RNA–Protein interactions for RNA: ENST00000407684.1

GAREM2-202, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 2 BASIC

Gene GAREM2, Length 5,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-202ENST00000407684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.3■■□□□ 1.16
GAREM2-202ENST00000407684 CNTLNQ9NXG0 1405 aa22.3■■□□□ 1.16
GAREM2-202ENST00000407684 THEMISQ8N1K5 641 aaPredicted RBP22.29■■□□□ 1.16
GAREM2-202ENST00000407684 NGDNQ8NEJ9 315 aaKnown RBP22.29■■□□□ 1.16
GAREM2-202ENST00000407684 CGNL1Q0VF96 1302 aa22.28■■□□□ 1.16
GAREM2-202ENST00000407684 TXNDC2Q86VQ3 553 aa22.28■■□□□ 1.16
GAREM2-202ENST00000407684 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
GAREM2-202ENST00000407684 FAM135AQ9P2D6 1515 aa22.26■■□□□ 1.15
GAREM2-202ENST00000407684 SOX12O15370 315 aa22.26■■□□□ 1.15
GAREM2-202ENST00000407684 GOLGA6L22H0YM25 854 aa22.26■■□□□ 1.15
GAREM2-202ENST00000407684 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
GAREM2-202ENST00000407684 CASC1Q6TDU7 716 aa22.25■■□□□ 1.15
GAREM2-202ENST00000407684 ARHGEF5Q12774 1597 aa22.24■■□□□ 1.15
GAREM2-202ENST00000407684 MYO5CQ9NQX4 1742 aa22.24■■□□□ 1.15
GAREM2-202ENST00000407684 NEO1Q92859 1461 aa22.23■■□□□ 1.15
GAREM2-202ENST00000407684 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
GAREM2-202ENST00000407684 NUTM2FA1L443 756 aa22.22■■□□□ 1.15
GAREM2-202ENST00000407684 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
GAREM2-202ENST00000407684 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
GAREM2-202ENST00000407684 ATP7AQ04656 1500 aa22.2■■□□□ 1.14
GAREM2-202ENST00000407684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.2■■□□□ 1.14
GAREM2-202ENST00000407684 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
GAREM2-202ENST00000407684 NCLP19338 710 aaKnown RBP22.2■■□□□ 1.14
GAREM2-202ENST00000407684 IDI1Q13907 227 aa22.18■■□□□ 1.14
GAREM2-202ENST00000407684 MBD5Q9P267 1494 aa22.17■■□□□ 1.14
GAREM2-202ENST00000407684 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
GAREM2-202ENST00000407684 CFAP74Q9C0B2 1584 aa22.16■■□□□ 1.14
GAREM2-202ENST00000407684 PZPP20742 1482 aa22.15■■□□□ 1.14
GAREM2-202ENST00000407684 ADGBQ8N7X0 1667 aa22.15■■□□□ 1.14
GAREM2-202ENST00000407684 PRAM1Q96QH2 718 aa22.15■■□□□ 1.14
GAREM2-202ENST00000407684 ANO8Q9HCE9 1232 aaPredicted RBP22.14■■□□□ 1.14
GAREM2-202ENST00000407684 TTC37Q6PGP7 1564 aa22.14■■□□□ 1.13
GAREM2-202ENST00000407684 COG3Q96JB2 828 aa22.13■■□□□ 1.13
GAREM2-202ENST00000407684 CABP2Q9NPB3 220 aa22.13■■□□□ 1.13
GAREM2-202ENST00000407684 PREX2Q70Z35 1606 aa22.13■■□□□ 1.13
GAREM2-202ENST00000407684 GCC2Q8IWJ2 1684 aa22.12■■□□□ 1.13
GAREM2-202ENST00000407684 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
GAREM2-202ENST00000407684 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.11■■□□□ 1.13
GAREM2-202ENST00000407684 PTMAP06454 111 aaKnown RBP22.1■■□□□ 1.13
GAREM2-202ENST00000407684 ANKLE2Q86XL3 938 aa22.1■■□□□ 1.13
GAREM2-202ENST00000407684 ADCY10Q96PN6 1610 aa22.1■■□□□ 1.13
GAREM2-202ENST00000407684 ADGRF5Q8IZF2 1346 aa22.1■■□□□ 1.13
GAREM2-202ENST00000407684 RCAN3Q9UKA8 241 aa22.09■■□□□ 1.13
GAREM2-202ENST00000407684 NAP1L5Q96NT1 182 aaPredicted RBP22.08■■□□□ 1.13
GAREM2-202ENST00000407684 MSH5O43196 834 aa22.08■■□□□ 1.12
GAREM2-202ENST00000407684 CALD1Q05682 793 aaKnown RBP22.08■■□□□ 1.12
GAREM2-202ENST00000407684 NOS1P29475 1434 aa22.07■■□□□ 1.12
GAREM2-202ENST00000407684 PDE3BQ13370 1112 aa22.07■■□□□ 1.12
GAREM2-202ENST00000407684 ATP10AO60312 1499 aa22.07■■□□□ 1.12
GAREM2-202ENST00000407684 ABCC1P33527 1531 aa22.06■■□□□ 1.12
GAREM2-202ENST00000407684 AMPHP49418 695 aa22.05■■□□□ 1.12
GAREM2-202ENST00000407684 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
GAREM2-202ENST00000407684 TNRQ92752 1358 aa22.04■■□□□ 1.12
GAREM2-202ENST00000407684 MAST1Q9Y2H9 1570 aa22.04■■□□□ 1.12
GAREM2-202ENST00000407684 DNTTIP2Q5QJE6 756 aaKnown RBP22.03■■□□□ 1.12
GAREM2-202ENST00000407684 OS9Q13438 667 aaPredicted RBP22.02■■□□□ 1.12
GAREM2-202ENST00000407684 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
GAREM2-202ENST00000407684 SHROOM2Q13796 1616 aa22.02■■□□□ 1.12
GAREM2-202ENST00000407684 SCAF11Q99590 1463 aaKnown RBP22.02■■□□□ 1.12
GAREM2-202ENST00000407684 SLC26A8Q96RN1 970 aa22.02■■□□□ 1.12
GAREM2-202ENST00000407684 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
GAREM2-202ENST00000407684 CEBPAP49715 358 aaPredicted RBP22.01■■□□□ 1.11
GAREM2-202ENST00000407684 HSP90AB1P08238 724 aaKnown RBP22.01■■□□□ 1.11
GAREM2-202ENST00000407684 GOLGA2Q08379 1002 aa22.01■■□□□ 1.11
GAREM2-202ENST00000407684 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
GAREM2-202ENST00000407684 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
GAREM2-202ENST00000407684 RALGAPBQ86X10 1494 aa22.01■■□□□ 1.11
GAREM2-202ENST00000407684 CDK19Q9BWU1 502 aa22.01■■□□□ 1.11
GAREM2-202ENST00000407684 TPRNQ4KMQ1 711 aa22■■□□□ 1.11
GAREM2-202ENST00000407684 ARHGEF12Q9NZN5 1544 aa22■■□□□ 1.11
GAREM2-202ENST00000407684 ATAD2Q6PL18 1390 aa22■■□□□ 1.11
GAREM2-202ENST00000407684 IPO8O15397 1037 aaKnown RBP22■■□□□ 1.11
GAREM2-202ENST00000407684 SLC12A5Q9H2X9 1139 aa21.98■■□□□ 1.11
GAREM2-202ENST00000407684 PRAG1Q86YV5 1406 aa21.98■■□□□ 1.11
GAREM2-202ENST00000407684 ZBED9Q6R2W3 1325 aa21.97■■□□□ 1.11
GAREM2-202ENST00000407684 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
GAREM2-202ENST00000407684 PSME1Q06323 249 aa21.97■■□□□ 1.11
GAREM2-202ENST00000407684 CSB-PGBD3P0DP91 1061 aa21.97■■□□□ 1.11
GAREM2-202ENST00000407684 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
GAREM2-202ENST00000407684 ATF3P18847 181 aa21.96■■□□□ 1.11
GAREM2-202ENST00000407684 NGEFQ8N5V2 710 aa21.96■■□□□ 1.11
GAREM2-202ENST00000407684 GGNBP2Q9H3C7 697 aa21.95■■□□□ 1.11
GAREM2-202ENST00000407684 ZFYVE16Q7Z3T8 1539 aa21.95■■□□□ 1.1
GAREM2-202ENST00000407684 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
GAREM2-202ENST00000407684 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
GAREM2-202ENST00000407684 HSCBQ8IWL3 235 aa21.94■■□□□ 1.1
GAREM2-202ENST00000407684 PROSER2Q86WR7 435 aaPredicted RBP21.94■■□□□ 1.1
GAREM2-202ENST00000407684 IPO9Q96P70 1041 aaKnown RBP21.94■■□□□ 1.1
GAREM2-202ENST00000407684 C11orf95C9JLR9 678 aaPredicted RBP21.93■■□□□ 1.1
GAREM2-202ENST00000407684 TCERG1O14776 1098 aaKnown RBP21.93■■□□□ 1.1
GAREM2-202ENST00000407684 ZNF692Q9BU19 519 aaPredicted RBP21.93■■□□□ 1.1
GAREM2-202ENST00000407684 CFAP44Q96MT7 982 aa21.93■■□□□ 1.1
GAREM2-202ENST00000407684 ZRSR1Q15695 479 aaKnown RBP21.92■■□□□ 1.1
GAREM2-202ENST00000407684 CABP1Q9NZU7 370 aa21.92■■□□□ 1.1
GAREM2-202ENST00000407684 NPHP1O15259 732 aa21.92■■□□□ 1.1
GAREM2-202ENST00000407684 EIF2AK4Q9P2K8 1649 aaKnown RBP21.91■■□□□ 1.1
GAREM2-202ENST00000407684 PPP2R1AP30153 589 aa21.91■■□□□ 1.1
GAREM2-202ENST00000407684 ZMYM3Q14202 1370 aa21.9■■□□□ 1.1
GAREM2-202ENST00000407684 MAGI2Q86UL8 1455 aa21.89■■□□□ 1.09
GAREM2-202ENST00000407684 KCNJ4P48050 445 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms