ 2.45
C4orf48-201ENST00000409248 XIRP1Q702N8 1843 aaKnown RBP30.37■■■□□ 2.45
C4orf48-201ENST00000409248 SETD1AO15047 1707 aaKnown RBP30.34■■■□□ 2.45
C4orf48-201ENST00000409248 XRN1Q8IZH2 1706 aaKnown RBP30.34■■■□□ 2.45
C4orf48-201ENST00000409248 UBAP1LF5GYI3 381 aa30.34■■■□□ 2.45
C4orf48-201ENST00000409248 TMEM94Q12767 1356 aa30.32■■■□□ 2.44
C4orf48-201ENST00000409248 ALKQ9UM73 1620 aa30.32■■■□□ 2.44
C4orf48-201ENST00000409248 MYOM2P54296 1465 aa30.31■■■□□ 2.44
C4orf48-201ENST00000409248 PROSER2Q86WR7 435 aaPredicted RBP30.31■■■□□ 2.44
C4orf48-201ENST00000409248 DHX57Q6P158 1386 aaKnown RBP30.29■■■□□ 2.44
C4orf48-201ENST00000409248 METP08581 1390 aa30.28■■■□□ 2.44
C4orf48-201ENST00000409248 TOM1O60784 492 aa30.28■■■□□ 2.44
C4orf48-201ENST00000409248 PTPRUQ92729 1446 aa30.28■■■□□ 2.44
C4orf48-201ENST00000409248 ADGRF5Q8IZF2 1346 aa30.26■■■□□ 2.44
C4orf48-201ENST00000409248 PIK3C2GO75747 1445 aa30.26■■■□□ 2.43
C4orf48-201ENST00000409248 AMOTL2Q9Y2J4 779 aa30.25■■■□□ 2.43
C4orf48-201ENST00000409248 LAMC1P11047 1609 aa30.25■■■□□ 2.43
C4orf48-201ENST00000409248 NCOA3Q9Y6Q9 1424 aa30.23■■■□□ 2.43
C4orf48-201ENST00000409248 NRXN1Q9ULB1 1477 aa30.23■■■□□ 2.43
C4orf48-201ENST00000409248 MSH6P52701 1360 aa30.21■■■□□ 2.43
C4orf48-201ENST00000409248 PTCH1Q13635 1447 aa30.18■■■□□ 2.42
C4orf48-201ENST00000409248 PRAG1Q86YV5 1406 aa30.18■■■□□ 2.42
C4orf48-201ENST00000409248 RBM33Q96EV2 1170 aaKnown RBP30.17■■■□□ 2.42
C4orf48-201ENST00000409248 SCAF1Q9H7N4 1312 aaKnown RBP30.17■■■□□ 2.42
C4orf48-201ENST00000409248 C14orf37Q86TY3 774 aa30.15■■■□□ 2.42
C4orf48-201ENST00000409248 STAC3Q96MF2 364 aa30.15■■■□□ 2.42
C4orf48-201ENST00000409248 PIP4K2BP78356 416 aa30.14■■■□□ 2.42
C4orf48-201ENST00000409248 ASXL1Q8IXJ9 1541 aa30.13■■■□□ 2.41
C4orf48-201ENST00000409248 KNDC1Q76NI1 1749 aa30.12■■■□□ 2.41
C4orf48-201ENST00000409248 DCAF11Q8TEB1 546 aa30.11■■■□□ 2.41
C4orf48-201ENST00000409248 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.1■■■□□ 2.41
C4orf48-201ENST00000409248 DCCP43146 1447 aa30.08■■■□□ 2.41
C4orf48-201ENST00000409248 TECPR2O15040 1411 aa30.07■■■□□ 2.4
C4orf48-201ENST00000409248 LRPPRCP42704 1394 aaKnown RBP30.07■■■□□ 2.4
C4orf48-201ENST00000409248 CCER1Q8TC90 406 aaPredicted RBP30.07■■■□□ 2.4
C4orf48-201ENST00000409248 C14orf93Q9H972 538 aaKnown RBP30.07■■■□□ 2.4
C4orf48-201ENST00000409248 NALCNQ8IZF0 1738 aa30.07■■■□□ 2.4
C4orf48-201ENST00000409248 ADGRL3Q9HAR2 1447 aa30.06■■■□□ 2.4
C4orf48-201ENST00000409248 C19orf44Q9H6X5 657 aa30.06■■■□□ 2.4
C4orf48-201ENST00000409248 KDM2AQ9Y2K7 1162 aa30.06■■■□□ 2.4
C4orf48-201ENST00000409248 ROBO2Q9HCK4 1378 aa30.05■■■□□ 2.4
C4orf48-201ENST00000409248 YTHDC2Q9H6S0 1430 aaKnown RBP30.04■■■□□ 2.4
C4orf48-201ENST00000409248 CADPS2Q86UW7 1296 aa30.03■■■□□ 2.4
C4orf48-201ENST00000409248 CLSPNQ9HAW4 1339 aa30.02■■■□□ 2.4
C4orf48-201ENST00000409248 ATF3P18847 181 aa30.02■■■□□ 2.4
C4orf48-201ENST00000409248 CFAP70Q5T0N1 1121 aa30.02■■■□□ 2.4
C4orf48-201ENST00000409248 ABCC11Q96J66 1382 aa30.02■■■□□ 2.4
C4orf48-201ENST00000409248 ROBO1Q9Y6N7 1651 aa30.01■■■□□ 2.39
C4orf48-201ENST00000409248 FAM135BQ49AJ0 1406 aa30■■■□□ 2.39
C4orf48-201ENST00000409248 TMEM132EQ6IEE7 984 aa30■■■□□ 2.39
C4orf48-201ENST00000409248 ADGRB1O14514 1584 aa29.98■■■□□ 2.39
C4orf48-201ENST00000409248 STK26Q9P289 416 aa29.98■■■□□ 2.39
C4orf48-201ENST00000409248 KIAA1210Q9ULL0 1709 aa29.98■■■□□ 2.39
C4orf48-201ENST00000409248 SIN3AQ96ST3 1273 aa29.97■■■□□ 2.39
C4orf48-201ENST00000409248 SLAIN2Q9P270 581 aa29.96■■■□□ 2.39
C4orf48-201ENST00000409248 NEUROD1Q13562 356 aa29.94■■■□□ 2.38
C4orf48-201ENST00000409248 DLC1Q96QB1 1528 aa29.94■■■□□ 2.38
C4orf48-201ENST00000409248 HSPA1LP34931 641 aa29.93■■■□□ 2.38
C4orf48-201ENST00000409248 CDC42BPGQ6DT37 1551 aa29.93■■■□□ 2.38
C4orf48-201ENST00000409248 MST1RQ04912 1400 aa29.89■■■□□ 2.38
C4orf48-201ENST00000409248 L3MBTL2Q969R5 705 aa29.89■■■□□ 2.38
C4orf48-201ENST00000409248 SIRT1Q96EB6 747 aa29.89■■■□□ 2.38
C4orf48-201ENST00000409248 WAPLQ7Z5K2 1190 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms